RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 NELFBQ8WX92 580 aa17.66■□□□□ 0.42
GCN1-209ENST00000551920 DHTKD1Q96HY7 919 aaPredicted RBP17.66■□□□□ 0.42
GCN1-209ENST00000551920 ANKRD36BP1Q96IX9 119 aa17.66■□□□□ 0.42
GCN1-209ENST00000551920 MSLNLQ96KJ4 702 aa17.66■□□□□ 0.42
GCN1-209ENST00000551920 FNBP1Q96RU3 617 aa17.66■□□□□ 0.42
GCN1-209ENST00000551920 DUSP9Q99956 384 aaKnown RBP17.66■□□□□ 0.42
GCN1-209ENST00000551920 EMILIN2Q9BXX0 1053 aa17.66■□□□□ 0.42
GCN1-209ENST00000551920 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.66■□□□□ 0.42
GCN1-209ENST00000551920 FNIP2Q9P278 1114 aa17.66■□□□□ 0.42
GCN1-209ENST00000551920 COG5Q9UP83 839 aa17.66■□□□□ 0.42
GCN1-209ENST00000551920 AGAP1Q9UPQ3 857 aa17.66■□□□□ 0.42
GCN1-209ENST00000551920 SSX2IPQ9Y2D8 614 aa17.66■□□□□ 0.42
GCN1-209ENST00000551920 FRMD4BQ9Y2L6 1034 aa17.66■□□□□ 0.42
GCN1-209ENST00000551920 TIMM13Q9Y5L4 95 aaPredicted RBP17.66■□□□□ 0.42
GCN1-209ENST00000551920 SCN1AP35498 2009 aa17.65■□□□□ 0.42
GCN1-209ENST00000551920 MAPK13O15264 365 aa17.65■□□□□ 0.42
GCN1-209ENST00000551920 TBC1D4O60343 1298 aa17.65■□□□□ 0.42
GCN1-209ENST00000551920 ADH1AP07327 375 aa17.65■□□□□ 0.42
GCN1-209ENST00000551920 TRIM49P0CI25 452 aa17.65■□□□□ 0.42
GCN1-209ENST00000551920 TRIM49CP0CI26 452 aa17.65■□□□□ 0.42
GCN1-209ENST00000551920 TNNI1P19237 187 aa17.65■□□□□ 0.42
GCN1-209ENST00000551920 RPL13P26373 211 aaKnown RBP17.65■□□□□ 0.42
GCN1-209ENST00000551920 TAF6P49848 677 aa17.65■□□□□ 0.42
GCN1-209ENST00000551920 KCNQ1P51787 676 aa17.65■□□□□ 0.42
GCN1-209ENST00000551920 MRPL58Q14197 206 aaKnown RBP17.65■□□□□ 0.42
GCN1-209ENST00000551920 CLUL1Q15846 466 aa17.65■□□□□ 0.42
GCN1-209ENST00000551920 DUOXA2Q1HG44 320 aa17.65■□□□□ 0.42
GCN1-209ENST00000551920 TDRD10Q5VZ19 366 aaKnown RBP17.65■□□□□ 0.42
GCN1-209ENST00000551920 RBM43Q6ZSC3 357 aaKnown RBP17.65■□□□□ 0.42
GCN1-209ENST00000551920 TRAPPC11Q7Z392 1133 aa17.65■□□□□ 0.42
GCN1-209ENST00000551920 FAM186BQ8IYM0 893 aa17.65■□□□□ 0.42
GCN1-209ENST00000551920 LRRC52Q8N7C0 313 aa17.65■□□□□ 0.42
GCN1-209ENST00000551920 TMC2Q8TDI7 906 aa17.65■□□□□ 0.42
GCN1-209ENST00000551920 CACTINQ8WUQ7 758 aaKnown RBP17.65■□□□□ 0.42
GCN1-209ENST00000551920 SENP8Q96LD8 212 aa17.65■□□□□ 0.42
GCN1-209ENST00000551920 MED15Q96RN5 788 aa17.65■□□□□ 0.42
GCN1-209ENST00000551920 PLXNA3P51805 1871 aa17.65■□□□□ 0.42
GCN1-209ENST00000551920 TNNC2P02585 160 aa17.64■□□□□ 0.41
GCN1-209ENST00000551920 KRT19P08727 400 aa17.64■□□□□ 0.41
GCN1-209ENST00000551920 KLRC2P26717 231 aa17.64■□□□□ 0.41
GCN1-209ENST00000551920 STIM1Q13586 685 aa17.64■□□□□ 0.41
GCN1-209ENST00000551920 DPCR1Q3MIW9 517 aa17.64■□□□□ 0.41
GCN1-209ENST00000551920 SYCE2Q6PIF2 218 aa17.64■□□□□ 0.41
GCN1-209ENST00000551920 DSTYKQ6XUX3 929 aa17.64■□□□□ 0.41
GCN1-209ENST00000551920 ANKS3Q6ZW76 656 aa17.64■□□□□ 0.41
GCN1-209ENST00000551920 ZNF560Q96MR9 790 aa17.64■□□□□ 0.41
GCN1-209ENST00000551920 TSG101Q99816 390 aa17.64■□□□□ 0.41
GCN1-209ENST00000551920 BACE2Q9Y5Z0 518 aa17.64■□□□□ 0.41
GCN1-209ENST00000551920 C5orf42Q9H799 3197 aa17.64■□□□□ 0.41
GCN1-209ENST00000551920 FSD2A1L4K1 749 aa17.63■□□□□ 0.41
GCN1-209ENST00000551920 KPNA7A9QM74 516 aa17.63■□□□□ 0.41
GCN1-209ENST00000551920 TGM5O43548 720 aa17.63■□□□□ 0.41
GCN1-209ENST00000551920 MBD3O95983 291 aa17.63■□□□□ 0.41
GCN1-209ENST00000551920 PSMC2P35998 433 aaKnown RBP17.63■□□□□ 0.41
GCN1-209ENST00000551920 PPP1R2P41236 205 aa17.63■□□□□ 0.41
GCN1-209ENST00000551920 PNPLA4P41247 253 aa17.63■□□□□ 0.41
GCN1-209ENST00000551920 VAMP7P51809 220 aa17.63■□□□□ 0.41
GCN1-209ENST00000551920 STX17P56962 302 aa17.63■□□□□ 0.41
GCN1-209ENST00000551920 MCCD1P59942 119 aaPredicted RBP17.63■□□□□ 0.41
GCN1-209ENST00000551920 RBP5P82980 135 aa17.63■□□□□ 0.41
GCN1-209ENST00000551920 FKBP3Q00688 224 aaKnown RBP17.63■□□□□ 0.41
GCN1-209ENST00000551920 CREMQ03060 361 aa17.63■□□□□ 0.41
GCN1-209ENST00000551920 BFSP1Q12934 665 aa17.63■□□□□ 0.41
GCN1-209ENST00000551920 PAK1Q13153 545 aa17.63■□□□□ 0.41
GCN1-209ENST00000551920 LEXMQ3ZCV2 418 aa17.63■□□□□ 0.41
GCN1-209ENST00000551920 SV2CQ496J9 727 aa17.63■□□□□ 0.41
GCN1-209ENST00000551920 ANKRD54Q6NXT1 300 aa17.63■□□□□ 0.41
GCN1-209ENST00000551920 PDXDC1Q6P996 788 aa17.63■□□□□ 0.41
GCN1-209ENST00000551920 LILRA6Q6PI73 481 aa17.63■□□□□ 0.41
GCN1-209ENST00000551920 PALB2Q86YC2 1186 aa17.63■□□□□ 0.41
GCN1-209ENST00000551920 SMRP1Q8NCR6 262 aa17.63■□□□□ 0.41
GCN1-209ENST00000551920 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.63■□□□□ 0.41
GCN1-209ENST00000551920 MKNK1Q9BUB5 465 aa17.63■□□□□ 0.41
GCN1-209ENST00000551920 XYLT2Q9H1B5 865 aa17.63■□□□□ 0.41
GCN1-209ENST00000551920 CDH22Q9UJ99 828 aa17.63■□□□□ 0.41
GCN1-209ENST00000551920 FBXL5Q9UKA1 691 aa17.63■□□□□ 0.41
GCN1-209ENST00000551920 CDY1Q9Y6F8 540 aa17.63■□□□□ 0.41
GCN1-209ENST00000551920 CYB561D2O14569 222 aa17.62■□□□□ 0.41
GCN1-209ENST00000551920 CETN3O15182 167 aa17.62■□□□□ 0.41
GCN1-209ENST00000551920 SLC16A3O15427 465 aaKnown RBP17.62■□□□□ 0.41
GCN1-209ENST00000551920 OAZ2O95190 189 aa17.62■□□□□ 0.41
GCN1-209ENST00000551920 VNN1O95497 513 aa17.62■□□□□ 0.41
GCN1-209ENST00000551920 GLUD1P00367 558 aa17.62■□□□□ 0.41
GCN1-209ENST00000551920 CST3P01034 146 aaPredicted RBP17.62■□□□□ 0.41
GCN1-209ENST00000551920 C4BPAP04003 597 aaKnown RBP17.62■□□□□ 0.41
GCN1-209ENST00000551920 CYP11A1P05108 521 aa17.62■□□□□ 0.41
GCN1-209ENST00000551920 SPATA31D3P0C874 917 aa17.62■□□□□ 0.41
GCN1-209ENST00000551920 ODC1P11926 461 aa17.62■□□□□ 0.41
GCN1-209ENST00000551920 TYMPP19971 482 aa17.62■□□□□ 0.41
GCN1-209ENST00000551920 OR1D2P34982 312 aa17.62■□□□□ 0.41
GCN1-209ENST00000551920 ROR1Q01973 937 aa17.62■□□□□ 0.41
GCN1-209ENST00000551920 YWHAHQ04917 246 aaPredicted RBP17.62■□□□□ 0.41
GCN1-209ENST00000551920 PPP3CAQ08209 521 aa17.62■□□□□ 0.41
GCN1-209ENST00000551920 WSCD1Q658N2 575 aa17.62■□□□□ 0.41
GCN1-209ENST00000551920 SLC8B1Q6J4K2 584 aa17.62■□□□□ 0.41
GCN1-209ENST00000551920 FOXR2Q6PJQ5 311 aa17.62■□□□□ 0.41
GCN1-209ENST00000551920 C15orf39Q6ZRI6 1047 aa17.62■□□□□ 0.41
GCN1-209ENST00000551920 SPATA31D4Q6ZUB0 917 aa17.62■□□□□ 0.41
GCN1-209ENST00000551920 INTS8Q75QN2 995 aaKnown RBP17.62■□□□□ 0.41
GCN1-209ENST00000551920 PPFIBP1Q86W92 1011 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms