RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 NCOA4Q13772 614 aa15.99■□□□□ 0.15
MTHFD1-204ENST00000553405 KRT31Q15323 416 aa15.99■□□□□ 0.15
MTHFD1-204ENST00000553405 DCAF17Q5H9S7 520 aaPredicted RBP15.99■□□□□ 0.15
MTHFD1-204ENST00000553405 RTP2Q5QGT7 225 aa15.99■□□□□ 0.15
MTHFD1-204ENST00000553405 KIAA0319Q5VV43 1072 aa15.99■□□□□ 0.15
MTHFD1-204ENST00000553405 DPY19L2P1Q6NXN4 242 aa15.99■□□□□ 0.15
MTHFD1-204ENST00000553405 Q7L0L9 218 aa15.99■□□□□ 0.15
MTHFD1-204ENST00000553405 POF1BQ8WVV4 589 aa15.99■□□□□ 0.15
MTHFD1-204ENST00000553405 ELMO3Q96BJ8 720 aa15.99■□□□□ 0.15
MTHFD1-204ENST00000553405 B3GALT6Q96L58 329 aa15.99■□□□□ 0.15
MTHFD1-204ENST00000553405 TSPY26PQ9H489 355 aa15.99■□□□□ 0.15
MTHFD1-204ENST00000553405 GDAP2Q9NXN4 497 aa15.99■□□□□ 0.15
MTHFD1-204ENST00000553405 LIMA1Q9UHB6 759 aaKnown RBP15.99■□□□□ 0.15
MTHFD1-204ENST00000553405 SF3B1O75533 1304 aaKnown RBP eCLIP15.98■□□□□ 0.15
MTHFD1-204ENST00000553405 TBC1D4O60343 1298 aa15.98■□□□□ 0.15
MTHFD1-204ENST00000553405 TADA2AO75478 443 aa15.98■□□□□ 0.15
MTHFD1-204ENST00000553405 PAX3P23760 479 aa15.98■□□□□ 0.15
MTHFD1-204ENST00000553405 IRS1P35568 1242 aa15.98■□□□□ 0.15
MTHFD1-204ENST00000553405 TAF6P49848 677 aa15.98■□□□□ 0.15
MTHFD1-204ENST00000553405 DSG1Q02413 1049 aa15.98■□□□□ 0.15
MTHFD1-204ENST00000553405 MRPL58Q14197 206 aaKnown RBP15.98■□□□□ 0.15
MTHFD1-204ENST00000553405 MAN2A1Q16706 1144 aa15.98■□□□□ 0.15
MTHFD1-204ENST00000553405 TPD52L1Q16890 204 aaPredicted RBP15.98■□□□□ 0.15
MTHFD1-204ENST00000553405 ZNF697Q5TEC3 545 aa15.98■□□□□ 0.15
MTHFD1-204ENST00000553405 TCERG1LQ5VWI1 586 aa15.98■□□□□ 0.15
MTHFD1-204ENST00000553405 GAS2L3Q86XJ1 694 aa15.98■□□□□ 0.15
MTHFD1-204ENST00000553405 FAM114A1Q8IWE2 563 aa15.98■□□□□ 0.15
MTHFD1-204ENST00000553405 HPDLQ96IR7 371 aa15.98■□□□□ 0.15
MTHFD1-204ENST00000553405 GUCD1Q96NT3 240 aa15.98■□□□□ 0.15
MTHFD1-204ENST00000553405 TUBGCP2Q9BSJ2 902 aa15.98■□□□□ 0.15
MTHFD1-204ENST00000553405 PRDM12Q9H4Q4 367 aa15.98■□□□□ 0.15
MTHFD1-204ENST00000553405 APOBEC3GQ9HC16 384 aaKnown RBP15.98■□□□□ 0.15
MTHFD1-204ENST00000553405 PCDHGC5Q9Y5F6 944 aa15.98■□□□□ 0.15
MTHFD1-204ENST00000553405 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.98■□□□□ 0.15
MTHFD1-204ENST00000553405 IRAK3Q9Y616 596 aa15.98■□□□□ 0.15
MTHFD1-204ENST00000553405 PRRC2BQ5JSZ5 2229 aaKnown RBP15.98■□□□□ 0.15
MTHFD1-204ENST00000553405 KPNA7A9QM74 516 aa15.97■□□□□ 0.15
MTHFD1-204ENST00000553405 P4HA2O15460 535 aa15.97■□□□□ 0.15
MTHFD1-204ENST00000553405 STX10O60499 249 aa15.97■□□□□ 0.15
MTHFD1-204ENST00000553405 AFPP02771 609 aaKnown RBP15.97■□□□□ 0.15
MTHFD1-204ENST00000553405 CYP11A1P05108 521 aa15.97■□□□□ 0.15
MTHFD1-204ENST00000553405 KRT19P08727 400 aa15.97■□□□□ 0.15
MTHFD1-204ENST00000553405 CTSAP10619 480 aa15.97■□□□□ 0.15
MTHFD1-204ENST00000553405 TKTP29401 623 aaKnown RBP15.97■□□□□ 0.15
MTHFD1-204ENST00000553405 ATICP31939 592 aa15.97■□□□□ 0.15
MTHFD1-204ENST00000553405 PNPLA4P41247 253 aa15.97■□□□□ 0.15
MTHFD1-204ENST00000553405 ELAVL2Q12926 359 aaKnown RBP15.97■□□□□ 0.15
MTHFD1-204ENST00000553405 BIRC3Q13489 604 aa15.97■□□□□ 0.15
MTHFD1-204ENST00000553405 PTPN14Q15678 1187 aa15.97■□□□□ 0.15
MTHFD1-204ENST00000553405 FAM171A1Q5VUB5 890 aa15.97■□□□□ 0.15
MTHFD1-204ENST00000553405 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.97■□□□□ 0.15
MTHFD1-204ENST00000553405 GPR65Q8IYL9 337 aa15.97■□□□□ 0.15
MTHFD1-204ENST00000553405 VPS52Q8N1B4 723 aa15.97■□□□□ 0.15
MTHFD1-204ENST00000553405 FBXL13Q8NEE6 735 aa15.97■□□□□ 0.15
MTHFD1-204ENST00000553405 SENP8Q96LD8 212 aa15.97■□□□□ 0.15
MTHFD1-204ENST00000553405 ZNF560Q96MR9 790 aa15.97■□□□□ 0.15
MTHFD1-204ENST00000553405 RTP3Q9BQQ7 232 aa15.97■□□□□ 0.15
MTHFD1-204ENST00000553405 LMAN2LQ9H0V9 348 aa15.97■□□□□ 0.15
MTHFD1-204ENST00000553405 MMRN2Q9H8L6 949 aa15.97■□□□□ 0.15
MTHFD1-204ENST00000553405 PCDHB8Q9UN66 801 aa15.97■□□□□ 0.15
MTHFD1-204ENST00000553405 NME7Q9Y5B8 376 aa15.97■□□□□ 0.15
MTHFD1-204ENST00000553405 SMTNL1A8MU46 457 aa15.96■□□□□ 0.15
MTHFD1-204ENST00000553405 SYN3O14994 580 aa15.96■□□□□ 0.15
MTHFD1-204ENST00000553405 TYMPP19971 482 aa15.96■□□□□ 0.15
MTHFD1-204ENST00000553405 MTIF2P46199 727 aaKnown RBP15.96■□□□□ 0.15
MTHFD1-204ENST00000553405 MYL7Q01449 175 aa15.96■□□□□ 0.15
MTHFD1-204ENST00000553405 KRT17Q04695 432 aa15.96■□□□□ 0.15
MTHFD1-204ENST00000553405 USP41Q3LFD5 358 aa15.96■□□□□ 0.15
MTHFD1-204ENST00000553405 SV2CQ496J9 727 aa15.96■□□□□ 0.15
MTHFD1-204ENST00000553405 VWA3BQ502W6 1294 aa15.96■□□□□ 0.15
MTHFD1-204ENST00000553405 SPOPLQ6IQ16 392 aa15.96■□□□□ 0.15
MTHFD1-204ENST00000553405 LNX1Q8TBB1 728 aaPredicted RBP15.96■□□□□ 0.15
MTHFD1-204ENST00000553405 AUTS2Q8WXX7 1259 aa15.96■□□□□ 0.15
MTHFD1-204ENST00000553405 PIK3R5Q8WYR1 880 aa15.96■□□□□ 0.15
MTHFD1-204ENST00000553405 MRPL38Q96DV4 380 aaKnown RBP15.96■□□□□ 0.15
MTHFD1-204ENST00000553405 PI4K2AQ9BTU6 479 aa15.96■□□□□ 0.15
MTHFD1-204ENST00000553405 RXFP1Q9HBX9 757 aa15.96■□□□□ 0.15
MTHFD1-204ENST00000553405 TLR9Q9NR96 1032 aa15.96■□□□□ 0.15
MTHFD1-204ENST00000553405 RAB20Q9NX57 234 aa15.96■□□□□ 0.15
MTHFD1-204ENST00000553405 TAB2Q9NYJ8 693 aa15.96■□□□□ 0.15
MTHFD1-204ENST00000553405 L1RE1Q9UN81 338 aa15.96■□□□□ 0.15
MTHFD1-204ENST00000553405 NUB1Q9Y5A7 615 aa15.96■□□□□ 0.15
MTHFD1-204ENST00000553405 GTPBP10A4D1E9 387 aaKnown RBP15.95■□□□□ 0.14
MTHFD1-204ENST00000553405 HIDE1A8MVS5 230 aa15.95■□□□□ 0.14
MTHFD1-204ENST00000553405 OAZ2O95190 189 aa15.95■□□□□ 0.14
MTHFD1-204ENST00000553405 PIK3CAP42336 1068 aa15.95■□□□□ 0.14
MTHFD1-204ENST00000553405 ASPAP45381 313 aa15.95■□□□□ 0.14
MTHFD1-204ENST00000553405 COPB1P53618 953 aaKnown RBP15.95■□□□□ 0.14
MTHFD1-204ENST00000553405 SOWAHAQ2M3V2 549 aa15.95■□□□□ 0.14
MTHFD1-204ENST00000553405 SGSM1Q2NKQ1 1148 aa15.95■□□□□ 0.14
MTHFD1-204ENST00000553405 RSPO2Q6UXX9 243 aaPredicted RBP15.95■□□□□ 0.14
MTHFD1-204ENST00000553405 PDCL2Q8N4E4 241 aa15.95■□□□□ 0.14
MTHFD1-204ENST00000553405 KBTBD7Q8WVZ9 684 aa15.95■□□□□ 0.14
MTHFD1-204ENST00000553405 TAF4BQ92750 862 aa15.95■□□□□ 0.14
MTHFD1-204ENST00000553405 FAM161BQ96MY7 647 aa15.95■□□□□ 0.14
MTHFD1-204ENST00000553405 TTPALQ9BTX7 342 aa15.95■□□□□ 0.14
MTHFD1-204ENST00000553405 SDCBP2Q9H190 292 aa15.95■□□□□ 0.14
MTHFD1-204ENST00000553405 NDST4Q9H3R1 872 aa15.95■□□□□ 0.14
MTHFD1-204ENST00000553405 MTMR10Q9NXD2 777 aa15.95■□□□□ 0.14
MTHFD1-204ENST00000553405 LMCD1Q9NZU5 365 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms