RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 HOXA6P31267 233 aa10.77□□□□□ -0.69
TRAFD1-207ENST00000550051 VIPR2P41587 438 aa10.77□□□□□ -0.69
TRAFD1-207ENST00000550051 TRAPPC10P48553 1259 aa10.77□□□□□ -0.69
TRAFD1-207ENST00000550051 OSTNP61366 133 aa10.77□□□□□ -0.69
TRAFD1-207ENST00000550051 SLC10A6Q3KNW5 377 aa10.77□□□□□ -0.69
TRAFD1-207ENST00000550051 ZNF568Q3ZCX4 644 aa10.77□□□□□ -0.69
TRAFD1-207ENST00000550051 MPZL3Q6UWV2 235 aa10.77□□□□□ -0.69
TRAFD1-207ENST00000550051 TAS1R3Q7RTX0 852 aa10.77□□□□□ -0.69
TRAFD1-207ENST00000550051 SPEM1Q8N4L4 309 aa10.77□□□□□ -0.69
TRAFD1-207ENST00000550051 IGSF22Q8N9C0 903 aa10.77□□□□□ -0.69
TRAFD1-207ENST00000550051 ZSCAN18Q8TBC5 510 aaPredicted RBP10.77□□□□□ -0.69
TRAFD1-207ENST00000550051 C18orf25Q96B23 403 aaPredicted RBP10.77□□□□□ -0.69
TRAFD1-207ENST00000550051 TBC1D32Q96NH3 1257 aa10.77□□□□□ -0.69
TRAFD1-207ENST00000550051 TCHPQ9BT92 498 aa10.77□□□□□ -0.69
TRAFD1-207ENST00000550051 LRRC3Q9BY71 257 aa10.77□□□□□ -0.69
TRAFD1-207ENST00000550051 DDX19AQ9NUU7 478 aaKnown RBP10.77□□□□□ -0.69
TRAFD1-207ENST00000550051 LRWD1Q9UFC0 647 aa10.77□□□□□ -0.69
TRAFD1-207ENST00000550051 USP18Q9UMW8 372 aa10.77□□□□□ -0.69
TRAFD1-207ENST00000550051 DNM3Q9UQ16 869 aa10.77□□□□□ -0.69
TRAFD1-207ENST00000550051 PIAS3Q9Y6X2 628 aa10.77□□□□□ -0.69
TRAFD1-207ENST00000550051 KMT2BQ9UMN6 2715 aaPredicted RBP10.77□□□□□ -0.69
TRAFD1-207ENST00000550051 CACNA1BQ00975 2339 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 HEPACAM2A8MVW5 462 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 M0QZQ0 153 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 SLC30A4O14863 429 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 CHADO15335 359 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 HRO43593 1189 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 FOXD2O60548 495 aaPredicted RBP10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 KRT37O76014 449 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 ADRB1P08588 477 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 CCNE1P24864 410 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 MARCKSP29966 332 aaPredicted RBP10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 NEK4P51957 841 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 FOSBP53539 338 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 GUCY1B3Q02153 619 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 FCHO2Q0JRZ9 810 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 SPEM2Q0P670 501 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 TWF1Q12792 350 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 PTGDRQ13258 359 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 DMP1Q13316 513 aaPredicted RBP10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 GAS6Q14393 721 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 ZBTB6Q15916 424 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 CSRP2Q16527 193 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 TTC38Q5R3I4 469 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 ZNF280DQ6N043 979 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 RNF19BQ6ZMZ0 732 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 C1orf186Q6ZWK4 172 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 FBXO18Q8NFZ0 1043 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 NETO1Q8TDF5 533 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 DRC1Q96MC2 740 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 LLPHQ9BRT6 129 aaKnown RBP10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 TIPINQ9BVW5 301 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 C8orf33Q9H7E9 229 aaPredicted RBP10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 PLEKHA5Q9HAU0 1116 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 KMT5AQ9NQR1 393 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 ASAH2Q9NR71 780 aa10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.76□□□□□ -0.69
TRAFD1-207ENST00000550051 TPRP12270 2363 aaKnown RBP10.75□□□□□ -0.69
TRAFD1-207ENST00000550051 K7ESF4 209 aa10.75□□□□□ -0.69
TRAFD1-207ENST00000550051 HIP1RO75146 1068 aa10.75□□□□□ -0.69
TRAFD1-207ENST00000550051 TOM1L1O75674 476 aa10.75□□□□□ -0.69
TRAFD1-207ENST00000550051 VNN2O95498 520 aa10.75□□□□□ -0.69
TRAFD1-207ENST00000550051 MYL4P12829 197 aa10.75□□□□□ -0.69
TRAFD1-207ENST00000550051 GJA1P17302 382 aa10.75□□□□□ -0.69
TRAFD1-207ENST00000550051 LRPAP1P30533 357 aa10.75□□□□□ -0.69
TRAFD1-207ENST00000550051 MCM4P33991 863 aa10.75□□□□□ -0.69
TRAFD1-207ENST00000550051 SATB1Q01826 763 aa10.75□□□□□ -0.69
TRAFD1-207ENST00000550051 YWHAHQ04917 246 aaPredicted RBP10.75□□□□□ -0.69
TRAFD1-207ENST00000550051 ST3GAL1Q11201 340 aa10.75□□□□□ -0.69
TRAFD1-207ENST00000550051 MAPK7Q13164 816 aa10.75□□□□□ -0.69
TRAFD1-207ENST00000550051 SIM2Q14190 667 aaPredicted RBP10.75□□□□□ -0.69
TRAFD1-207ENST00000550051 LRRC32Q14392 662 aa10.75□□□□□ -0.69
TRAFD1-207ENST00000550051 TEAD2Q15562 447 aa10.75□□□□□ -0.69
TRAFD1-207ENST00000550051 DGKKQ5KSL6 1271 aa10.75□□□□□ -0.69
TRAFD1-207ENST00000550051 RINT1Q6NUQ1 792 aa10.75□□□□□ -0.69
TRAFD1-207ENST00000550051 ZPBP2Q6X784 338 aa10.75□□□□□ -0.69
TRAFD1-207ENST00000550051 KCTD17Q8N5Z5 321 aa10.75□□□□□ -0.69
TRAFD1-207ENST00000550051 PDCD7Q8N8D1 485 aaKnown RBP10.75□□□□□ -0.69
TRAFD1-207ENST00000550051 SHKBP1Q8TBC3 707 aa10.75□□□□□ -0.69
TRAFD1-207ENST00000550051 CSGALNACT1Q8TDX6 532 aa10.75□□□□□ -0.69
TRAFD1-207ENST00000550051 SPIRE2Q8WWL2 714 aa10.75□□□□□ -0.69
TRAFD1-207ENST00000550051 C8orf76Q96K31 380 aa10.75□□□□□ -0.69
TRAFD1-207ENST00000550051 ZBTB45Q96K62 511 aaPredicted RBP10.75□□□□□ -0.69
TRAFD1-207ENST00000550051 TSPAN18Q96SJ8 248 aa10.75□□□□□ -0.69
TRAFD1-207ENST00000550051 RAB34Q9BZG1 259 aa10.75□□□□□ -0.69
TRAFD1-207ENST00000550051 ASB3Q9Y575 518 aa10.75□□□□□ -0.69
TRAFD1-207ENST00000550051 MYH11P35749 1972 aa10.74□□□□□ -0.69
TRAFD1-207ENST00000550051 TTC26A0AVF1 554 aa10.74□□□□□ -0.69
TRAFD1-207ENST00000550051 MYBPHLA2RUH7 354 aa10.74□□□□□ -0.69
TRAFD1-207ENST00000550051 E9PMD0 336 aa10.74□□□□□ -0.69
TRAFD1-207ENST00000550051 LAD1O00515 517 aa10.74□□□□□ -0.69
TRAFD1-207ENST00000550051 CYP3A5P20815 502 aa10.74□□□□□ -0.69
TRAFD1-207ENST00000550051 GUCY2CP25092 1073 aa10.74□□□□□ -0.69
TRAFD1-207ENST00000550051 WEE1P30291 646 aa10.74□□□□□ -0.69
TRAFD1-207ENST00000550051 AARSP49588 968 aaKnown RBP eCLIP10.74□□□□□ -0.69
TRAFD1-207ENST00000550051 EPHB3P54753 998 aa10.74□□□□□ -0.69
TRAFD1-207ENST00000550051 MCL1Q07820 350 aa10.74□□□□□ -0.69
TRAFD1-207ENST00000550051 DUSP4Q13115 394 aa10.74□□□□□ -0.69
TRAFD1-207ENST00000550051 GPR17Q13304 367 aa10.74□□□□□ -0.69
TRAFD1-207ENST00000550051 PLD1Q13393 1074 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms