RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 WDCPQ9H6R7 721 aa6.38□□□□□ -1.39
CPSF6-206ENST00000550987 BCO1Q9HAY6 547 aa6.38□□□□□ -1.39
CPSF6-206ENST00000550987 STARD7Q9NQZ5 370 aa6.38□□□□□ -1.39
CPSF6-206ENST00000550987 PCDHA6Q9UN73 950 aa6.38□□□□□ -1.39
CPSF6-206ENST00000550987 SPATA31A1Q5TZJ5 1347 aa6.38□□□□□ -1.39
CPSF6-206ENST00000550987 IRS2Q9Y4H2 1338 aa6.38□□□□□ -1.39
CPSF6-206ENST00000550987 HFM1A2PYH4 1435 aa6.38□□□□□ -1.39
CPSF6-206ENST00000550987 SPATA31E1Q6ZUB1 1445 aa6.38□□□□□ -1.39
CPSF6-206ENST00000550987 CEP152O94986 1710 aa6.38□□□□□ -1.39
CPSF6-206ENST00000550987 TRANK1O15050 2925 aa6.37□□□□□ -1.39
CPSF6-206ENST00000550987 ADAMTS13Q76LX8 1427 aa6.37□□□□□ -1.39
CPSF6-206ENST00000550987 DHX29Q7Z478 1369 aaKnown RBP6.37□□□□□ -1.39
CPSF6-206ENST00000550987 POM121BA6NF01 834 aa6.37□□□□□ -1.39
CPSF6-206ENST00000550987 FRS3O43559 492 aa6.37□□□□□ -1.39
CPSF6-206ENST00000550987 ALDH1A2O94788 518 aa6.37□□□□□ -1.39
CPSF6-206ENST00000550987 KNG1P01042 644 aa6.37□□□□□ -1.39
CPSF6-206ENST00000550987 VEGFAP15692 232 aaPredicted RBP6.37□□□□□ -1.39
CPSF6-206ENST00000550987 DDCP20711 480 aa6.37□□□□□ -1.39
CPSF6-206ENST00000550987 ABCB4P21439 1286 aa6.37□□□□□ -1.39
CPSF6-206ENST00000550987 SLC6A9P48067 706 aa6.37□□□□□ -1.39
CPSF6-206ENST00000550987 MRE11P49959 708 aa6.37□□□□□ -1.39
CPSF6-206ENST00000550987 CASP5P51878 434 aa6.37□□□□□ -1.39
CPSF6-206ENST00000550987 TARDBPQ13148 414 aaKnown RBP eCLIP6.37□□□□□ -1.39
CPSF6-206ENST00000550987 GRM1Q13255 1194 aa6.37□□□□□ -1.39
CPSF6-206ENST00000550987 SNAPC2Q13487 334 aa6.37□□□□□ -1.39
CPSF6-206ENST00000550987 CNGA2Q16280 664 aa6.37□□□□□ -1.39
CPSF6-206ENST00000550987 MST1LQ2TV78 715 aa6.37□□□□□ -1.39
CPSF6-206ENST00000550987 PIK3C3Q8NEB9 887 aa6.37□□□□□ -1.39
CPSF6-206ENST00000550987 OR7D4Q8NG98 312 aa6.37□□□□□ -1.39
CPSF6-206ENST00000550987 IL31RAQ8NI17 732 aa6.37□□□□□ -1.39
CPSF6-206ENST00000550987 BRIX1Q8TDN6 353 aaKnown RBP6.37□□□□□ -1.39
CPSF6-206ENST00000550987 MZB1Q8WU39 189 aa6.37□□□□□ -1.39
CPSF6-206ENST00000550987 STON2Q8WXE9 905 aa6.37□□□□□ -1.39
CPSF6-206ENST00000550987 SAMD11Q96NU1 681 aa6.37□□□□□ -1.39
CPSF6-206ENST00000550987 DIRC2Q96SL1 478 aa6.37□□□□□ -1.39
CPSF6-206ENST00000550987 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.37□□□□□ -1.39
CPSF6-206ENST00000550987 CNTD2Q9H8S5 307 aa6.37□□□□□ -1.39
CPSF6-206ENST00000550987 ATP6V0A4Q9HBG4 840 aa6.37□□□□□ -1.39
CPSF6-206ENST00000550987 LANCL2Q9NS86 450 aa6.37□□□□□ -1.39
CPSF6-206ENST00000550987 PIH1D1Q9NWS0 290 aaKnown RBP6.37□□□□□ -1.39
CPSF6-206ENST00000550987 VWA7Q9Y334 891 aa6.37□□□□□ -1.39
CPSF6-206ENST00000550987 PCDHA5Q9Y5H7 936 aa6.37□□□□□ -1.39
CPSF6-206ENST00000550987 PRUNE2Q8WUY3 3088 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 PARP4Q9UKK3 1724 aaKnown RBP6.36□□□□□ -1.39
CPSF6-206ENST00000550987 PASKQ96RG2 1323 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 KLRG2A4D1S0 409 aaPredicted RBP6.36□□□□□ -1.39
CPSF6-206ENST00000550987 ISM1B1AKI9 464 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 GASTP01350 101 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 FGAP02671 866 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 IL13P35225 146 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 PPM1AP35813 382 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 CDR1P51861 262 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 GP2P55259 537 aaKnown RBP6.36□□□□□ -1.39
CPSF6-206ENST00000550987 SUMO3P55854 103 aaPredicted RBP6.36□□□□□ -1.39
CPSF6-206ENST00000550987 FMO1Q01740 532 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 ZNF543Q08ER8 600 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 BIRC3Q13489 604 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 EIF4HQ15056 248 aaKnown RBP6.36□□□□□ -1.39
CPSF6-206ENST00000550987 ATP2B3Q16720 1220 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 DEFB115Q30KQ5 88 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 TMEM95Q3KNT9 176 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 FLYWCH1Q4VC44 716 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 DGKKQ5KSL6 1271 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 KRT40Q6A162 431 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 CCDC174Q6PII3 467 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 TMED8Q6PL24 325 aaPredicted RBP6.36□□□□□ -1.39
CPSF6-206ENST00000550987 LIX1LQ8IVB5 337 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 BCL6BQ8N143 479 aaPredicted RBP6.36□□□□□ -1.39
CPSF6-206ENST00000550987 PLA2G15Q8NCC3 412 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 PNISRQ8TF01 805 aaKnown RBP6.36□□□□□ -1.39
CPSF6-206ENST00000550987 ANKS1AQ92625 1134 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 HOXB13Q92826 284 aaPredicted RBP6.36□□□□□ -1.39
CPSF6-206ENST00000550987 NKD2Q969F2 451 aaPredicted RBP6.36□□□□□ -1.39
CPSF6-206ENST00000550987 SUCLG2Q96I99 432 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 MRGPRX4Q96LA9 322 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 DMRTA2Q96SC8 542 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 UNKQ9C0B0 810 aaKnown RBP6.36□□□□□ -1.39
CPSF6-206ENST00000550987 WDR12Q9GZL7 423 aaKnown RBP6.36□□□□□ -1.39
CPSF6-206ENST00000550987 NSUN3Q9H649 340 aaKnown RBP6.36□□□□□ -1.39
CPSF6-206ENST00000550987 L2HGDHQ9H9P8 463 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 GNL3LQ9NVN8 582 aaKnown RBP6.36□□□□□ -1.39
CPSF6-206ENST00000550987 CDC23Q9UJX2 597 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 AJAP1Q9UKB5 411 aaPredicted RBP6.36□□□□□ -1.39
CPSF6-206ENST00000550987 PADI4Q9UM07 663 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 MAGED2Q9UNF1 606 aaPredicted RBP6.36□□□□□ -1.39
CPSF6-206ENST00000550987 SIK3Q9Y2K2 1263 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 RBM8AQ9Y5S9 174 aaKnown RBP6.36□□□□□ -1.39
CPSF6-206ENST00000550987 CDC42BPAQ5VT25 1732 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 KNDC1Q76NI1 1749 aa6.36□□□□□ -1.39
CPSF6-206ENST00000550987 MAST4O15021 2626 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 CEP290O15078 2479 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 PNPLA7Q6ZV29 1317 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 LRRC10BA6NIK2 292 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 DDX3XO00571 662 aaKnown RBP eCLIP6.35□□□□□ -1.394e-13■□□□□ 9.3
CPSF6-206ENST00000550987 CA12O43570 354 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 NCK2O43639 380 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 PIP5K1CO60331 668 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 PEX10O60683 326 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 GPR32O75388 356 aa6.35□□□□□ -1.39
CPSF6-206ENST00000550987 IL18RAPO95256 599 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms