RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 ADCY2Q08462 1091 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 SLFN5Q08AF3 891 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 NEXNQ0ZGT2 675 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 DBPQ10586 325 aaPredicted RBP2.87□□□□□ -1.95
CPSF6-207ENST00000551516 MLC1Q15049 377 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 ACAP2Q15057 778 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 LRRC41Q15345 812 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 PUM3Q15397 648 aaKnown RBP2.87□□□□□ -1.95
CPSF6-207ENST00000551516 FSCN1Q16658 493 aaKnown RBP2.87□□□□□ -1.95
CPSF6-207ENST00000551516 CCDC57Q2TAC2 916 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 SLC4A8Q2Y0W8 1093 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 GFOD2Q3B7J2 385 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 PLEKHN1Q494U1 663 aaPredicted RBP2.87□□□□□ -1.95
CPSF6-207ENST00000551516 CT83Q5H943 113 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 TMEM240Q5SV17 173 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 C9orf50Q5SZB4 431 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 FAM102BQ5T8I3 360 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 PRAMEF9Q5VWM5 478 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 VASNQ6EMK4 673 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 TEPPQ6URK8 271 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 CD300LDQ6UXZ3 194 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 C14orf80Q86SX3 495 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 CXorf67Q86X51 503 aaPredicted RBP2.87□□□□□ -1.95
CPSF6-207ENST00000551516 CILP2Q8IUL8 1156 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 CMIPQ8IY22 773 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 TCEAL8Q8IYN2 117 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 TDHQ8IZJ6 230 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 ABI1Q8IZP0 508 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 CPA6Q8N4T0 437 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 DEFB123Q8N688 67 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 ANKRD13CQ8N6S4 541 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 REPS2Q8NFH8 660 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 TGFBRAP1Q8WUH2 860 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 LPIN2Q92539 896 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 RAX2Q96IS3 184 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 P2RX7Q99572 595 aaKnown RBP2.87□□□□□ -1.95
CPSF6-207ENST00000551516 ANO3Q9BYT9 981 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 WNT8AQ9H1J5 351 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 MS4A5Q9H3V2 200 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 MYH16Q9H6N6 1097 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 TCF7L1Q9HCS4 588 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 ALG13Q9NP73 1137 aaKnown RBP2.87□□□□□ -1.95
CPSF6-207ENST00000551516 USP40Q9NVE5 1235 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 UCKL1Q9NWZ5 548 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 DNAJC28Q9NX36 388 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 HSPBP1Q9NZL4 362 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 HMG20BQ9P0W2 317 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 BTBD7Q9P203 1132 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 PNMA8BQ9ULN7 279 aaPredicted RBP2.87□□□□□ -1.95
CPSF6-207ENST00000551516 NOB1Q9ULX3 412 aaKnown RBP2.87□□□□□ -1.95
CPSF6-207ENST00000551516 PA2G4Q9UQ80 394 aaKnown RBP2.87□□□□□ -1.95
CPSF6-207ENST00000551516 TNNQ9UQP3 1299 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 INVSQ9Y283 1065 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 HCFC2Q9Y5Z7 792 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 CFAP54Q96N23 3096 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 MUC6Q6W4X9 2439 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 SIPA1L1O43166 1804 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 DMDP11532 3685 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 WDR87Q6ZQQ6 2873 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 LCHNA4D1U4 455 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 HRKO00198 91 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 ADCY6O43306 1168 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 PLIN1O60240 522 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 CAND2O75155 1236 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 H2AFYO75367 372 aaKnown RBP2.86□□□□□ -1.95
CPSF6-207ENST00000551516 FRAT2O75474 233 aaPredicted RBP2.86□□□□□ -1.95
CPSF6-207ENST00000551516 IL33O95760 270 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 PRLP01236 227 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 HMGCRP04035 888 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 CLEC2LP0C7M8 214 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 TMEM253P0C7T8 217 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 PF4V1P10720 104 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 SYN1P17600 705 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 ENPP1P22413 925 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 STAT5AP42229 794 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 MCAMP43121 646 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 CDK7P50613 346 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 SLC5A3P53794 718 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 MANFP55145 182 aaKnown RBP2.86□□□□□ -1.95
CPSF6-207ENST00000551516 BACE1P56817 501 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 BCAR1P56945 870 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 YBX1P67809 324 aaKnown RBP2.86□□□□□ -1.95
CPSF6-207ENST00000551516 ZNF200P98182 395 aaPredicted RBP2.86□□□□□ -1.95
CPSF6-207ENST00000551516 PFKPQ01813 784 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 SLC6A3Q01959 620 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 MECOMQ03112 1051 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 TCP10Q12799 353 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 SPP2Q13103 211 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 GRB14Q14449 540 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 HLTFQ14527 1009 aaKnown RBP eCLIP2.86□□□□□ -1.95
CPSF6-207ENST00000551516 GPNMBQ14956 572 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 SHHQ15465 462 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 TARBP2Q15633 366 aaKnown RBP2.86□□□□□ -1.95
CPSF6-207ENST00000551516 MINDY4Q4G0A6 757 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 TOR2AQ5JU69 321 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 FYB2Q5VWT5 728 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 CD276Q5ZPR3 534 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 NXNQ6DKJ4 435 aa2.86□□□□□ -1.95
CPSF6-207ENST00000551516 CXorf57Q6NSI4 855 aaKnown RBP2.86□□□□□ -1.95
CPSF6-207ENST00000551516 KIAA1841Q6NSI8 718 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms