RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 RNF10Q8N5U6 811 aaKnown RBP12.08□□□□□ -0.47
CACNB3-224ENST00000552812 LNX1Q8TBB1 728 aaPredicted RBP12.08□□□□□ -0.47
CACNB3-224ENST00000552812 WDR24Q96S15 920 aa12.08□□□□□ -0.47
CACNB3-224ENST00000552812 TRAIPQ9BWF2 469 aa12.08□□□□□ -0.47
CACNB3-224ENST00000552812 FAM124BQ9H5Z6 455 aaPredicted RBP12.08□□□□□ -0.47
CACNB3-224ENST00000552812 TRIM10Q9UDY6 481 aa12.08□□□□□ -0.47
CACNB3-224ENST00000552812 R3HCC1Q9Y3T6 440 aaKnown RBP12.08□□□□□ -0.47
CACNB3-224ENST00000552812 IPPQ9Y573 584 aa12.08□□□□□ -0.47
CACNB3-224ENST00000552812 XPOTO43592 962 aaKnown RBP12.08□□□□□ -0.48
CACNB3-224ENST00000552812 CLSTN1O94985 981 aa12.08□□□□□ -0.48
CACNB3-224ENST00000552812 SGPL1O95470 568 aa12.08□□□□□ -0.48
CACNB3-224ENST00000552812 ITGB3P05106 788 aa12.08□□□□□ -0.48
CACNB3-224ENST00000552812 KRT19P08727 400 aa12.08□□□□□ -0.48
CACNB3-224ENST00000552812 KCNE1P15382 129 aa12.08□□□□□ -0.48
CACNB3-224ENST00000552812 RBP5P82980 135 aa12.08□□□□□ -0.48
CACNB3-224ENST00000552812 CDR2Q01850 454 aa12.08□□□□□ -0.48
CACNB3-224ENST00000552812 ZNF667Q5HYK9 610 aa12.08□□□□□ -0.48
CACNB3-224ENST00000552812 NOP9Q86U38 636 aaKnown RBP12.08□□□□□ -0.48
CACNB3-224ENST00000552812 SLC47A2Q86VL8 602 aa12.08□□□□□ -0.48
CACNB3-224ENST00000552812 HACE1Q8IYU2 909 aa12.08□□□□□ -0.48
CACNB3-224ENST00000552812 UBR7Q8N806 425 aa12.08□□□□□ -0.48
CACNB3-224ENST00000552812 TRIM58Q8NG06 486 aa12.08□□□□□ -0.48
CACNB3-224ENST00000552812 SECISBP2LQ93073 1101 aaKnown RBP12.08□□□□□ -0.48
CACNB3-224ENST00000552812 ELMO3Q96BJ8 720 aa12.08□□□□□ -0.48
CACNB3-224ENST00000552812 ERVK-5Q9HDB9 667 aa12.08□□□□□ -0.48
CACNB3-224ENST00000552812 DPP3Q9NY33 737 aa12.08□□□□□ -0.48
CACNB3-224ENST00000552812 TFR2Q9UP52 801 aa12.08□□□□□ -0.48
CACNB3-224ENST00000552812 HES2Q9Y543 173 aa12.08□□□□□ -0.48
CACNB3-224ENST00000552812 UMODL1Q5DID0 1318 aa12.08□□□□□ -0.48
CACNB3-224ENST00000552812 PDCD11Q14690 1871 aaKnown RBP12.07□□□□□ -0.48
CACNB3-224ENST00000552812 FANCGO15287 622 aa12.07□□□□□ -0.48
CACNB3-224ENST00000552812 H2AFZP0C0S5 128 aa12.07□□□□□ -0.48
CACNB3-224ENST00000552812 GZMAP12544 262 aa12.07□□□□□ -0.48
CACNB3-224ENST00000552812 P4HA1P13674 534 aa12.07□□□□□ -0.48
CACNB3-224ENST00000552812 ZSCAN20P17040 1043 aaPredicted RBP12.07□□□□□ -0.48
CACNB3-224ENST00000552812 ASPAP45381 313 aa12.07□□□□□ -0.48
CACNB3-224ENST00000552812 NFX1Q12986 1120 aaKnown RBP12.07□□□□□ -0.48
CACNB3-224ENST00000552812 H2AFVQ71UI9 128 aa12.07□□□□□ -0.48
CACNB3-224ENST00000552812 RPUSD2Q8IZ73 545 aaKnown RBP12.07□□□□□ -0.48
CACNB3-224ENST00000552812 SMG8Q8ND04 991 aaKnown RBP12.07□□□□□ -0.48
CACNB3-224ENST00000552812 BEST2Q8NFU1 509 aa12.07□□□□□ -0.48
CACNB3-224ENST00000552812 U2AF1L4Q8WU68 220 aaKnown RBP12.07□□□□□ -0.48
CACNB3-224ENST00000552812 SLC20A1Q8WUM9 679 aa12.07□□□□□ -0.48
CACNB3-224ENST00000552812 DDX1Q92499 740 aaKnown RBP12.07□□□□□ -0.48
CACNB3-224ENST00000552812 BCO2Q9BYV7 579 aa12.07□□□□□ -0.48
CACNB3-224ENST00000552812 FAM105AQ9NUU6 356 aa12.07□□□□□ -0.48
CACNB3-224ENST00000552812 OGDHLQ9ULD0 1010 aa12.07□□□□□ -0.48
CACNB3-224ENST00000552812 UBQLN1Q9UMX0 589 aaKnown RBP12.07□□□□□ -0.48
CACNB3-224ENST00000552812 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.07□□□□□ -0.48
CACNB3-224ENST00000552812 DUSP10Q9Y6W6 482 aa12.07□□□□□ -0.48
CACNB3-224ENST00000552812 A0A0A6YYK5 440 aaPredicted RBP12.06□□□□□ -0.48
CACNB3-224ENST00000552812 MACROD2A1Z1Q3 448 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 TACC1O75410 805 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 CD4P01730 458 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 CKBP12277 381 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 POLR2BP30876 1174 aaKnown RBP12.06□□□□□ -0.48
CACNB3-224ENST00000552812 RAB27AP51159 221 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 ZNF132P52740 706 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 TERF1P54274 439 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 PAK2Q13177 524 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 LPIN1Q14693 890 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 ZNF618Q5T7W0 954 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 SCARA3Q6AZY7 606 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 TMEM270Q6UE05 265 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 SLC35F6Q8N357 371 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 CAGE1Q8TC20 777 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 ZMAT2Q96NC0 199 aaKnown RBP12.06□□□□□ -0.48
CACNB3-224ENST00000552812 NOX5Q96PH1 765 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 DEFB118Q96PH6 123 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 ALS2CR12Q96Q35 445 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 ISCUQ9H1K1 167 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 AGO3Q9H9G7 860 aaKnown RBP12.06□□□□□ -0.48
CACNB3-224ENST00000552812 CYP3A43Q9HB55 503 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 PARP2Q9UGN5 583 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 PADI3Q9ULW8 664 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 VPS9D1Q9Y2B5 631 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 PCDHB4Q9Y5E5 795 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 SMIM28A0A1B0GU29 152 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 ANO9A1A5B4 782 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 CTAGE9A4FU28 777 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 ZNF623O75123 536 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 TMEM253P0C7T8 217 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 GHRP10912 638 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 CCL5P13501 91 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 CHRNB2P17787 502 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 CYP3A5P20815 502 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 AKAP5P24588 427 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 CDK7P50613 346 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 C1QTNF8P60827 252 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 FMO1Q01740 532 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 MYO1EQ12965 1108 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 DSG2Q14126 1118 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 IFI16Q16666 785 aaKnown RBP12.06□□□□□ -0.48
CACNB3-224ENST00000552812 WDR72Q3MJ13 1102 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 FAM43BQ6ZT52 329 aaPredicted RBP12.06□□□□□ -0.48
CACNB3-224ENST00000552812 TTC39CQ8N584 583 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 LRRC52Q8N7C0 313 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 RBBP8NLQ8NC74 664 aaPredicted RBP12.06□□□□□ -0.48
CACNB3-224ENST00000552812 HPDLQ96IR7 371 aa12.06□□□□□ -0.48
CACNB3-224ENST00000552812 KCNK17Q96T54 332 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms