RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 CXorf38Q8TB03 319 aa13.06□□□□□ -0.32
ERBB3-216ENST00000550869 FNBP1Q96RU3 617 aa13.06□□□□□ -0.32
ERBB3-216ENST00000550869 TRIM6Q9C030 488 aaPredicted RBP13.06□□□□□ -0.32
ERBB3-216ENST00000550869 CXCL16Q9H2A7 254 aa13.06□□□□□ -0.32
ERBB3-216ENST00000550869 ELAC1Q9H777 363 aaKnown RBP13.06□□□□□ -0.32
ERBB3-216ENST00000550869 TOPORSQ9NS56 1045 aaPredicted RBP13.06□□□□□ -0.32
ERBB3-216ENST00000550869 TMEM161AQ9NX61 479 aa13.06□□□□□ -0.32
ERBB3-216ENST00000550869 GIT1Q9Y2X7 761 aa13.06□□□□□ -0.32
ERBB3-216ENST00000550869 LINC01565O15544 149 aa13.05□□□□□ -0.32
ERBB3-216ENST00000550869 DLATP10515 647 aaKnown RBP13.05□□□□□ -0.32
ERBB3-216ENST00000550869 PON1P27169 355 aa13.05□□□□□ -0.32
ERBB3-216ENST00000550869 GTF2F1P35269 517 aaKnown RBP eCLIP13.05□□□□□ -0.323e-8■■■□□ 17.7
ERBB3-216ENST00000550869 GCLMP48507 274 aa13.05□□□□□ -0.32
ERBB3-216ENST00000550869 NRIP1P48552 1158 aa13.05□□□□□ -0.32
ERBB3-216ENST00000550869 TDRD10Q5VZ19 366 aaKnown RBP13.05□□□□□ -0.32
ERBB3-216ENST00000550869 OR5B17Q8NGF7 314 aa13.05□□□□□ -0.32
ERBB3-216ENST00000550869 ZMAT2Q96NC0 199 aaKnown RBP13.05□□□□□ -0.32
ERBB3-216ENST00000550869 TTYH3Q9C0H2 523 aa13.05□□□□□ -0.32
ERBB3-216ENST00000550869 PLCB1Q9NQ66 1216 aa13.05□□□□□ -0.32
ERBB3-216ENST00000550869 TLR9Q9NR96 1032 aa13.05□□□□□ -0.32
ERBB3-216ENST00000550869 CLEC1BQ9P126 229 aa13.05□□□□□ -0.32
ERBB3-216ENST00000550869 LZTS1Q9Y250 596 aa13.05□□□□□ -0.32
ERBB3-216ENST00000550869 ZNF318Q5VUA4 2279 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 SMIM28A0A1B0GU29 152 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 TBKBP1A7MCY6 615 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 MEIS3P2A8K0S8 358 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 FGF18O76093 207 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 NOL4O94818 638 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 CSPG5O95196 566 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 VNN1O95497 513 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 NFICP08651 508 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 SRGAP2BP0DMP2 458 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 ITGA4P13612 1032 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 LAG3P18627 525 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 TNNI1P19237 187 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 AKAP5P24588 427 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 GATMP50440 423 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 MXI1P50539 228 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 YARSP54577 528 aaKnown RBP13.04□□□□□ -0.32
ERBB3-216ENST00000550869 SYCP1Q15431 976 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 PTPN21Q16825 1174 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 EXOC3L4Q17RC7 722 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 DUOXA2Q1HG44 320 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 SPOUT1Q5T280 376 aaKnown RBP13.04□□□□□ -0.32
ERBB3-216ENST00000550869 SPECC1LQ69YQ0 1117 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 JADE1Q6IE81 842 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 GBP6Q6ZN66 633 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 ADGRD2Q7Z7M1 963 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 RNF135Q8IUD6 432 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 HACE1Q8IYU2 909 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 EHBP1Q8NDI1 1231 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 SEMA4DQ92854 862 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 PGBD4Q96DM1 585 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 TLE6Q9H808 572 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 SIX2Q9NPC8 291 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 UBN1Q9NPG3 1134 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 RNF19AQ9NV58 838 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 FBXL5Q9UKA1 691 aa13.04□□□□□ -0.32
ERBB3-216ENST00000550869 PTGESO14684 152 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 GLP2RO95838 553 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 SLC9A1P19634 815 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 CYP3A5P20815 502 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 PPM1AP35813 382 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 KLK7P49862 253 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 MYL7Q01449 175 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 CCDC173Q0VFZ6 552 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 CBX2Q14781 532 aaPredicted RBP13.03□□□□□ -0.32
ERBB3-216ENST00000550869 TMEM132DQ14C87 1099 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 NAB2Q15742 525 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 LMBRD2Q68DH5 695 aaPredicted RBP13.03□□□□□ -0.32
ERBB3-216ENST00000550869 SCARA3Q6AZY7 606 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 TRIM65Q6PJ69 517 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 TRAPPC11Q7Z392 1133 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 C1orf127Q8N9H9 656 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 FBXL13Q8NEE6 735 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 MICAL1Q8TDZ2 1067 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 TAS1R2Q8TE23 839 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 CACTINQ8WUQ7 758 aaKnown RBP13.03□□□□□ -0.32
ERBB3-216ENST00000550869 RSPH1Q8WYR4 309 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 ANP32BQ92688 251 aaKnown RBP13.03□□□□□ -0.32
ERBB3-216ENST00000550869 EDAQ92838 391 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 IQCDQ96DY2 449 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 FAM84AQ96KN4 292 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 PPP1R10Q96QC0 940 aaKnown RBP13.03□□□□□ -0.32
ERBB3-216ENST00000550869 CRACR2AQ9BSW2 395 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 NUP58Q9BVL2 599 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 EDEM3Q9BZQ6 932 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 RAB20Q9NX57 234 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 MIOSQ9NXC5 875 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 IMPACTQ9P2X3 320 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 PARP2Q9UGN5 583 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 PUF60Q9UHX1 559 aaKnown RBP13.03□□□□□ -0.32
ERBB3-216ENST00000550869 MUTYHQ9UIF7 546 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 SIX4Q9UIU6 781 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 DAAM1Q9Y4D1 1078 aa13.03□□□□□ -0.32
ERBB3-216ENST00000550869 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.03□□□□□ -0.32
ERBB3-216ENST00000550869 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.03□□□□□ -0.32
ERBB3-216ENST00000550869 LOC730098B7Z3J9 87 aa13.02□□□□□ -0.33
ERBB3-216ENST00000550869 PES1O00541 588 aaKnown RBP13.02□□□□□ -0.33
ERBB3-216ENST00000550869 EPHB6O15197 1021 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms