RNA–Protein interactions for RNA: ENST00000550889.5

ATXN2-222, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,703 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-222	ENST00000550889	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	5.2	□□□□□ -1.58
ATXN2-222	ENST00000550889	EFCAB14	O75071	495 aa		5.2	□□□□□ -1.58
ATXN2-222	ENST00000550889	CHRNA1	P02708	482 aa		5.2	□□□□□ -1.58
ATXN2-222	ENST00000550889	PGR	P06401	933 aa		5.2	□□□□□ -1.58
ATXN2-222	ENST00000550889	DDIT3	P35638	169 aa		5.2	□□□□□ -1.58
ATXN2-222	ENST00000550889	LONP1	P36776	959 aa	Known RBP	5.2	□□□□□ -1.58
ATXN2-222	ENST00000550889	EPHB4	P54760	987 aa		5.2	□□□□□ -1.58
ATXN2-222	ENST00000550889	CCL23	P55773	120 aa		5.2	□□□□□ -1.58
ATXN2-222	ENST00000550889	IGBP1	P78318	339 aa		5.2	□□□□□ -1.58
ATXN2-222	ENST00000550889	CYP4A11	Q02928	519 aa		5.2	□□□□□ -1.58
ATXN2-222	ENST00000550889	MGAT3	Q09327	533 aa		5.2	□□□□□ -1.58
ATXN2-222	ENST00000550889	CTTN	Q14247	550 aa	Known RBP	5.2	□□□□□ -1.58
ATXN2-222	ENST00000550889	SLC39A14	Q15043	492 aa		5.2	□□□□□ -1.58
ATXN2-222	ENST00000550889	HYI	Q5T013	277 aa		5.2	□□□□□ -1.58
ATXN2-222	ENST00000550889	KRT79	Q5XKE5	535 aa		5.2	□□□□□ -1.58
ATXN2-222	ENST00000550889	EFCAB12	Q6NXP0	572 aa		5.2	□□□□□ -1.58
ATXN2-222	ENST00000550889	RUFY4	Q6ZNE9	571 aa		5.2	□□□□□ -1.58
ATXN2-222	ENST00000550889	TDH	Q8IZJ6	230 aa		5.2	□□□□□ -1.58
ATXN2-222	ENST00000550889	LINC00301	Q8NCQ3	95 aa		5.2	□□□□□ -1.58
ATXN2-222	ENST00000550889	TRAPPC12	Q8WVT3	735 aa		5.2	□□□□□ -1.58
ATXN2-222	ENST00000550889	DNAJB3	Q8WWF6	145 aa		5.2	□□□□□ -1.58
ATXN2-222	ENST00000550889	GATAD2B	Q8WXI9	593 aa		5.2	□□□□□ -1.58
ATXN2-222	ENST00000550889	HERVK_113	Q902F9	699 aa		5.2	□□□□□ -1.58
ATXN2-222	ENST00000550889	ZNF396	Q96N95	335 aa	Predicted RBP	5.2	□□□□□ -1.58
ATXN2-222	ENST00000550889	USP28	Q96RU2	1077 aa		5.2	□□□□□ -1.58
ATXN2-222	ENST00000550889	ZC3H7B	Q9UGR2	993 aa	Known RBP	5.2	□□□□□ -1.58
ATXN2-222	ENST00000550889	CFAP45	Q9UL16	551 aa		5.2	□□□□□ -1.58
ATXN2-222	ENST00000550889	ATP6V1D	Q9Y5K8	247 aa		5.2	□□□□□ -1.58
ATXN2-222	ENST00000550889	SRPRB	Q9Y5M8	271 aa	Known RBP	5.2	□□□□□ -1.58
ATXN2-222	ENST00000550889	ABHD14A-ACY1	A0A1B0GW23	586 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	FAM221A	A4D161	298 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	VWA3A	A6NCI4	1184 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889		M0QZ92	97 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	NBN	O60934	754 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	PPP6R2	O75170	966 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	CILP	O75339	1184 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	MED24	O75448	989 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	BAIAP3	O94812	1187 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	LRIG2	O94898	1065 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	YEATS4	O95619	227 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	FGB	P02675	491 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	SPINK2	P20155	84 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	PTMS	P20962	102 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	RARRES1	P49788	294 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	DNM2	P50570	870 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	CRYBB1	P53674	252 aa	Predicted RBP	5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	NPEPPS	P55786	919 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	NUCB2	P80303	420 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	MRPS6	P82932	125 aa	Known RBP	5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	POU5F1B	Q06416	359 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	PKP1	Q13835	747 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	SLBP	Q14493	270 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	LRIT3	Q3SXY7	679 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	MTERF2	Q49AM1	385 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	PLEKHG4	Q58EX7	1191 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	TMEM240	Q5SV17	173 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	XP32	Q5T750	250 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	FAM173B	Q6P4H8	233 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	ZNF365	Q70YC5	407 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	TRMT1L	Q7Z2T5	733 aa	Known RBP	5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	DTX1	Q86Y01	620 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	METTL13	Q8N6R0	699 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	FBXO27	Q8NI29	283 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	KCNG4	Q8TDN1	519 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	APBB2	Q92870	758 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	SCLY	Q96I15	445 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	CEP170P1	Q96L14	293 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	MAP7D2	Q96T17	732 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	DPH2	Q9BQC3	489 aa	Predicted RBP	5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	5.19	□□□□□ -1.58	2e-8	■□□□□ 8.3
ATXN2-222	ENST00000550889	MMTAG2	Q9BU76	263 aa	Known RBP	5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	CELF4	Q9BZC1	486 aa	Known RBP	5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	FOXQ1	Q9C009	403 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	CCSER1	Q9C0I3	900 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	NT5C3A	Q9H0P0	336 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	MTIF3	Q9H2K0	278 aa	Known RBP	5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	PRDM16	Q9HAZ2	1276 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	DNM3	Q9UQ16	869 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	CORIN	Q9Y5Q5	1042 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	CLIC4	Q9Y696	253 aa		5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	LAMA2	P24043	3122 aa	Known RBP	5.19	□□□□□ -1.58
ATXN2-222	ENST00000550889	TMEM150B	A6NC51	233 aa		5.18	□□□□□ -1.58
ATXN2-222	ENST00000550889	ASAP2	O43150	1006 aa		5.18	□□□□□ -1.58
ATXN2-222	ENST00000550889	GPR32	O75388	356 aa		5.18	□□□□□ -1.58
ATXN2-222	ENST00000550889	ACTN1	P12814	892 aa		5.18	□□□□□ -1.58
ATXN2-222	ENST00000550889	EIF4A3	P38919	411 aa	Known RBP	5.18	□□□□□ -1.58
ATXN2-222	ENST00000550889	CCT6A	P40227	531 aa	Known RBP	5.18	□□□□□ -1.58
ATXN2-222	ENST00000550889	UBA7	P41226	1012 aa		5.18	□□□□□ -1.58
ATXN2-222	ENST00000550889	POLG	P54098	1239 aa	Predicted RBP	5.18	□□□□□ -1.58
ATXN2-222	ENST00000550889	MXD4	Q14582	209 aa	Predicted RBP	5.18	□□□□□ -1.58
ATXN2-222	ENST00000550889	PCBP1	Q15365	356 aa	Known RBP eCLIP	5.18	□□□□□ -1.58
ATXN2-222	ENST00000550889	SHH	Q15465	462 aa		5.18	□□□□□ -1.58
ATXN2-222	ENST00000550889	MSMP	Q1L6U9	139 aa		5.18	□□□□□ -1.58
ATXN2-222	ENST00000550889	XKR9	Q5GH70	373 aa		5.18	□□□□□ -1.58
ATXN2-222	ENST00000550889	FBXO47	Q5MNV8	452 aa		5.18	□□□□□ -1.58
ATXN2-222	ENST00000550889	ODR4	Q5SWX8	454 aa		5.18	□□□□□ -1.58
ATXN2-222	ENST00000550889	PRAMEF13	Q5VWM6	474 aa		5.18	□□□□□ -1.58
ATXN2-222	ENST00000550889	CNKSR3	Q6P9H4	555 aa		5.18	□□□□□ -1.58
ATXN2-222	ENST00000550889	FBXL19	Q6PCT2	694 aa		5.18	□□□□□ -1.58
ATXN2-222	ENST00000550889	TSHZ1	Q6ZSZ6	1077 aa		5.18	□□□□□ -1.58

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