RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 COL4A3BPQ9Y5P4 624 aa8.13□□□□□ -1.11
ATXN3-219ENST00000553488 TICRRQ7Z2Z1 1910 aa8.13□□□□□ -1.11
ATXN3-219ENST00000553488 GREB1Q4ZG55 1949 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 ARL5CA6NH57 179 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 LILRB5O75023 590 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 ALBP02768 609 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 SPATA31D3P0C874 917 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 TGM1P22735 817 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 BRD2P25440 801 aaKnown RBP8.12□□□□□ -1.11
ATXN3-219ENST00000553488 MLH1P40692 756 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 DNM2P50570 870 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 SCNN1GP51170 649 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 USP11P51784 963 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 ELMSAN1Q6PJG2 1045 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 PARM1Q6UWI2 310 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 SPATA31D4Q6ZUB0 917 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 SRGAP1Q7Z6B7 1085 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 GPR65Q8IYL9 337 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 ZBTB44Q8NCP5 570 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 GSTCDQ8NEC7 633 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 CCDC148Q8NFR7 591 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 BICD2Q8TD16 824 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 PHKBQ93100 1093 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 FAM193BQ96PV7 902 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-219ENST00000553488 EIF2AQ9BY44 585 aaKnown RBP8.12□□□□□ -1.11
ATXN3-219ENST00000553488 GPR62Q9BZJ7 368 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 EPC1Q9H2F5 836 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 DHX33Q9H6R0 707 aaKnown RBP8.12□□□□□ -1.11
ATXN3-219ENST00000553488 MIOSQ9NXC5 875 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 VPS54Q9P1Q0 977 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 FNIP2Q9P278 1114 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 WRAP73Q9P2S5 460 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-219ENST00000553488 FBXW11Q9UKB1 542 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 FBXO4Q9UKT5 387 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 MTF2Q9Y483 593 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-219ENST00000553488 IPPQ9Y573 584 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-219ENST00000553488 ZFYVE26Q68DK2 2539 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 ATRXP46100 2492 aa8.12□□□□□ -1.11
ATXN3-219ENST00000553488 ZMYM2Q9UBW7 1377 aa8.11□□□□□ -1.11
ATXN3-219ENST00000553488 CYP3A7-CYP3A51PA0A087WV96 503 aa8.11□□□□□ -1.11
ATXN3-219ENST00000553488 KANSL1LA0AUZ9 987 aa8.11□□□□□ -1.11
ATXN3-219ENST00000553488 SHISA7A6NL88 538 aa8.11□□□□□ -1.11
ATXN3-219ENST00000553488 PIK3R2O00459 728 aa8.11□□□□□ -1.11
ATXN3-219ENST00000553488 TSPAN1O60635 241 aa8.11□□□□□ -1.11
ATXN3-219ENST00000553488 CPA1P15085 419 aa8.11□□□□□ -1.11
ATXN3-219ENST00000553488 RPL17P18621 184 aaKnown RBP8.11□□□□□ -1.11
ATXN3-219ENST00000553488 NFKB1P19838 968 aa8.11□□□□□ -1.11
ATXN3-219ENST00000553488 CYP3A7P24462 503 aa8.11□□□□□ -1.11
ATXN3-219ENST00000553488 OR1G1P47890 313 aa8.11□□□□□ -1.11
ATXN3-219ENST00000553488 ATXN1P54253 815 aaKnown RBP8.11□□□□□ -1.11
ATXN3-219ENST00000553488 NPEPPSP55786 919 aa8.11□□□□□ -1.11
ATXN3-219ENST00000553488 PSMC5P62195 406 aa8.11□□□□□ -1.11
ATXN3-219ENST00000553488 GPC5P78333 572 aa8.11□□□□□ -1.11
ATXN3-219ENST00000553488 LAMTOR4Q0VGL1 99 aa8.11□□□□□ -1.11
ATXN3-219ENST00000553488 NAA30Q147X3 362 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-219ENST00000553488 NPY5RQ15761 445 aa8.11□□□□□ -1.11
ATXN3-219ENST00000553488 MLF2Q15773 248 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-219ENST00000553488 PLA2G4EQ3MJ16 856 aa8.11□□□□□ -1.11
ATXN3-219ENST00000553488 FUT10Q6P4F1 479 aa8.11□□□□□ -1.11
ATXN3-219ENST00000553488 PALB2Q86YC2 1186 aa8.11□□□□□ -1.11
ATXN3-219ENST00000553488 TBCKQ8TEA7 893 aa8.11□□□□□ -1.11
ATXN3-219ENST00000553488 PRPF31Q8WWY3 499 aaKnown RBP8.11□□□□□ -1.11
ATXN3-219ENST00000553488 GAD1Q99259 594 aa8.11□□□□□ -1.11
ATXN3-219ENST00000553488 JPH2Q9BR39 696 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-219ENST00000553488 RNF26Q9BY78 433 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-219ENST00000553488 OSBPL6Q9BZF3 934 aa8.11□□□□□ -1.11
ATXN3-219ENST00000553488 LTB4R2Q9NPC1 389 aa8.11□□□□□ -1.11
ATXN3-219ENST00000553488 UBN1Q9NPG3 1134 aa8.11□□□□□ -1.11
ATXN3-219ENST00000553488 PRMT8Q9NR22 394 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-219ENST00000553488 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.11□□□□□ -1.11
ATXN3-219ENST00000553488 VAV3Q9UKW4 847 aa8.11□□□□□ -1.11
ATXN3-219ENST00000553488 SMG5Q9UPR3 1016 aaKnown RBP8.11□□□□□ -1.11
ATXN3-219ENST00000553488 HES2Q9Y543 173 aa8.11□□□□□ -1.11
ATXN3-219ENST00000553488 PCDHGA2Q9Y5H1 932 aa8.11□□□□□ -1.11
ATXN3-219ENST00000553488 ZFP37Q9Y6Q3 630 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-219ENST00000553488 SDK1Q7Z5N4 2213 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 CCDC196A0A1B0GTZ2 297 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 SLC37A4O43826 429 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 GAS2O43903 313 aaKnown RBP8.1□□□□□ -1.11
ATXN3-219ENST00000553488 TDGF1P13385 188 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 ITGA4P13612 1032 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 IFNAR1P17181 557 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 TARSP26639 723 aaKnown RBP8.1□□□□□ -1.11
ATXN3-219ENST00000553488 MAGEA9P43362 315 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 NTHL1P78549 312 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 PRKCQQ04759 706 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 PPP2R5CQ13362 524 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 SNW1Q13573 536 aaKnown RBP8.1□□□□□ -1.11
ATXN3-219ENST00000553488 EMC2Q15006 297 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 USP41Q3LFD5 358 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 RTP2Q5QGT7 225 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 MOXD1Q6UVY6 613 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 FERMT3Q86UX7 667 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 GLYCTKQ8IVS8 523 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 CNNM3Q8NE01 707 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 PSPC1Q8WXF1 523 aaKnown RBP8.1□□□□□ -1.11
ATXN3-219ENST00000553488 SLC7A3Q8WY07 619 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 BRF1Q92994 677 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 TMEM143Q96AN5 459 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms