RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 CACNA1BQ00975 2339 aa23.66■■□□□ 1.38
SMARCD1-212ENST00000551966 SFI1A8K8P3 1242 aa23.65■■□□□ 1.38
SMARCD1-212ENST00000551966 SLC30A4O14863 429 aa23.65■■□□□ 1.38
SMARCD1-212ENST00000551966 HARSP12081 509 aaKnown RBP23.65■■□□□ 1.38
SMARCD1-212ENST00000551966 HOXC13P31276 330 aa23.65■■□□□ 1.38
SMARCD1-212ENST00000551966 SOX9P48436 509 aa23.65■■□□□ 1.38
SMARCD1-212ENST00000551966 NEK4P51957 841 aa23.65■■□□□ 1.38
SMARCD1-212ENST00000551966 SIM2Q14190 667 aaPredicted RBP23.65■■□□□ 1.38
SMARCD1-212ENST00000551966 RINT1Q6NUQ1 792 aa23.65■■□□□ 1.38
SMARCD1-212ENST00000551966 C1orf186Q6ZWK4 172 aa23.65■■□□□ 1.38
SMARCD1-212ENST00000551966 TMC8Q8IU68 726 aa23.65■■□□□ 1.38
SMARCD1-212ENST00000551966 SPEM1Q8N4L4 309 aa23.65■■□□□ 1.38
SMARCD1-212ENST00000551966 IGSF22Q8N9C0 903 aa23.65■■□□□ 1.38
SMARCD1-212ENST00000551966 LEMD2Q8NC56 503 aa23.65■■□□□ 1.38
SMARCD1-212ENST00000551966 LRRC3BQ96PB8 259 aa23.65■■□□□ 1.38
SMARCD1-212ENST00000551966 NTPCRQ9BSD7 190 aaKnown RBP23.65■■□□□ 1.38
SMARCD1-212ENST00000551966 RUSC1Q9BVN2 902 aa23.65■■□□□ 1.38
SMARCD1-212ENST00000551966 SEMA4GQ9NTN9 838 aa23.65■■□□□ 1.38
SMARCD1-212ENST00000551966 C2orf42Q9NWW7 574 aa23.65■■□□□ 1.38
SMARCD1-212ENST00000551966 TUBGCP4Q9UGJ1 667 aa23.65■■□□□ 1.38
SMARCD1-212ENST00000551966 RBM19Q9Y4C8 960 aaKnown RBP23.65■■□□□ 1.38
SMARCD1-212ENST00000551966 TIMM13Q9Y5L4 95 aaPredicted RBP23.65■■□□□ 1.38
SMARCD1-212ENST00000551966 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.64■■□□□ 1.37
SMARCD1-212ENST00000551966 K7ESF4 209 aa23.64■■□□□ 1.37
SMARCD1-212ENST00000551966 OR4Q2P0C623 313 aa23.64■■□□□ 1.37
SMARCD1-212ENST00000551966 CPB1P15086 417 aa23.64■■□□□ 1.37
SMARCD1-212ENST00000551966 DMP1Q13316 513 aaPredicted RBP23.64■■□□□ 1.37
SMARCD1-212ENST00000551966 NETO1Q8TDF5 533 aa23.64■■□□□ 1.37
SMARCD1-212ENST00000551966 C8orf76Q96K31 380 aa23.64■■□□□ 1.37
SMARCD1-212ENST00000551966 GPR88Q9GZN0 384 aa23.64■■□□□ 1.37
SMARCD1-212ENST00000551966 DNAJC25Q9H1X3 360 aa23.64■■□□□ 1.37
SMARCD1-212ENST00000551966 YIPF1Q9Y548 306 aa23.64■■□□□ 1.37
SMARCD1-212ENST00000551966 A0A1W2PRU2 124 aa23.63■■□□□ 1.37
SMARCD1-212ENST00000551966 M0QZQ0 153 aa23.63■■□□□ 1.37
SMARCD1-212ENST00000551966 CHADO15335 359 aa23.63■■□□□ 1.37
SMARCD1-212ENST00000551966 SLC16A4O15374 487 aa23.63■■□□□ 1.37
SMARCD1-212ENST00000551966 GDF9O60383 454 aa23.63■■□□□ 1.37
SMARCD1-212ENST00000551966 LRP3O75074 770 aa23.63■■□□□ 1.37
SMARCD1-212ENST00000551966 OAZ2O95190 189 aa23.63■■□□□ 1.37
SMARCD1-212ENST00000551966 FCHO2Q0JRZ9 810 aa23.63■■□□□ 1.37
SMARCD1-212ENST00000551966 PPM1JQ5JR12 505 aa23.63■■□□□ 1.37
SMARCD1-212ENST00000551966 STXBP5Q5T5C0 1151 aa23.63■■□□□ 1.37
SMARCD1-212ENST00000551966 TXNDC11Q6PKC3 985 aa23.63■■□□□ 1.37
SMARCD1-212ENST00000551966 KCNK18Q7Z418 384 aa23.63■■□□□ 1.37
SMARCD1-212ENST00000551966 SNX29Q8TEQ0 813 aa23.63■■□□□ 1.37
SMARCD1-212ENST00000551966 PGLYRP2Q96PD5 576 aa23.63■■□□□ 1.37
SMARCD1-212ENST00000551966 DNM3Q9UQ16 869 aa23.63■■□□□ 1.37
SMARCD1-212ENST00000551966 TPRP12270 2363 aaKnown RBP23.63■■□□□ 1.37
SMARCD1-212ENST00000551966 CITO14578 2027 aa23.62■■□□□ 1.37
SMARCD1-212ENST00000551966 SLC38A8A6NNN8 435 aa23.62■■□□□ 1.37
SMARCD1-212ENST00000551966 PP2D1A8MPX8 630 aa23.62■■□□□ 1.37
SMARCD1-212ENST00000551966 MARCKSP29966 332 aaPredicted RBP23.62■■□□□ 1.37
SMARCD1-212ENST00000551966 CDC25AP30304 524 aa23.62■■□□□ 1.37
SMARCD1-212ENST00000551966 SPAG1Q07617 926 aa23.62■■□□□ 1.37
SMARCD1-212ENST00000551966 CSRP2Q16527 193 aa23.62■■□□□ 1.37
SMARCD1-212ENST00000551966 IL17AQ16552 155 aa23.62■■□□□ 1.37
SMARCD1-212ENST00000551966 PRR23CQ6ZRP0 262 aa23.62■■□□□ 1.37
SMARCD1-212ENST00000551966 Q6ZS52 159 aa23.62■■□□□ 1.37
SMARCD1-212ENST00000551966 CSGALNACT1Q8TDX6 532 aa23.62■■□□□ 1.37
SMARCD1-212ENST00000551966 E2F7Q96AV8 911 aa23.62■■□□□ 1.37
SMARCD1-212ENST00000551966 MKNK1Q9BUB5 465 aa23.62■■□□□ 1.37
SMARCD1-212ENST00000551966 HAPLN2Q9GZV7 340 aa23.62■■□□□ 1.37
SMARCD1-212ENST00000551966 SLITRK6Q9H5Y7 841 aa23.62■■□□□ 1.37
SMARCD1-212ENST00000551966 EPG5Q9HCE0 2579 aa23.62■■□□□ 1.37
SMARCD1-212ENST00000551966 PAPSS2O95340 614 aaPredicted RBP23.61■■□□□ 1.37
SMARCD1-212ENST00000551966 TOB1P50616 345 aaPredicted RBP23.61■■□□□ 1.37
SMARCD1-212ENST00000551966 DUSP4Q13115 394 aa23.61■■□□□ 1.37
SMARCD1-212ENST00000551966 ZBTB6Q15916 424 aa23.61■■□□□ 1.37
SMARCD1-212ENST00000551966 LONP2Q86WA8 852 aa23.61■■□□□ 1.37
SMARCD1-212ENST00000551966 ARID3BQ8IVW6 561 aaPredicted RBP23.61■■□□□ 1.37
SMARCD1-212ENST00000551966 YAF2Q8IY57 180 aa23.61■■□□□ 1.37
SMARCD1-212ENST00000551966 FBXO18Q8NFZ0 1043 aa23.61■■□□□ 1.37
SMARCD1-212ENST00000551966 TTC8Q8TAM2 541 aa23.61■■□□□ 1.37
SMARCD1-212ENST00000551966 DRC1Q96MC2 740 aa23.61■■□□□ 1.37
SMARCD1-212ENST00000551966 MMTAG2Q9BU76 263 aaKnown RBP23.61■■□□□ 1.37
SMARCD1-212ENST00000551966 C8orf33Q9H7E9 229 aaPredicted RBP23.61■■□□□ 1.37
SMARCD1-212ENST00000551966 MYBPHLA2RUH7 354 aa23.6■■□□□ 1.37
SMARCD1-212ENST00000551966 TOM1L1O75674 476 aa23.6■■□□□ 1.37
SMARCD1-212ENST00000551966 LRPAP1P30533 357 aa23.6■■□□□ 1.37
SMARCD1-212ENST00000551966 TRAPPC10P48553 1259 aa23.6■■□□□ 1.37
SMARCD1-212ENST00000551966 KPNA1P52294 538 aaPredicted RBP23.6■■□□□ 1.37
SMARCD1-212ENST00000551966 YWHAHQ04917 246 aaPredicted RBP23.6■■□□□ 1.37
SMARCD1-212ENST00000551966 GPR17Q13304 367 aa23.6■■□□□ 1.37
SMARCD1-212ENST00000551966 HEATR6Q6AI08 1181 aaKnown RBP23.6■■□□□ 1.37
SMARCD1-212ENST00000551966 GAREM2Q75VX8 874 aa23.6■■□□□ 1.37
SMARCD1-212ENST00000551966 C17orf75Q9HAS0 396 aa23.6■■□□□ 1.37
SMARCD1-212ENST00000551966 SLC27A5Q9Y2P5 690 aa23.6■■□□□ 1.37
SMARCD1-212ENST00000551966 PDCD11Q14690 1871 aaKnown RBP23.6■■□□□ 1.37
SMARCD1-212ENST00000551966 SPECC1L-ADORA2AF8WAN1 911 aa23.59■■□□□ 1.37
SMARCD1-212ENST00000551966 CNR2P34972 360 aa23.59■■□□□ 1.37
SMARCD1-212ENST00000551966 AARSP49588 968 aaKnown RBP eCLIP23.59■■□□□ 1.37
SMARCD1-212ENST00000551966 LRRC32Q14392 662 aa23.59■■□□□ 1.37
SMARCD1-212ENST00000551966 NOLC1Q14978 699 aaKnown RBP eCLIP23.59■■□□□ 1.37
SMARCD1-212ENST00000551966 CENPPQ6IPU0 288 aa23.59■■□□□ 1.37
SMARCD1-212ENST00000551966 CCDC83Q8IWF9 413 aa23.59■■□□□ 1.37
SMARCD1-212ENST00000551966 TMEM161BQ8NDZ6 487 aa23.59■■□□□ 1.37
SMARCD1-212ENST00000551966 MSANTD3Q96H12 275 aa23.59■■□□□ 1.37
SMARCD1-212ENST00000551966 ZFYVE19Q96K21 471 aa23.59■■□□□ 1.37
SMARCD1-212ENST00000551966 GTSE1Q9NYZ3 720 aa23.59■■□□□ 1.37
SMARCD1-212ENST00000551966 ANKFY1Q9P2R3 1169 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms