RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 POLIQ9UNA4 740 aa11.59□□□□□ -0.55
PFDN5-216ENST00000552341 PDCD11Q14690 1871 aaKnown RBP11.59□□□□□ -0.55
PFDN5-216ENST00000552341 CCDC66A2RUB6 948 aa11.59□□□□□ -0.55
PFDN5-216ENST00000552341 GNAT1P11488 350 aa11.59□□□□□ -0.55
PFDN5-216ENST00000552341 CCND3P30281 292 aaPredicted RBP11.59□□□□□ -0.55
PFDN5-216ENST00000552341 AXLP30530 894 aa11.59□□□□□ -0.55
PFDN5-216ENST00000552341 GUCY2FP51841 1108 aa11.59□□□□□ -0.55
PFDN5-216ENST00000552341 CRYBB1P53674 252 aaPredicted RBP11.59□□□□□ -0.55
PFDN5-216ENST00000552341 NOMO3P69849 1222 aa11.59□□□□□ -0.55
PFDN5-216ENST00000552341 ZBTB6Q15916 424 aa11.59□□□□□ -0.55
PFDN5-216ENST00000552341 NBPF20Q3BBV1 942 aa11.59□□□□□ -0.55
PFDN5-216ENST00000552341 C11orf63Q6NUN7 778 aa11.59□□□□□ -0.55
PFDN5-216ENST00000552341 MON1BQ7L1V2 547 aa11.59□□□□□ -0.55
PFDN5-216ENST00000552341 ZNF771Q7L3S4 317 aaPredicted RBP11.59□□□□□ -0.55
PFDN5-216ENST00000552341 NT5DC4Q86YG4 428 aa11.59□□□□□ -0.55
PFDN5-216ENST00000552341 MCOLN2Q8IZK6 566 aa11.59□□□□□ -0.55
PFDN5-216ENST00000552341 MMGT1Q8N4V1 131 aa11.59□□□□□ -0.55
PFDN5-216ENST00000552341 KLHDC9Q8NEP7 349 aa11.59□□□□□ -0.55
PFDN5-216ENST00000552341 CPA5Q8WXQ8 436 aa11.59□□□□□ -0.55
PFDN5-216ENST00000552341 ZMAT2Q96NC0 199 aaKnown RBP11.59□□□□□ -0.55
PFDN5-216ENST00000552341 SDCBP2Q9H190 292 aa11.59□□□□□ -0.55
PFDN5-216ENST00000552341 PLEKHA5Q9HAU0 1116 aa11.59□□□□□ -0.55
PFDN5-216ENST00000552341 CREBZFQ9NS37 354 aa11.59□□□□□ -0.55
PFDN5-216ENST00000552341 ZNF446Q9NWS9 450 aa11.59□□□□□ -0.55
PFDN5-216ENST00000552341 SNTG2Q9NY99 539 aa11.59□□□□□ -0.55
PFDN5-216ENST00000552341 CTTNBP2NLQ9P2B4 639 aa11.59□□□□□ -0.55
PFDN5-216ENST00000552341 THSD7BQ9C0I4 1608 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 KCNK3O14649 394 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 DDX3YO15523 660 aaKnown RBP11.58□□□□□ -0.56
PFDN5-216ENST00000552341 KRT19P08727 400 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 RHOXF2BP0C7M4 288 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 RARBP10826 455 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 ELNP15502 786 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 CD58P19256 250 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 ATICP31939 592 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 DNA2P51530 1060 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 C2orf54Q08AI8 447 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 PTP4A2Q12974 167 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 WDR72Q3MJ13 1102 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 CFAP221Q4G0U5 840 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 UBXN11Q5T124 520 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 MAP3K21Q5TCX8 1036 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 GDF6Q6KF10 455 aaPredicted RBP11.58□□□□□ -0.56
PFDN5-216ENST00000552341 TAF2Q6P1X5 1199 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 CD302Q8IX05 232 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 CAGE1Q8TC20 777 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 WHAMMQ8TF30 809 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 WNT8BQ93098 351 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 ZNF653Q96CK0 615 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 SNX27Q96L92 541 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 RHOXF2Q9BQY4 288 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 NUP85Q9BW27 656 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 NXF3Q9H4D5 531 aaKnown RBP11.58□□□□□ -0.56
PFDN5-216ENST00000552341 TMEM51Q9NW97 253 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 UVRAGQ9P2Y5 699 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 TMEM59LQ9UK28 342 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 AMFRQ9UKV5 643 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 HES2Q9Y543 173 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 ALG6Q9Y672 507 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 THAP12O43422 761 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 STAU1O95793 577 aaKnown RBP11.58□□□□□ -0.56
PFDN5-216ENST00000552341 PRKAR2AP13861 404 aaKnown RBP11.58□□□□□ -0.56
PFDN5-216ENST00000552341 POLR2BP30876 1174 aaKnown RBP11.58□□□□□ -0.56
PFDN5-216ENST00000552341 ZNF667Q5HYK9 610 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 DCAF12L1Q5VU92 463 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 NAA35Q5VZE5 725 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 SCARA5Q6ZMJ2 495 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 TRIM72Q6ZMU5 477 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 RASGEF1CQ8N431 466 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 TFAP2BQ92481 460 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 CD101Q93033 1021 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 PBKQ96KB5 322 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 AVENQ9NQS1 362 aaPredicted RBP11.58□□□□□ -0.56
PFDN5-216ENST00000552341 RBM12Q9NTZ6 932 aaKnown RBP11.58□□□□□ -0.56
PFDN5-216ENST00000552341 DPP3Q9NY33 737 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 NXF1Q9UBU9 619 aaKnown RBP11.58□□□□□ -0.56
PFDN5-216ENST00000552341 SRRDQ9UH36 339 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 ITGA11Q9UKX5 1188 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 DERAQ9Y315 318 aa11.58□□□□□ -0.56
PFDN5-216ENST00000552341 GRIN2DO15399 1336 aa11.57□□□□□ -0.56
PFDN5-216ENST00000552341 SCN1AP35498 2009 aa11.57□□□□□ -0.56
PFDN5-216ENST00000552341 ZRANB2O95218 330 aaKnown RBP eCLIP11.57□□□□□ -0.56
PFDN5-216ENST00000552341 CST5P28325 142 aaPredicted RBP11.57□□□□□ -0.56
PFDN5-216ENST00000552341 SSTR3P32745 418 aaPredicted RBP11.57□□□□□ -0.56
PFDN5-216ENST00000552341 RAP1GAPP47736 663 aa11.57□□□□□ -0.56
PFDN5-216ENST00000552341 CDH8P55286 799 aa11.57□□□□□ -0.56
PFDN5-216ENST00000552341 SLC20A2Q08357 652 aa11.57□□□□□ -0.56
PFDN5-216ENST00000552341 TERF2Q15554 542 aa11.57□□□□□ -0.56
PFDN5-216ENST00000552341 SESTD1Q86VW0 696 aa11.57□□□□□ -0.56
PFDN5-216ENST00000552341 PHF13Q86YI8 300 aaPredicted RBP11.57□□□□□ -0.56
PFDN5-216ENST00000552341 PASD1Q8IV76 773 aa11.57□□□□□ -0.56
PFDN5-216ENST00000552341 PIAS4Q8N2W9 510 aaPredicted RBP11.57□□□□□ -0.56
PFDN5-216ENST00000552341 USP38Q8NB14 1042 aa11.57□□□□□ -0.56
PFDN5-216ENST00000552341 ZNF564Q8TBZ8 553 aaPredicted RBP11.57□□□□□ -0.56
PFDN5-216ENST00000552341 ACTRT1Q8TDG2 376 aa11.57□□□□□ -0.56
PFDN5-216ENST00000552341 RPS6KC1Q96S38 1066 aa11.57□□□□□ -0.56
PFDN5-216ENST00000552341 CELF4Q9BZC1 486 aaKnown RBP11.57□□□□□ -0.56
PFDN5-216ENST00000552341 SMYD3Q9H7B4 428 aa11.57□□□□□ -0.56
PFDN5-216ENST00000552341 XPNPEP3Q9NQH7 507 aa11.57□□□□□ -0.56
PFDN5-216ENST00000552341 CNTN3Q9P232 1028 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms