RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 RNF25Q96BH1 459 aaPredicted RBP13.74□□□□□ -0.21
SHMT2-205ENST00000553474 DDX27Q96GQ7 796 aaKnown RBP13.74□□□□□ -0.21
SHMT2-205ENST00000553474 BTBD6Q96KE9 485 aa13.74□□□□□ -0.21
SHMT2-205ENST00000553474 ZNF518BQ9C0D4 1074 aa13.74□□□□□ -0.21
SHMT2-205ENST00000553474 PARVAQ9NVD7 372 aa13.74□□□□□ -0.21
SHMT2-205ENST00000553474 CNTNAP2Q9UHC6 1331 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 CLDN3O15551 220 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 CAND2O75155 1236 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 MAFO75444 373 aaPredicted RBP13.73□□□□□ -0.21
SHMT2-205ENST00000553474 FARP2O94887 1054 aaPredicted RBP13.73□□□□□ -0.21
SHMT2-205ENST00000553474 VNN1O95497 513 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 NOP14P78316 857 aaKnown RBP13.73□□□□□ -0.21
SHMT2-205ENST00000553474 SP2Q02086 613 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 SP4Q02446 784 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 TAP1Q03518 808 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 KRT17Q04695 432 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 MXD4Q14582 209 aaPredicted RBP13.73□□□□□ -0.21
SHMT2-205ENST00000553474 PLCB4Q15147 1175 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 CCNG2Q16589 344 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 ERMARDQ5T6L9 678 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 SPRYD7Q5W111 196 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 BRSK2Q8IWQ3 736 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 CCDC89Q8N998 374 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 ASAP3Q8TDY4 903 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 TCP11Q8WWU5 503 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 CYFIP2Q96F07 1278 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 FAXDC2Q96IV6 333 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.73□□□□□ -0.213e-6■■■■■ 44
SHMT2-205ENST00000553474 ADAM22Q9P0K1 906 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 CHORDC1Q9UHD1 332 aaPredicted RBP13.73□□□□□ -0.21
SHMT2-205ENST00000553474 TCRBV7S2A1N4TA0A589 114 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 FSBPO95073 299 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 CALB1P05937 261 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 SLC10A3P09131 477 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 ACOT2P49753 483 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 KLF1Q13351 362 aaPredicted RBP13.73□□□□□ -0.21
SHMT2-205ENST00000553474 SNAPC2Q13487 334 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 TTC31Q49AM3 519 aaPredicted RBP13.73□□□□□ -0.21
SHMT2-205ENST00000553474 LRRC38Q5VT99 294 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 IER5Q5VY09 327 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 RHBDF2Q6PJF5 856 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 C6orf89Q6UWU4 347 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 RELL1Q8IUW5 271 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 TMEM143Q96AN5 459 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 SERPINB12Q96P63 405 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 JPH2Q9BR39 696 aaPredicted RBP13.73□□□□□ -0.21
SHMT2-205ENST00000553474 TRAIPQ9BWF2 469 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 MRPL4Q9BYD3 311 aaKnown RBP13.73□□□□□ -0.21
SHMT2-205ENST00000553474 SEMA4AQ9H3S1 761 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 CCDC134Q9H6E4 229 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 PPANQ9NQ55 473 aaKnown RBP13.73□□□□□ -0.21
SHMT2-205ENST00000553474 IP6K2Q9UHH9 426 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 PCDHB4Q9Y5E5 795 aa13.73□□□□□ -0.21
SHMT2-205ENST00000553474 UMODL1Q5DID0 1318 aa13.72□□□□□ -0.21
SHMT2-205ENST00000553474 CCL15-CCL14A0A0B4J2E2 113 aa13.72□□□□□ -0.21
SHMT2-205ENST00000553474 RASGRF2O14827 1237 aa13.72□□□□□ -0.21
SHMT2-205ENST00000553474 SORBS3O60504 671 aa13.72□□□□□ -0.21
SHMT2-205ENST00000553474 TOM1L1O75674 476 aa13.72□□□□□ -0.21
SHMT2-205ENST00000553474 TCEA3O75764 348 aa13.72□□□□□ -0.21
SHMT2-205ENST00000553474 CHRM1P11229 460 aaPredicted RBP13.72□□□□□ -0.21
SHMT2-205ENST00000553474 UBA1P22314 1058 aaKnown RBP13.72□□□□□ -0.21
SHMT2-205ENST00000553474 STAT5BP51692 787 aa13.72□□□□□ -0.21
SHMT2-205ENST00000553474 ZNF132P52740 706 aa13.72□□□□□ -0.21
SHMT2-205ENST00000553474 SEC24CP53992 1094 aa13.72□□□□□ -0.21
SHMT2-205ENST00000553474 C1QTNF8P60827 252 aa13.72□□□□□ -0.21
SHMT2-205ENST00000553474 COPS2P61201 443 aa13.72□□□□□ -0.21
SHMT2-205ENST00000553474 MCL1Q07820 350 aa13.72□□□□□ -0.21
SHMT2-205ENST00000553474 MAMLD1Q13495 774 aa13.72□□□□□ -0.21
SHMT2-205ENST00000553474 NCOA4Q13772 614 aa13.72□□□□□ -0.21
SHMT2-205ENST00000553474 CCL15Q16663 113 aa13.72□□□□□ -0.21
SHMT2-205ENST00000553474 DEFB115Q30KQ5 88 aa13.72□□□□□ -0.21
SHMT2-205ENST00000553474 GKAP1Q5VSY0 366 aaPredicted RBP13.72□□□□□ -0.21
SHMT2-205ENST00000553474 CDCA2Q69YH5 1023 aaPredicted RBP13.72□□□□□ -0.21
SHMT2-205ENST00000553474 TMEM270Q6UE05 265 aa13.72□□□□□ -0.21
SHMT2-205ENST00000553474 METTL7BQ6UX53 244 aa13.72□□□□□ -0.21
SHMT2-205ENST00000553474 TAX1BP1Q86VP1 789 aa13.72□□□□□ -0.21
SHMT2-205ENST00000553474 RBBP8NLQ8NC74 664 aaPredicted RBP13.72□□□□□ -0.21
SHMT2-205ENST00000553474 CPA5Q8WXQ8 436 aa13.72□□□□□ -0.21
SHMT2-205ENST00000553474 SEPT1Q8WYJ6 367 aa13.72□□□□□ -0.21
SHMT2-205ENST00000553474 RBM41Q96IZ5 413 aaKnown RBP13.72□□□□□ -0.21
SHMT2-205ENST00000553474 DCLK3Q9C098 648 aa13.72□□□□□ -0.21
SHMT2-205ENST00000553474 C2orf40Q9H1Z8 148 aa13.72□□□□□ -0.21
SHMT2-205ENST00000553474 KCNH4Q9UQ05 1017 aa13.72□□□□□ -0.21
SHMT2-205ENST00000553474 PTPN22Q9Y2R2 807 aa13.72□□□□□ -0.21
SHMT2-205ENST00000553474 LRRC37A2A6NM11 1700 aa13.71□□□□□ -0.21
SHMT2-205ENST00000553474 A0A0G2JLL6 359 aaPredicted RBP13.71□□□□□ -0.21
SHMT2-205ENST00000553474 GSTTP1A0A1W2PQM5 241 aa13.71□□□□□ -0.21
SHMT2-205ENST00000553474 ASS1P00966 412 aaKnown RBP13.71□□□□□ -0.21
SHMT2-205ENST00000553474 MMP8P22894 467 aa13.71□□□□□ -0.21
SHMT2-205ENST00000553474 GTF2A2P52657 109 aa13.71□□□□□ -0.21
SHMT2-205ENST00000553474 CAPSQ13938 189 aa13.71□□□□□ -0.21
SHMT2-205ENST00000553474 SKIDA1Q1XH10 827 aa13.71□□□□□ -0.21
SHMT2-205ENST00000553474 DRICH1Q6PGQ1 229 aaPredicted RBP13.71□□□□□ -0.21
SHMT2-205ENST00000553474 PRRT2Q7Z6L0 340 aaPredicted RBP13.71□□□□□ -0.21
SHMT2-205ENST00000553474 UBR7Q8N806 425 aa13.71□□□□□ -0.21
SHMT2-205ENST00000553474 RAPGEF5Q92565 580 aa13.71□□□□□ -0.21
SHMT2-205ENST00000553474 CHMP6Q96FZ7 201 aa13.71□□□□□ -0.21
SHMT2-205ENST00000553474 CAPNS2Q96L46 248 aa13.71□□□□□ -0.21
SHMT2-205ENST00000553474 XPO6Q96QU8 1125 aaKnown RBP13.71□□□□□ -0.21
SHMT2-205ENST00000553474 TARS2Q9BW92 718 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms