RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 ZNF568Q3ZCX4 644 aa7.52□□□□□ -1.21
CBX5-204ENST00000550411 XKR4Q5GH76 650 aa7.52□□□□□ -1.21
CBX5-204ENST00000550411 GLRA4Q5JXX5 417 aa7.52□□□□□ -1.21
CBX5-204ENST00000550411 AXDND1Q5T1B0 1012 aaPredicted RBP7.52□□□□□ -1.21
CBX5-204ENST00000550411 PHLDB3Q6NSJ2 640 aa7.52□□□□□ -1.21
CBX5-204ENST00000550411 LILRA6Q6PI73 481 aa7.52□□□□□ -1.21
CBX5-204ENST00000550411 CD300LGQ6UXG3 332 aa7.52□□□□□ -1.21
CBX5-204ENST00000550411 GET4Q7L5D6 327 aaPredicted RBP7.52□□□□□ -1.21
CBX5-204ENST00000550411 LINC00301Q8NCQ3 95 aa7.52□□□□□ -1.21
CBX5-204ENST00000550411 C3orf58Q8NDZ4 430 aa7.52□□□□□ -1.21
CBX5-204ENST00000550411 RIN2Q8WYP3 895 aaPredicted RBP7.52□□□□□ -1.21
CBX5-204ENST00000550411 LARP4BQ92615 738 aaKnown RBP7.52□□□□□ -1.21
CBX5-204ENST00000550411 DNAJC19Q96DA6 116 aa7.52□□□□□ -1.21
CBX5-204ENST00000550411 ZMAT2Q96NC0 199 aaKnown RBP7.52□□□□□ -1.21
CBX5-204ENST00000550411 PPP1R10Q96QC0 940 aaKnown RBP7.52□□□□□ -1.21
CBX5-204ENST00000550411 MRPL4Q9BYD3 311 aaKnown RBP7.52□□□□□ -1.21
CBX5-204ENST00000550411 FGFBP2Q9BYJ0 223 aa7.52□□□□□ -1.21
CBX5-204ENST00000550411 VRTNQ9H8Y1 702 aa7.52□□□□□ -1.21
CBX5-204ENST00000550411 C17orf75Q9HAS0 396 aa7.52□□□□□ -1.21
CBX5-204ENST00000550411 KMT5AQ9NQR1 393 aa7.52□□□□□ -1.21
CBX5-204ENST00000550411 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.52□□□□□ -1.21
CBX5-204ENST00000550411 KCND2Q9NZV8 630 aa7.52□□□□□ -1.21
CBX5-204ENST00000550411 PARP2Q9UGN5 583 aa7.52□□□□□ -1.21
CBX5-204ENST00000550411 ODF2LQ9ULJ1 636 aa7.52□□□□□ -1.21
CBX5-204ENST00000550411 GDAQ9Y2T3 454 aa7.52□□□□□ -1.21
CBX5-204ENST00000550411 SIT1Q9Y3P8 196 aa7.52□□□□□ -1.21
CBX5-204ENST00000550411 R4GN57 208 aa7.52□□□□□ -1.21
CBX5-204ENST00000550411 CASTOR2A6NHX0 329 aa7.51□□□□□ -1.21
CBX5-204ENST00000550411 MYMKA6NI61 221 aa7.51□□□□□ -1.21
CBX5-204ENST00000550411 TISP43B9A030 160 aa7.51□□□□□ -1.21
CBX5-204ENST00000550411 ANHXE9PGG2 379 aa7.51□□□□□ -1.21
CBX5-204ENST00000550411 K7ERI5 159 aa7.51□□□□□ -1.21
CBX5-204ENST00000550411 TADA2AO75478 443 aa7.51□□□□□ -1.21
CBX5-204ENST00000550411 PIGRP01833 764 aa7.51□□□□□ -1.21
CBX5-204ENST00000550411 DCNP07585 359 aaKnown RBP7.51□□□□□ -1.21
CBX5-204ENST00000550411 GRM5P41594 1212 aa7.51□□□□□ -1.21
CBX5-204ENST00000550411 TUSC3Q13454 348 aa7.51□□□□□ -1.21
CBX5-204ENST00000550411 HTR4Q13639 388 aa7.51□□□□□ -1.21
CBX5-204ENST00000550411 ZBTB41Q5SVQ8 909 aa7.51□□□□□ -1.21
CBX5-204ENST00000550411 DCLRE1AQ6PJP8 1040 aa7.51□□□□□ -1.21
CBX5-204ENST00000550411 ZC3H14Q6PJT7 736 aaKnown RBP7.51□□□□□ -1.21
CBX5-204ENST00000550411 SHC4Q6S5L8 630 aa7.51□□□□□ -1.21
CBX5-204ENST00000550411 PRSS55Q6UWB4 352 aaPredicted RBP7.51□□□□□ -1.21
CBX5-204ENST00000550411 MPZL3Q6UWV2 235 aa7.51□□□□□ -1.21
CBX5-204ENST00000550411 ALKAL1Q6UXT8 129 aa7.51□□□□□ -1.21
CBX5-204ENST00000550411 CALML4Q96GE6 196 aa7.51□□□□□ -1.21
CBX5-204ENST00000550411 STRA6Q9BX79 667 aa7.51□□□□□ -1.21
CBX5-204ENST00000550411 ZSCAN16Q9H4T2 348 aaPredicted RBP7.51□□□□□ -1.21
CBX5-204ENST00000550411 GOLGA2P5Q9HBQ8 144 aa7.51□□□□□ -1.21
CBX5-204ENST00000550411 ARHGEF3Q9NR81 526 aa7.51□□□□□ -1.21
CBX5-204ENST00000550411 SLC2A4RGQ9NR83 387 aa7.51□□□□□ -1.21
CBX5-204ENST00000550411 DLGAP2Q9P1A6 1054 aa7.51□□□□□ -1.21
CBX5-204ENST00000550411 STK17AQ9UEE5 414 aa7.51□□□□□ -1.21
CBX5-204ENST00000550411 RABGEF1Q9UJ41 708 aa7.51□□□□□ -1.21
CBX5-204ENST00000550411 ZMIZ1Q9ULJ6 1067 aa7.51□□□□□ -1.21
CBX5-204ENST00000550411 ZFP37Q9Y6Q3 630 aaPredicted RBP7.51□□□□□ -1.21
CBX5-204ENST00000550411 NUMBLQ9Y6R0 609 aa7.51□□□□□ -1.21
CBX5-204ENST00000550411 KMT2BQ9UMN6 2715 aaPredicted RBP7.51□□□□□ -1.21
CBX5-204ENST00000550411 SF3B1O75533 1304 aaKnown RBP eCLIP7.51□□□□□ -1.212e-6■■■■■ 155.1
CBX5-204ENST00000550411 FRMD3A2A2Y4 597 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 PCNX2A6NKB5 2137 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 K7ENM7 598 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 SPTLC2O15270 562 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 TOM1L1O75674 476 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 YEATS4O95619 227 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 HNRNPA1P09651 372 aaKnown RBP eCLIP7.5□□□□□ -1.21
CBX5-204ENST00000550411 SP9P0CG40 484 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 MCF2P10911 925 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 HARSP12081 509 aaKnown RBP7.5□□□□□ -1.21
CBX5-204ENST00000550411 FSHRP23945 695 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 NMT1P30419 496 aaKnown RBP7.5□□□□□ -1.21
CBX5-204ENST00000550411 CASP5P51878 434 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 STARD6P59095 220 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 OSTNP61366 133 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 MCL1Q07820 350 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 HSP90AA2PQ14568 343 aaPredicted RBP7.5□□□□□ -1.21
CBX5-204ENST00000550411 NOLC1Q14978 699 aaKnown RBP eCLIP7.5□□□□□ -1.21
CBX5-204ENST00000550411 STK38Q15208 465 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 PSMD5Q16401 504 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 FOXD4L6Q3SYB3 417 aaPredicted RBP7.5□□□□□ -1.21
CBX5-204ENST00000550411 SEZ6Q53EL9 994 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 RTP2Q5QGT7 225 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 PPM1LQ5SGD2 360 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 LIN9Q5TKA1 542 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 FOXD4L3Q6VB84 417 aaPredicted RBP7.5□□□□□ -1.21
CBX5-204ENST00000550411 ZPBP2Q6X784 338 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 HAUS6Q7Z4H7 955 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 GRASPQ7Z6J2 395 aaPredicted RBP7.5□□□□□ -1.21
CBX5-204ENST00000550411 RETREG3Q86VR2 466 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 SFR1Q86XK3 245 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 CEP57Q86XR8 500 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 MAP4K3Q8IVH8 894 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 C1orf210Q8IVY1 113 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 KIAA2013Q8IYS2 634 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 ST13P5Q8NFI4 369 aaPredicted RBP7.5□□□□□ -1.21
CBX5-204ENST00000550411 PJA1Q8NG27 643 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 HASPINQ8TF76 798 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 FGF14Q92915 247 aa7.5□□□□□ -1.21
CBX5-204ENST00000550411 C18orf25Q96B23 403 aaPredicted RBP7.5□□□□□ -1.21
CBX5-204ENST00000550411 SHDQ96IW2 340 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms