RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 TPH2Q8IWU9 490 aa15.9■□□□□ 0.14
VPS29-209ENST00000551655 CHCHD4Q8N4Q1 142 aa15.9■□□□□ 0.14
VPS29-209ENST00000551655 ADAM32Q8TC27 787 aa15.9■□□□□ 0.14
VPS29-209ENST00000551655 HAS1Q92839 578 aa15.9■□□□□ 0.14
VPS29-209ENST00000551655 ESYT1Q9BSJ8 1104 aa15.9■□□□□ 0.14
VPS29-209ENST00000551655 ZSWIM4Q9H7M6 989 aa15.9■□□□□ 0.14
VPS29-209ENST00000551655 KCNMB3Q9NPA1 279 aa15.9■□□□□ 0.14
VPS29-209ENST00000551655 PCDHA4Q9UN74 947 aa15.9■□□□□ 0.14
VPS29-209ENST00000551655 YIPF1Q9Y548 306 aa15.9■□□□□ 0.14
VPS29-209ENST00000551655 MYO16Q9Y6X6 1858 aa15.89■□□□□ 0.13
VPS29-209ENST00000551655 CCDC196A0A1B0GTZ2 297 aa15.89■□□□□ 0.13
VPS29-209ENST00000551655 TRAPPC3O43617 180 aa15.89■□□□□ 0.13
VPS29-209ENST00000551655 MAPK8P45983 427 aa15.89■□□□□ 0.13
VPS29-209ENST00000551655 SIM1P81133 766 aaPredicted RBP15.89■□□□□ 0.13
VPS29-209ENST00000551655 NPY5RQ15761 445 aa15.89■□□□□ 0.13
VPS29-209ENST00000551655 CTXN3Q4LDR2 81 aa15.89■□□□□ 0.13
VPS29-209ENST00000551655 ARHGAP29Q52LW3 1261 aa15.89■□□□□ 0.13
VPS29-209ENST00000551655 DIEXFQ68CQ4 756 aaKnown RBP15.89■□□□□ 0.13
VPS29-209ENST00000551655 MOXD1Q6UVY6 613 aa15.89■□□□□ 0.13
VPS29-209ENST00000551655 SMG9Q9H0W8 520 aaKnown RBP15.89■□□□□ 0.13
VPS29-209ENST00000551655 DNAJC25Q9H1X3 360 aa15.89■□□□□ 0.13
VPS29-209ENST00000551655 CRISPLD1Q9H336 500 aa15.89■□□□□ 0.13
VPS29-209ENST00000551655 FZD8Q9H461 694 aa15.89■□□□□ 0.13
VPS29-209ENST00000551655 FBRSL1Q9HCM7 1045 aaKnown RBP15.89■□□□□ 0.13
VPS29-209ENST00000551655 PRMT7Q9NVM4 692 aaPredicted RBP15.89■□□□□ 0.13
VPS29-209ENST00000551655 KIAA1549LQ6ZVL6 1849 aa15.89■□□□□ 0.13
VPS29-209ENST00000551655 OTOL1A6NHN0 477 aaPredicted RBP15.88■□□□□ 0.13
VPS29-209ENST00000551655 DPYSL4O14531 572 aa15.88■□□□□ 0.13
VPS29-209ENST00000551655 N4BP3O15049 544 aa15.88■□□□□ 0.13
VPS29-209ENST00000551655 USO1O60763 962 aaKnown RBP15.88■□□□□ 0.13
VPS29-209ENST00000551655 SLITRK3O94933 977 aa15.88■□□□□ 0.13
VPS29-209ENST00000551655 VNN2O95498 520 aa15.88■□□□□ 0.13
VPS29-209ENST00000551655 BCKDHBP21953 392 aa15.88■□□□□ 0.13
VPS29-209ENST00000551655 FAM193AP78312 1265 aa15.88■□□□□ 0.13
VPS29-209ENST00000551655 SCAPQ12770 1279 aa15.88■□□□□ 0.13
VPS29-209ENST00000551655 MRPL58Q14197 206 aaKnown RBP15.88■□□□□ 0.13
VPS29-209ENST00000551655 ITPRIPL2Q3MIP1 535 aa15.88■□□□□ 0.13
VPS29-209ENST00000551655 TMEM196Q5HYL7 178 aa15.88■□□□□ 0.13
VPS29-209ENST00000551655 TPGS2Q68CL5 300 aa15.88■□□□□ 0.13
VPS29-209ENST00000551655 PMS2CLQ68D20 193 aa15.88■□□□□ 0.13
VPS29-209ENST00000551655 HAUS6Q7Z4H7 955 aa15.88■□□□□ 0.13
VPS29-209ENST00000551655 BLIDQ8IZY5 108 aa15.88■□□□□ 0.13
VPS29-209ENST00000551655 LEMD2Q8NC56 503 aa15.88■□□□□ 0.13
VPS29-209ENST00000551655 HNRNPLLQ8WVV9 542 aaKnown RBP15.88■□□□□ 0.13
VPS29-209ENST00000551655 BRF1Q92994 677 aa15.88■□□□□ 0.13
VPS29-209ENST00000551655 PGLYRP2Q96PD5 576 aa15.88■□□□□ 0.13
VPS29-209ENST00000551655 RNF26Q9BY78 433 aaPredicted RBP15.88■□□□□ 0.13
VPS29-209ENST00000551655 TPSD1Q9BZJ3 242 aa15.88■□□□□ 0.13
VPS29-209ENST00000551655 GPR88Q9GZN0 384 aa15.88■□□□□ 0.13
VPS29-209ENST00000551655 NCOA5Q9HCD5 579 aaKnown RBP15.88■□□□□ 0.13
VPS29-209ENST00000551655 AFF4Q9UHB7 1163 aaKnown RBP15.88■□□□□ 0.13
VPS29-209ENST00000551655 PCNX2A6NKB5 2137 aa15.88■□□□□ 0.13
VPS29-209ENST00000551655 NID2Q14112 1375 aa15.87■□□□□ 0.13
VPS29-209ENST00000551655 TENM4Q6N022 2769 aa15.87■□□□□ 0.13
VPS29-209ENST00000551655 ATG13O75143 517 aa15.87■□□□□ 0.13
VPS29-209ENST00000551655 DGAT1O75907 488 aa15.87■□□□□ 0.13
VPS29-209ENST00000551655 OR4Q2P0C623 313 aa15.87■□□□□ 0.13
VPS29-209ENST00000551655 CPB1P15086 417 aa15.87■□□□□ 0.13
VPS29-209ENST00000551655 PRPF4BQ13523 1007 aaKnown RBP15.87■□□□□ 0.13
VPS29-209ENST00000551655 GPR158Q5T848 1215 aa15.87■□□□□ 0.13
VPS29-209ENST00000551655 TRIM68Q6AZZ1 485 aa15.87■□□□□ 0.13
VPS29-209ENST00000551655 Q6ZUG5 572 aa15.87■□□□□ 0.13
VPS29-209ENST00000551655 GAREM2Q75VX8 874 aa15.87■□□□□ 0.13
VPS29-209ENST00000551655 CYP2U1Q7Z449 544 aa15.87■□□□□ 0.13
VPS29-209ENST00000551655 TMEM130Q8N3G9 435 aa15.87■□□□□ 0.13
VPS29-209ENST00000551655 CAMKK1Q8N5S9 505 aa15.87■□□□□ 0.13
VPS29-209ENST00000551655 BSNDQ8WZ55 320 aa15.87■□□□□ 0.13
VPS29-209ENST00000551655 PRIMPOLQ96LW4 560 aa15.87■□□□□ 0.13
VPS29-209ENST00000551655 FAM20AQ96MK3 541 aa15.87■□□□□ 0.13
VPS29-209ENST00000551655 UROC1Q96N76 676 aa15.87■□□□□ 0.13
VPS29-209ENST00000551655 POLR3CQ9BUI4 534 aaPredicted RBP15.87■□□□□ 0.13
VPS29-209ENST00000551655 ADAMTS9Q9P2N4 1935 aa15.86■□□□□ 0.13
VPS29-209ENST00000551655 SMIM28A0A1B0GU29 152 aa15.86■□□□□ 0.13
VPS29-209ENST00000551655 PODXLO00592 558 aa15.86■□□□□ 0.13
VPS29-209ENST00000551655 ABCB7O75027 752 aa15.86■□□□□ 0.13
VPS29-209ENST00000551655 PRB1P04280 392 aa15.86■□□□□ 0.13
VPS29-209ENST00000551655 DGKEP52429 567 aa15.86■□□□□ 0.13
VPS29-209ENST00000551655 GRSF1Q12849 480 aaKnown RBP eCLIP15.86■□□□□ 0.13
VPS29-209ENST00000551655 KARSQ15046 597 aaKnown RBP15.86■□□□□ 0.13
VPS29-209ENST00000551655 CDCA2Q69YH5 1023 aaPredicted RBP15.86■□□□□ 0.13
VPS29-209ENST00000551655 CEP120Q8N960 986 aa15.86■□□□□ 0.13
VPS29-209ENST00000551655 RPLP0P6Q8NHW5 317 aa15.86■□□□□ 0.13
VPS29-209ENST00000551655 BPIFB1Q8TDL5 484 aa15.86■□□□□ 0.13
VPS29-209ENST00000551655 PIGOQ8TEQ8 1089 aa15.86■□□□□ 0.13
VPS29-209ENST00000551655 PIGKQ92643 395 aa15.86■□□□□ 0.13
VPS29-209ENST00000551655 AIFM3Q96NN9 605 aa15.86■□□□□ 0.13
VPS29-209ENST00000551655 C22orf23Q9BZE7 217 aa15.86■□□□□ 0.13
VPS29-209ENST00000551655 HPS4Q9NQG7 708 aa15.86■□□□□ 0.13
VPS29-209ENST00000551655 FSCN3Q9NQT6 498 aa15.86■□□□□ 0.13
VPS29-209ENST00000551655 CCDC194A0A1B0GVG4 234 aa15.85■□□□□ 0.13
VPS29-209ENST00000551655 H7C4K7 107 aa15.85■□□□□ 0.13
VPS29-209ENST00000551655 SOAT2O75908 522 aa15.85■□□□□ 0.13
VPS29-209ENST00000551655 DHPSP49366 369 aaPredicted RBP15.85■□□□□ 0.13
VPS29-209ENST00000551655 RARRES1P49788 294 aa15.85■□□□□ 0.13
VPS29-209ENST00000551655 CCT2P78371 535 aaKnown RBP15.85■□□□□ 0.13
VPS29-209ENST00000551655 CYP4F8P98187 520 aa15.85■□□□□ 0.13
VPS29-209ENST00000551655 FAM187BQ17R55 369 aa15.85■□□□□ 0.13
VPS29-209ENST00000551655 ZBTB8OSQ8IWT0 167 aa15.85■□□□□ 0.13
VPS29-209ENST00000551655 EZH1Q92800 747 aaPredicted RBP15.85■□□□□ 0.13
VPS29-209ENST00000551655 LRIG1Q96JA1 1093 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms