RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 SNX13Q9Y5W8 968 aa4.75□□□□□ -1.65
PCNX4-206ENST00000553513 A0A087X1B8 175 aa4.74□□□□□ -1.65
PCNX4-206ENST00000553513 CXorf49A8MYA2 514 aaPredicted RBP4.74□□□□□ -1.65
PCNX4-206ENST00000553513 F5H423 210 aaPredicted RBP4.74□□□□□ -1.65
PCNX4-206ENST00000553513 SLC16A6O15403 523 aa4.74□□□□□ -1.65
PCNX4-206ENST00000553513 SUV39H1O43463 412 aa4.74□□□□□ -1.65
PCNX4-206ENST00000553513 SH3BP5O60239 455 aa4.74□□□□□ -1.65
PCNX4-206ENST00000553513 TCEA3O75764 348 aa4.74□□□□□ -1.65
PCNX4-206ENST00000553513 HRGP04196 525 aa4.74□□□□□ -1.65
PCNX4-206ENST00000553513 SETSIPP0DME0 302 aa4.74□□□□□ -1.65
PCNX4-206ENST00000553513 ALOX15P16050 662 aaPredicted RBP4.74□□□□□ -1.65
PCNX4-206ENST00000553513 PEX2P28328 305 aa4.74□□□□□ -1.65
PCNX4-206ENST00000553513 RNASE9P60153 205 aaKnown RBP4.74□□□□□ -1.65
PCNX4-206ENST00000553513 GPSM2P81274 684 aa4.74□□□□□ -1.65
PCNX4-206ENST00000553513 PPP3CAQ08209 521 aa4.74□□□□□ -1.65
PCNX4-206ENST00000553513 MGAT2Q10469 447 aa4.74□□□□□ -1.65
PCNX4-206ENST00000553513 CNN3Q15417 329 aaKnown RBP4.74□□□□□ -1.65
PCNX4-206ENST00000553513 CSRP2Q16527 193 aa4.74□□□□□ -1.65
PCNX4-206ENST00000553513 ATXN7L2Q5T6C5 722 aaPredicted RBP4.74□□□□□ -1.65
PCNX4-206ENST00000553513 NPNTQ6UXI9 565 aa4.74□□□□□ -1.65
PCNX4-206ENST00000553513 TOGARAM2Q6ZUX3 1019 aa4.74□□□□□ -1.65
PCNX4-206ENST00000553513 RHOT1Q8IXI2 618 aa4.74□□□□□ -1.65
PCNX4-206ENST00000553513 LRTOMTQ8WZ04 291 aa4.74□□□□□ -1.65
PCNX4-206ENST00000553513 MYEOVQ96EZ4 313 aa4.74□□□□□ -1.65
PCNX4-206ENST00000553513 CCDC138Q96M89 665 aa4.74□□□□□ -1.65
PCNX4-206ENST00000553513 SENP6Q9GZR1 1112 aaPredicted RBP4.74□□□□□ -1.65
PCNX4-206ENST00000553513 IKZF4Q9H2S9 585 aa4.74□□□□□ -1.65
PCNX4-206ENST00000553513 ZNF768Q9H5H4 540 aaKnown RBP4.74□□□□□ -1.65
PCNX4-206ENST00000553513 MANSC1Q9H8J5 431 aa4.74□□□□□ -1.65
PCNX4-206ENST00000553513 AKIP1Q9NQ31 210 aa4.74□□□□□ -1.65
PCNX4-206ENST00000553513 RHPN2P1A8MT19 583 aa4.73□□□□□ -1.65
PCNX4-206ENST00000553513 TEX33O43247 280 aa4.73□□□□□ -1.65
PCNX4-206ENST00000553513 RAMP2O60895 175 aa4.73□□□□□ -1.65
PCNX4-206ENST00000553513 NCR1O76036 304 aa4.73□□□□□ -1.65
PCNX4-206ENST00000553513 ARIH2O95376 493 aa4.73□□□□□ -1.65
PCNX4-206ENST00000553513 ZKSCAN1P17029 563 aaPredicted RBP4.73□□□□□ -1.65
PCNX4-206ENST00000553513 PTTG1IPP53801 180 aa4.73□□□□□ -1.65
PCNX4-206ENST00000553513 ZNF280AP59817 542 aaPredicted RBP4.73□□□□□ -1.65
PCNX4-206ENST00000553513 RAPGEF1Q13905 1077 aa4.73□□□□□ -1.65
PCNX4-206ENST00000553513 PDCD2Q16342 344 aaPredicted RBP4.73□□□□□ -1.65
PCNX4-206ENST00000553513 AFMIDQ63HM1 303 aa4.73□□□□□ -1.65
PCNX4-206ENST00000553513 GADL1Q6ZQY3 521 aa4.73□□□□□ -1.65
PCNX4-206ENST00000553513 PRR18Q8N4B5 295 aa4.73□□□□□ -1.65
PCNX4-206ENST00000553513 ANKRD42Q8N9B4 389 aa4.73□□□□□ -1.65
PCNX4-206ENST00000553513 FBXO18Q8NFZ0 1043 aa4.73□□□□□ -1.65
PCNX4-206ENST00000553513 SLC35B2Q8TB61 432 aa4.73□□□□□ -1.65
PCNX4-206ENST00000553513 KLHDC4Q8TBB5 520 aa4.73□□□□□ -1.65
PCNX4-206ENST00000553513 KAT5Q92993 513 aa4.73□□□□□ -1.65
PCNX4-206ENST00000553513 CYFIP2Q96F07 1278 aa4.73□□□□□ -1.65
PCNX4-206ENST00000553513 SCLT1Q96NL6 688 aa4.73□□□□□ -1.65
PCNX4-206ENST00000553513 TBCBQ99426 244 aa4.73□□□□□ -1.65
PCNX4-206ENST00000553513 MLST8Q9BVC4 326 aa4.73□□□□□ -1.65
PCNX4-206ENST00000553513 APOL5Q9BWW9 433 aa4.73□□□□□ -1.65
PCNX4-206ENST00000553513 LRRC27Q9C0I9 530 aa4.73□□□□□ -1.65
PCNX4-206ENST00000553513 TDP1Q9NUW8 608 aa4.73□□□□□ -1.65
PCNX4-206ENST00000553513 TMEM140Q9NV12 185 aa4.73□□□□□ -1.65
PCNX4-206ENST00000553513 FEZ2Q9UHY8 353 aaPredicted RBP4.73□□□□□ -1.65
PCNX4-206ENST00000553513 LIMCH1Q9UPQ0 1083 aa4.73□□□□□ -1.65
PCNX4-206ENST00000553513 NR2E3Q9Y5X4 410 aa4.73□□□□□ -1.65
PCNX4-206ENST00000553513 HS3ST4Q9Y661 456 aa4.73□□□□□ -1.65
PCNX4-206ENST00000553513 ATRNL1Q5VV63 1379 aa4.73□□□□□ -1.65
PCNX4-206ENST00000553513 A0A1W2PPL8 197 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 DRGXA6NNA5 263 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 H3BUI4 141 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 ALDH2P05091 517 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 HLA-DOAP06340 250 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 RAP2AP10114 183 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 ATP5JP18859 108 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 ZFP36P26651 326 aaKnown RBP4.72□□□□□ -1.65
PCNX4-206ENST00000553513 SMARCA1P28370 1054 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 GUCY1A2P33402 732 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 CHN2P52757 468 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 RAP2BP61225 183 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 FAM189BP81408 668 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 MXRA7P84157 204 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 SEMA5AQ13591 1074 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 IL10RAQ13651 578 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 FGL2Q14314 439 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 POLD3Q15054 466 aaPredicted RBP4.72□□□□□ -1.65
PCNX4-206ENST00000553513 C3orf36Q3SXR2 165 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 FAM102AQ5T9C2 384 aaPredicted RBP4.72□□□□□ -1.65
PCNX4-206ENST00000553513 LAIR1Q6GTX8 287 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 MAEAQ7L5Y9 396 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 C3orf20Q8ND61 904 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.72□□□□□ -1.65
PCNX4-206ENST00000553513 CASKIN2Q8WXE0 1202 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 DPF2Q92785 391 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 SLC39A13Q96H72 371 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 TTPALQ9BTX7 342 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 MRI1Q9BV20 369 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 REXO4Q9GZR2 422 aaKnown RBP4.72□□□□□ -1.65
PCNX4-206ENST00000553513 ARMT1Q9H993 441 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 LMBRD1Q9NUN5 540 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 AJAP1Q9UKB5 411 aaPredicted RBP4.72□□□□□ -1.65
PCNX4-206ENST00000553513 OGDHLQ9ULD0 1010 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 TPCN1Q9ULQ1 816 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 USP15Q9Y4E8 981 aaPredicted RBP4.72□□□□□ -1.65
PCNX4-206ENST00000553513 PCDHA13Q9Y5I0 950 aa4.72□□□□□ -1.65
PCNX4-206ENST00000553513 CCDC189A1A4V9 331 aa4.71□□□□□ -1.66
PCNX4-206ENST00000553513 TMEM200CA6NKL6 621 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms