RNA–Protein interactions for RNA: ENST00000552555.1

DDX23-215, Transcript of DEAD-box helicase 23, human

TSL 4

Gene DDX23, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX23-215	ENST00000552555	CLUL1	Q15846	466 aa		10.99	□□□□□ -0.65
DDX23-215	ENST00000552555	ZNF667	Q5HYK9	610 aa		10.99	□□□□□ -0.65
DDX23-215	ENST00000552555	UBXN11	Q5T124	520 aa		10.99	□□□□□ -0.65
DDX23-215	ENST00000552555	MAP3K21	Q5TCX8	1036 aa		10.99	□□□□□ -0.65
DDX23-215	ENST00000552555	CCDC181	Q5TID7	509 aa		10.99	□□□□□ -0.65
DDX23-215	ENST00000552555	PLEKHA7	Q6IQ23	1121 aa		10.99	□□□□□ -0.65
DDX23-215	ENST00000552555	CC2D1A	Q6P1N0	951 aa	Predicted RBP	10.99	□□□□□ -0.65
DDX23-215	ENST00000552555	CATSPER4	Q7RTX7	472 aa		10.99	□□□□□ -0.65
DDX23-215	ENST00000552555	C7orf31	Q8N865	590 aa		10.99	□□□□□ -0.65
DDX23-215	ENST00000552555	USP38	Q8NB14	1042 aa		10.99	□□□□□ -0.65
DDX23-215	ENST00000552555	DNAJB3	Q8WWF6	145 aa		10.99	□□□□□ -0.65
DDX23-215	ENST00000552555	FAM212A	Q96EL1	285 aa		10.99	□□□□□ -0.65
DDX23-215	ENST00000552555	CYFIP2	Q96F07	1278 aa		10.99	□□□□□ -0.65
DDX23-215	ENST00000552555	SCLT1	Q96NL6	688 aa		10.99	□□□□□ -0.65
DDX23-215	ENST00000552555	OSMR	Q99650	979 aa		10.99	□□□□□ -0.65
DDX23-215	ENST00000552555	ZSWIM1	Q9BR11	485 aa		10.99	□□□□□ -0.65
DDX23-215	ENST00000552555	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	10.99	□□□□□ -0.65	1e-6	■■□□□ 13.4
DDX23-215	ENST00000552555	FAM49A	Q9H0Q0	323 aa	Predicted RBP	10.99	□□□□□ -0.65
DDX23-215	ENST00000552555	LHX5	Q9H2C1	402 aa		10.99	□□□□□ -0.65
DDX23-215	ENST00000552555	SPC25	Q9HBM1	224 aa		10.99	□□□□□ -0.65
DDX23-215	ENST00000552555	CNTN3	Q9P232	1028 aa		10.99	□□□□□ -0.65
DDX23-215	ENST00000552555	CTTNBP2NL	Q9P2B4	639 aa		10.99	□□□□□ -0.65
DDX23-215	ENST00000552555	CNOT8	Q9UFF9	292 aa	Known RBP	10.99	□□□□□ -0.65
DDX23-215	ENST00000552555	PACSIN2	Q9UNF0	486 aa	Predicted RBP	10.99	□□□□□ -0.65
DDX23-215	ENST00000552555	PCNT	O95613	3336 aa		10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	TCRBV5S1A1T	A0A578	114 aa		10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	KCNK3	O14649	394 aa		10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	TBC1D8	O95759	1140 aa		10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	ITGB3	P05106	788 aa		10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	RARB	P10826	455 aa		10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	P4HA1	P13674	534 aa		10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	KCNE1	P15382	129 aa		10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	MMP8	P22894	467 aa		10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	TNFRSF8	P28908	595 aa		10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	NSF	P46459	744 aa	Known RBP	10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	PEX5	P50542	639 aa		10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	GSC	P56915	257 aa	Predicted RBP	10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	ZNF200	P98182	395 aa	Predicted RBP	10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	SP3	Q02447	781 aa		10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	PRKCZ	Q05513	592 aa		10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	CACNB2	Q08289	660 aa	Predicted RBP	10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	BEND6	Q5SZJ8	279 aa	Predicted RBP	10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	TMCO3	Q6UWJ1	677 aa		10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	LRRC52	Q8N7C0	313 aa		10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	ZNF564	Q8TBZ8	553 aa	Predicted RBP	10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	WHAMM	Q8TF30	809 aa		10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	TMEM40	Q8WWA1	233 aa		10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	ZNF653	Q96CK0	615 aa		10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	MS4A14	Q96JA4	679 aa		10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	CAPNS2	Q96L46	248 aa		10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	PPP1R16B	Q96T49	567 aa		10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	NUP85	Q9BW27	656 aa		10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	CELF4	Q9BZC1	486 aa	Known RBP	10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	WNT8A	Q9H1J5	351 aa		10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	GOLPH3	Q9H4A6	298 aa		10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	CREBZF	Q9NS37	354 aa		10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	DPP3	Q9NY33	737 aa		10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	LCMT1	Q9UIC8	334 aa		10.98	□□□□□ -0.65
DDX23-215	ENST00000552555	CCDC188	H7C350	402 aa		10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	PGRMC1	O00264	195 aa	Known RBP	10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	THAP12	O43422	761 aa		10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	CILP	O75339	1184 aa		10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	NPTXR	O95502	500 aa		10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	GNRH1	P01148	92 aa		10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	CFH	P08603	1231 aa		10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	C6orf222	P0C671	652 aa	Predicted RBP	10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	CYP3A5	P20815	502 aa		10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	FGFR4	P22455	802 aa		10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	MAN1A1	P33908	653 aa		10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	CTNNA1	P35221	906 aa	Known RBP	10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	SLC1A1	P43005	524 aa		10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	RAD23B	P54727	409 aa		10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	VSNL1	P62760	191 aa		10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	CAP1	Q01518	475 aa		10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	C2orf54	Q08AI8	447 aa		10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	DEFB115	Q30KQ5	88 aa		10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	GNAS	Q5JWF2	1037 aa		10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	DCAF12L1	Q5VU92	463 aa		10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	NAA35	Q5VZE5	725 aa		10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	CCDC70	Q6NSX1	233 aa		10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	LIMS2	Q7Z4I7	341 aa		10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	SERINC5	Q86VE9	423 aa		10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	EIF1AD	Q8N9N8	165 aa	Known RBP	10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	HPDL	Q96IR7	371 aa		10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	ZMAT2	Q96NC0	199 aa	Known RBP	10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	PSMB7	Q99436	277 aa		10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	EIF2A	Q9BY44	585 aa	Known RBP	10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	SDCBP2	Q9H190	292 aa		10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	MRPL47	Q9HD33	250 aa	Known RBP	10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	ARFGAP3	Q9NP61	516 aa		10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	RBM12	Q9NTZ6	932 aa	Known RBP	10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	SRRD	Q9UH36	339 aa		10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	KIAA1257	Q9ULG3	409 aa		10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	POLI	Q9UNA4	740 aa		10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	PCDHA3	Q9Y5H8	950 aa		10.97	□□□□□ -0.65
DDX23-215	ENST00000552555	DOCK3	Q8IZD9	2030 aa		10.96	□□□□□ -0.65
DDX23-215	ENST00000552555	MGAM	O43451	1857 aa		10.96	□□□□□ -0.65
DDX23-215	ENST00000552555	CCDC66	A2RUB6	948 aa		10.96	□□□□□ -0.65
DDX23-215	ENST00000552555	MAP2K7	O14733	419 aa		10.96	□□□□□ -0.65
DDX23-215	ENST00000552555	MED7	O43513	233 aa		10.96	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms