RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	OTOP2	Q7RTS6	562 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	LRRC71	Q8N4P6	559 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	CEP170P1	Q96L14	293 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	AK8	Q96MA6	479 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	MAP7D2	Q96T17	732 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	JPH2	Q9BR39	696 aa	Predicted RBP	7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	MMTAG2	Q9BU76	263 aa	Known RBP	7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	MTIF3	Q9H2K0	278 aa	Known RBP	7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	ANKEF1	Q9NU02	776 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	TRPV2	Q9Y5S1	764 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	CLIC4	Q9Y696	253 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	CDY2A	Q9Y6F7	541 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	SQOR	Q9Y6N5	450 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422		A0A0C4DFX4	3053 aa		7.39	□□□□□ -1.23
CNOT2-238	ENST00000552422	PRRC2B	Q5JSZ5	2229 aa	Known RBP	7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	RBAK-RBAKDN	I3L0D1	243 aa		7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	EFCAB14	O75071	495 aa		7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	GPR32	O75388	356 aa		7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	GHR	P10912	638 aa		7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	TMOD1	P28289	359 aa		7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	LONP1	P36776	959 aa	Known RBP	7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	CCT6A	P40227	531 aa	Known RBP	7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	NASP	P49321	788 aa	Predicted RBP	7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	DNM2	P50570	870 aa		7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	FXR1	P51114	621 aa	Known RBP eCLIP	7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	POLG	P54098	1239 aa	Predicted RBP	7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	DRP2	Q13474	957 aa		7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	KIZ	Q2M2Z5	673 aa		7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	TCTN1	Q2MV58	587 aa		7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	XKR9	Q5GH70	373 aa		7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	PPM1J	Q5JR12	505 aa		7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	HYI	Q5T013	277 aa		7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	KRT79	Q5XKE5	535 aa		7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	TSHZ1	Q6ZSZ6	1077 aa		7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	EXOC8	Q8IYI6	725 aa		7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	USP38	Q8NB14	1042 aa		7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	PIGO	Q8TEQ8	1089 aa		7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	TMEM40	Q8WWA1	233 aa		7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	APBB2	Q92870	758 aa		7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	FRMD6	Q96NE9	622 aa		7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	USP28	Q96RU2	1077 aa		7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	IFIH1	Q9BYX4	1025 aa	Known RBP	7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	CELF4	Q9BZC1	486 aa	Known RBP	7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	XPNPEP1	Q9NQW7	623 aa		7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	CACNA2D2	Q9NY47	1150 aa		7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	ADGRE2	Q9UHX3	823 aa		7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	DBR1	Q9UK59	544 aa	Known RBP	7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	AKT3	Q9Y243	479 aa		7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	VCAN	P13611	3396 aa		7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	ANK1	P16157	1881 aa		7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	PLXNA4	Q9HCM2	1894 aa		7.38	□□□□□ -1.23
CNOT2-238	ENST00000552422	ABHD14A-ACY1	A0A1B0GW23	586 aa		7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	SLC26A4	O43511	780 aa		7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	LEFTY1	O75610	366 aa		7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	CELA3A	P09093	270 aa		7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	CDC25A	P30304	524 aa		7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	DDIT3	P35638	169 aa		7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	GPC3	P51654	580 aa		7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	CRYBB1	P53674	252 aa	Predicted RBP	7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	NLRP11	P59045	1033 aa	Known RBP	7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	WDR5	P61964	334 aa	Known RBP	7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	SMAD3	P84022	425 aa	Known RBP	7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	CDC42EP1	Q00587	391 aa		7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	CEBPZ	Q03701	1054 aa	Known RBP	7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	GRIN1	Q05586	938 aa		7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	SLC39A14	Q15043	492 aa		7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	FAM109B	Q6ICB4	259 aa	Predicted RBP	7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	ZNF410	Q86VK4	478 aa		7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	FAM181A	Q8N9Y4	354 aa		7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	DBF4B	Q8NFT6	615 aa		7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	SEPT8	Q92599	483 aa		7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	CCDC43	Q96MW1	224 aa	Known RBP	7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	ZNF396	Q96N95	335 aa	Predicted RBP	7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	NT5C3A	Q9H0P0	336 aa		7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	BHMT2	Q9H2M3	363 aa		7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	ADAMTS10	Q9H324	1103 aa		7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	AGO3	Q9H9G7	860 aa	Known RBP	7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	ATP6V0A4	Q9HBG4	840 aa		7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	DDX19A	Q9NUU7	478 aa	Known RBP	7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	FBXO2	Q9UK22	296 aa	Predicted RBP	7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	CYP8B1	Q9UNU6	501 aa		7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	GINS2	Q9Y248	185 aa		7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	SLC5A6	Q9Y289	635 aa		7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	ZDHHC9	Q9Y397	364 aa		7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	COL4A3BP	Q9Y5P4	624 aa		7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	SLC4A7	Q9Y6M7	1214 aa		7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422	C5orf42	Q9H799	3197 aa		7.37	□□□□□ -1.23
CNOT2-238	ENST00000552422		A0A087WWV3	80 aa		7.36	□□□□□ -1.23
CNOT2-238	ENST00000552422	USO1	O60763	962 aa	Known RBP	7.36	□□□□□ -1.23
CNOT2-238	ENST00000552422	PPP6R2	O75170	966 aa		7.36	□□□□□ -1.23
CNOT2-238	ENST00000552422	RPS6KA5	O75582	802 aa		7.36	□□□□□ -1.23
CNOT2-238	ENST00000552422	YEATS4	O95619	227 aa		7.36	□□□□□ -1.23
CNOT2-238	ENST00000552422	ATP2A2	P16615	1042 aa	Known RBP	7.36	□□□□□ -1.23
CNOT2-238	ENST00000552422	EIF4B	P23588	611 aa	Known RBP	7.36	□□□□□ -1.23
CNOT2-238	ENST00000552422	MARCKS	P29966	332 aa	Predicted RBP	7.36	□□□□□ -1.23
CNOT2-238	ENST00000552422	GNA15	P30679	374 aa		7.36	□□□□□ -1.23
CNOT2-238	ENST00000552422	CD52	P31358	61 aa		7.36	□□□□□ -1.23
CNOT2-238	ENST00000552422	UBA7	P41226	1012 aa		7.36	□□□□□ -1.23
CNOT2-238	ENST00000552422	KCNJ6	P48051	423 aa		7.36	□□□□□ -1.23
CNOT2-238	ENST00000552422	DEFB103A	P81534	67 aa		7.36	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms