RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 ZSCAN31Q96LW9 406 aaPredicted RBP6.3□□□□□ -1.4
SMARCC2-213ENST00000552627 SPATA33Q96N06 139 aa6.3□□□□□ -1.4
SMARCC2-213ENST00000552627 DIRC2Q96SL1 478 aa6.3□□□□□ -1.4
SMARCC2-213ENST00000552627 PHF20Q9BVI0 1012 aa6.3□□□□□ -1.4
SMARCC2-213ENST00000552627 NSUN3Q9H649 340 aaKnown RBP6.3□□□□□ -1.4
SMARCC2-213ENST00000552627 MLXIPQ9HAP2 919 aa6.3□□□□□ -1.4
SMARCC2-213ENST00000552627 GP6Q9HCN6 339 aa6.3□□□□□ -1.4
SMARCC2-213ENST00000552627 SH3GLB2Q9NR46 395 aa6.3□□□□□ -1.4
SMARCC2-213ENST00000552627 STRIP2Q9ULQ0 834 aa6.3□□□□□ -1.4
SMARCC2-213ENST00000552627 ZNF451Q9Y4E5 1061 aa6.3□□□□□ -1.4
SMARCC2-213ENST00000552627 IGLV3-22A0A075B6J6 115 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 NKRFO15226 690 aaKnown RBP eCLIP6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 STAM2O75886 525 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 ZNF205O95201 554 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 TDP2O95551 362 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 FOSP01100 380 aaPredicted RBP6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 ATF4P18848 351 aaPredicted RBP6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 SLC7A5Q01650 507 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 INF2Q27J81 1249 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 CEP55Q53EZ4 464 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 PRR16Q569H4 304 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 FAM47CQ5HY64 1035 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 UTP14CQ5TAP6 766 aaKnown RBP6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 KRT40Q6A162 431 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 XRRA1Q6P2D8 792 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 CEP128Q6ZU80 1094 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 PIK3AP1Q6ZUJ8 805 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 NLRX1Q86UT6 975 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 PLA2G4DQ86XP0 818 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 BICD2Q8TD16 824 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 TBCKQ8TEA7 893 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 WASF1Q92558 559 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 KAT2BQ92831 832 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 GLT1D1Q96MS3 346 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 MXRA8Q9BRK3 442 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 MTG1Q9BT17 334 aaPredicted RBP6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 CDADC1Q9BWV3 514 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 GLT8D2Q9H1C3 349 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 TRPV6Q9H1D0 765 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 SLC6A17Q9H1V8 727 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 CAPN10Q9HC96 672 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 AGO4Q9HCK5 861 aaKnown RBP6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 JADE2Q9NQC1 790 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 KCNH7Q9NS40 1196 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 Q9Y3F1 56 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 FHOD1Q9Y613 1164 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 SCN10AQ9Y5Y9 1956 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 DNAH12Q6ZR08 3092 aa6.29□□□□□ -1.4
SMARCC2-213ENST00000552627 A0A0U1RQG5 324 aaPredicted RBP6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 TRIM43BA6NCK2 446 aa6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 BTBD18B2RXH4 712 aa6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 KIF28PB7ZC32 967 aa6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 ARVCFO00192 962 aa6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 NOP56O00567 594 aaKnown RBP6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 SLC37A4O43826 429 aa6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 ZEB2O60315 1214 aa6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 PSPNO60542 156 aa6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 CCNE2O96020 404 aa6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 MMP1P03956 469 aa6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 LGALS2P05162 132 aa6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 ITGA4P13612 1032 aa6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 CAPN2P17655 700 aa6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 ITGB8P26012 769 aa6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 KRT2P35908 639 aa6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 CDK7P50613 346 aa6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 ITGA7Q13683 1181 aa6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 GNL2Q13823 731 aaKnown RBP6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 TRIM29Q14134 588 aa6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 KCNV1Q6PIU1 500 aa6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 METTL7BQ6UX53 244 aa6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 SMAP1Q8IYB5 467 aaPredicted RBP6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 DIS3L2Q8IYB7 885 aaKnown RBP6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 FIBCD1Q8N539 461 aa6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 FAM184AQ8NB25 1140 aa6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 FBXO15Q8NCQ5 510 aaPredicted RBP6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 PPTC7Q8NI37 304 aa6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 LENG9Q96B70 501 aa6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 TRIM43Q96BQ3 446 aaPredicted RBP6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 ANAPC16Q96DE5 110 aa6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 C8orf76Q96K31 380 aa6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 FCRL2Q96LA5 508 aaPredicted RBP6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 GPR20Q99678 358 aa6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 LLPHQ9BRT6 129 aaKnown RBP6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 PDLIM7Q9NR12 457 aa6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 TRMT13Q9NUP7 481 aaKnown RBP6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 TNFRSF10DQ9UBN6 386 aa6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 PCDHB10Q9UN67 800 aa6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 YBX2Q9Y2T7 364 aaKnown RBP6.28□□□□□ -1.4
SMARCC2-213ENST00000552627 ELP1O95163 1332 aa6.27□□□□□ -1.41
SMARCC2-213ENST00000552627 UMODL1Q5DID0 1318 aa6.27□□□□□ -1.41
SMARCC2-213ENST00000552627 WDR81Q562E7 1941 aa6.27□□□□□ -1.41
SMARCC2-213ENST00000552627 CCDC194A0A1B0GVG4 234 aa6.27□□□□□ -1.41
SMARCC2-213ENST00000552627 GSTTP1A0A1W2PQM5 241 aa6.27□□□□□ -1.41
SMARCC2-213ENST00000552627 NOTOA8MTQ0 251 aa6.27□□□□□ -1.41
SMARCC2-213ENST00000552627 IPO5O00410 1097 aaKnown RBP6.27□□□□□ -1.41
SMARCC2-213ENST00000552627 MSH4O15457 936 aa6.27□□□□□ -1.41
SMARCC2-213ENST00000552627 CHMP2AO43633 222 aa6.27□□□□□ -1.41
SMARCC2-213ENST00000552627 B4GALT4O60513 344 aa6.27□□□□□ -1.41
SMARCC2-213ENST00000552627 CABYRO75952 493 aa6.27□□□□□ -1.41
SMARCC2-213ENST00000552627 F2P00734 622 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms