RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 BRD9Q9H8M2 597 aa14.02□□□□□ -0.17
PTCH1-221ENST00000550914 ANKFY1Q9P2R3 1169 aa14.02□□□□□ -0.17
PTCH1-221ENST00000550914 ACACBO00763 2458 aa14.01□□□□□ -0.17
PTCH1-221ENST00000550914 TTC26A0AVF1 554 aa14.01□□□□□ -0.17
PTCH1-221ENST00000550914 SHISA7A6NL88 538 aa14.01□□□□□ -0.17
PTCH1-221ENST00000550914 SFI1A8K8P3 1242 aa14.01□□□□□ -0.17
PTCH1-221ENST00000550914 SLC26A4O43511 780 aa14.01□□□□□ -0.17
PTCH1-221ENST00000550914 PSMC3P17980 439 aa14.01□□□□□ -0.17
PTCH1-221ENST00000550914 AARSP49588 968 aaKnown RBP eCLIP14.01□□□□□ -0.17
PTCH1-221ENST00000550914 SLC12A3P55017 1021 aa14.01□□□□□ -0.17
PTCH1-221ENST00000550914 MLLT6P55198 1093 aaPredicted RBP14.01□□□□□ -0.17
PTCH1-221ENST00000550914 ZBTB6Q15916 424 aa14.01□□□□□ -0.17
PTCH1-221ENST00000550914 ARL6IP4Q66PJ3 421 aaKnown RBP14.01□□□□□ -0.17
PTCH1-221ENST00000550914 DGLUCYQ7Z3D6 616 aa14.01□□□□□ -0.17
PTCH1-221ENST00000550914 MAP4K3Q8IVH8 894 aa14.01□□□□□ -0.17
PTCH1-221ENST00000550914 ZNF687Q8N1G0 1237 aa14.01□□□□□ -0.17
PTCH1-221ENST00000550914 E2F7Q96AV8 911 aa14.01□□□□□ -0.17
PTCH1-221ENST00000550914 ASAH2Q9NR71 780 aa14.01□□□□□ -0.17
PTCH1-221ENST00000550914 DLL3Q9NYJ7 618 aa14.01□□□□□ -0.17
PTCH1-221ENST00000550914 CEP72Q9P209 647 aa14.01□□□□□ -0.17
PTCH1-221ENST00000550914 LARSQ9P2J5 1176 aaKnown RBP14.01□□□□□ -0.17
PTCH1-221ENST00000550914 ANK1P16157 1881 aa14.01□□□□□ -0.17
PTCH1-221ENST00000550914 NUP210Q8TEM1 1887 aaPredicted RBP14□□□□□ -0.17
PTCH1-221ENST00000550914 OR6C75A6NL08 312 aa14□□□□□ -0.17
PTCH1-221ENST00000550914 XPOTO43592 962 aaKnown RBP14□□□□□ -0.17
PTCH1-221ENST00000550914 MOSPD3O75425 235 aa14□□□□□ -0.17
PTCH1-221ENST00000550914 PLA2G4BP0C869 781 aa14□□□□□ -0.17
PTCH1-221ENST00000550914 CXCL8P10145 99 aa14□□□□□ -0.17
PTCH1-221ENST00000550914 CPB1P15086 417 aa14□□□□□ -0.17
PTCH1-221ENST00000550914 SDHBP21912 280 aa14□□□□□ -0.17
PTCH1-221ENST00000550914 PAX3P23760 479 aa14□□□□□ -0.17
PTCH1-221ENST00000550914 NRLP54845 237 aa14□□□□□ -0.17
PTCH1-221ENST00000550914 NCKAP1LP55160 1127 aa14□□□□□ -0.17
PTCH1-221ENST00000550914 YWHAHQ04917 246 aaPredicted RBP14□□□□□ -0.17
PTCH1-221ENST00000550914 TWF1Q12792 350 aa14□□□□□ -0.17
PTCH1-221ENST00000550914 PLD1Q13393 1074 aa14□□□□□ -0.17
PTCH1-221ENST00000550914 VITQ6UXI7 678 aa14□□□□□ -0.17
PTCH1-221ENST00000550914 RNF19BQ6ZMZ0 732 aa14□□□□□ -0.17
PTCH1-221ENST00000550914 MFSD6LQ8IWD5 586 aa14□□□□□ -0.17
PTCH1-221ENST00000550914 DCLK2Q8N568 766 aa14□□□□□ -0.17
PTCH1-221ENST00000550914 SECISBP2LQ93073 1101 aaKnown RBP14□□□□□ -0.17
PTCH1-221ENST00000550914 MSANTD3Q96H12 275 aa14□□□□□ -0.17
PTCH1-221ENST00000550914 PNMA5Q96PV4 448 aa14□□□□□ -0.17
PTCH1-221ENST00000550914 CHRDQ9H2X0 955 aa14□□□□□ -0.17
PTCH1-221ENST00000550914 ZNF334Q9HCZ1 680 aaPredicted RBP14□□□□□ -0.17
PTCH1-221ENST00000550914 TUBGCP4Q9UGJ1 667 aa14□□□□□ -0.17
PTCH1-221ENST00000550914 ODF2LQ9ULJ1 636 aa14□□□□□ -0.17
PTCH1-221ENST00000550914 UBQLN1Q9UMX0 589 aaKnown RBP14□□□□□ -0.17
PTCH1-221ENST00000550914 ADRB2P07550 413 aa13.99□□□□□ -0.17
PTCH1-221ENST00000550914 PPP2R3AQ06190 1150 aa13.99□□□□□ -0.17
PTCH1-221ENST00000550914 RAD51AP2Q09MP3 1159 aa13.99□□□□□ -0.17
PTCH1-221ENST00000550914 MTAPQ13126 283 aa13.99□□□□□ -0.17
PTCH1-221ENST00000550914 GPR17Q13304 367 aa13.99□□□□□ -0.17
PTCH1-221ENST00000550914 GRM2Q14416 872 aa13.99□□□□□ -0.17
PTCH1-221ENST00000550914 PPP2R5DQ14738 602 aa13.99□□□□□ -0.17
PTCH1-221ENST00000550914 ZRSR1Q15695 479 aaKnown RBP13.99□□□□□ -0.17
PTCH1-221ENST00000550914 TMEM119Q4V9L6 283 aa13.99□□□□□ -0.17
PTCH1-221ENST00000550914 SEZ6Q53EL9 994 aa13.99□□□□□ -0.17
PTCH1-221ENST00000550914 C1orf228Q6PIY5 440 aa13.99□□□□□ -0.17
PTCH1-221ENST00000550914 HS6ST3Q8IZP7 471 aa13.99□□□□□ -0.17
PTCH1-221ENST00000550914 ZSCAN18Q8TBC5 510 aaPredicted RBP13.99□□□□□ -0.17
PTCH1-221ENST00000550914 KIF12Q96FN5 646 aa13.99□□□□□ -0.17
PTCH1-221ENST00000550914 CDK5RAP3Q96JB5 506 aa13.99□□□□□ -0.17
PTCH1-221ENST00000550914 ZSWIM3Q96MP5 696 aa13.99□□□□□ -0.17
PTCH1-221ENST00000550914 NCDNQ9UBB6 729 aa13.99□□□□□ -0.17
PTCH1-221ENST00000550914 SMG5Q9UPR3 1016 aaKnown RBP13.99□□□□□ -0.17
PTCH1-221ENST00000550914 YIPF1Q9Y548 306 aa13.99□□□□□ -0.17
PTCH1-221ENST00000550914 CACNA1BQ00975 2339 aa13.99□□□□□ -0.17
PTCH1-221ENST00000550914 SCN1AP35498 2009 aa13.98□□□□□ -0.17
PTCH1-221ENST00000550914 RALGAPA1Q6GYQ0 2036 aa13.98□□□□□ -0.17
PTCH1-221ENST00000550914 NRG2O14511 850 aaPredicted RBP13.98□□□□□ -0.17
PTCH1-221ENST00000550914 PIGRP01833 764 aa13.98□□□□□ -0.17
PTCH1-221ENST00000550914 MYL4P12829 197 aa13.98□□□□□ -0.17
PTCH1-221ENST00000550914 TDGF1P13385 188 aa13.98□□□□□ -0.17
PTCH1-221ENST00000550914 TYMPP19971 482 aa13.98□□□□□ -0.17
PTCH1-221ENST00000550914 GDI1P31150 447 aa13.98□□□□□ -0.17
PTCH1-221ENST00000550914 ABCD1P33897 745 aa13.98□□□□□ -0.17
PTCH1-221ENST00000550914 MATR3P43243 847 aaKnown RBP eCLIP13.98□□□□□ -0.17
PTCH1-221ENST00000550914 MYBPC2Q14324 1141 aa13.98□□□□□ -0.17
PTCH1-221ENST00000550914 ARSHQ5FYA8 562 aa13.98□□□□□ -0.17
PTCH1-221ENST00000550914 MCTP1Q6DN14 999 aa13.98□□□□□ -0.17
PTCH1-221ENST00000550914 HAUS6Q7Z4H7 955 aa13.98□□□□□ -0.17
PTCH1-221ENST00000550914 USP37Q86T82 979 aa13.98□□□□□ -0.17
PTCH1-221ENST00000550914 CD302Q8IX05 232 aa13.98□□□□□ -0.17
PTCH1-221ENST00000550914 SHKBP1Q8TBC3 707 aa13.98□□□□□ -0.17
PTCH1-221ENST00000550914 FAM3CQ92520 227 aa13.98□□□□□ -0.17
PTCH1-221ENST00000550914 BICD1Q96G01 975 aa13.98□□□□□ -0.17
PTCH1-221ENST00000550914 AK8Q96MA6 479 aa13.98□□□□□ -0.17
PTCH1-221ENST00000550914 LRRC3Q9BY71 257 aa13.98□□□□□ -0.17
PTCH1-221ENST00000550914 HAPLN2Q9GZV7 340 aa13.98□□□□□ -0.17
PTCH1-221ENST00000550914 HSFX1Q9UBD0 423 aa13.98□□□□□ -0.17
PTCH1-221ENST00000550914 ASB3Q9Y575 518 aa13.98□□□□□ -0.17
PTCH1-221ENST00000550914 PIAS3Q9Y6X2 628 aa13.98□□□□□ -0.17
PTCH1-221ENST00000550914 TCHHQ07283 1943 aa13.98□□□□□ -0.17
PTCH1-221ENST00000550914 DENND4CQ5VZ89 1909 aa13.98□□□□□ -0.17
PTCH1-221ENST00000550914 TSC2P49815 1807 aa13.97□□□□□ -0.17
PTCH1-221ENST00000550914 SPAG17Q6Q759 2223 aa13.97□□□□□ -0.17
PTCH1-221ENST00000550914 VWA3AA6NCI4 1184 aa13.97□□□□□ -0.17
PTCH1-221ENST00000550914 ARNTLO00327 626 aa13.97□□□□□ -0.17
PTCH1-221ENST00000550914 ZNF263O14978 683 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms