RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 GCNT3O95395 438 aa17.72■□□□□ 0.43
VPS29-207ENST00000549970 AOC1P19801 751 aa17.72■□□□□ 0.43
VPS29-207ENST00000549970 RFX1P22670 979 aa17.72■□□□□ 0.43
VPS29-207ENST00000549970 AARSP49588 968 aaKnown RBP eCLIP17.72■□□□□ 0.43
VPS29-207ENST00000549970 KCNA1Q09470 495 aa17.72■□□□□ 0.43
VPS29-207ENST00000549970 SLC5A9Q2M3M2 681 aa17.72■□□□□ 0.43
VPS29-207ENST00000549970 MTSS1LQ765P7 747 aa17.72■□□□□ 0.43
VPS29-207ENST00000549970 USP37Q86T82 979 aa17.72■□□□□ 0.43
VPS29-207ENST00000549970 HSCBQ8IWL3 235 aa17.72■□□□□ 0.43
VPS29-207ENST00000549970 LINC00301Q8NCQ3 95 aa17.72■□□□□ 0.43
VPS29-207ENST00000549970 ATOH1Q92858 354 aaPredicted RBP17.72■□□□□ 0.43
VPS29-207ENST00000549970 CORO1BQ9BR76 489 aa17.72■□□□□ 0.43
VPS29-207ENST00000549970 TFIP11Q9UBB9 837 aaKnown RBP17.72■□□□□ 0.43
VPS29-207ENST00000549970 AFF4Q9UHB7 1163 aaKnown RBP17.72■□□□□ 0.43
VPS29-207ENST00000549970 STYXL1Q9Y6J8 313 aa17.72■□□□□ 0.43
VPS29-207ENST00000549970 TULP1O00294 542 aaPredicted RBP17.71■□□□□ 0.43
VPS29-207ENST00000549970 SPTLC2O15270 562 aa17.71■□□□□ 0.43
VPS29-207ENST00000549970 OAZ2O95190 189 aa17.71■□□□□ 0.43
VPS29-207ENST00000549970 HSP90AA1P07900 732 aaKnown RBP17.71■□□□□ 0.43
VPS29-207ENST00000549970 OR4Q2P0C623 313 aa17.71■□□□□ 0.43
VPS29-207ENST00000549970 PTPN2P17706 415 aa17.71■□□□□ 0.43
VPS29-207ENST00000549970 LILRA4P59901 499 aa17.71■□□□□ 0.43
VPS29-207ENST00000549970 C9orf57Q5W0N0 161 aa17.71■□□□□ 0.43
VPS29-207ENST00000549970 RNF19BQ6ZMZ0 732 aa17.71■□□□□ 0.43
VPS29-207ENST00000549970 MCRS1Q96EZ8 462 aa17.71■□□□□ 0.43
VPS29-207ENST00000549970 ZNF396Q96N95 335 aaPredicted RBP17.71■□□□□ 0.43
VPS29-207ENST00000549970 PGLYRP2Q96PD5 576 aa17.71■□□□□ 0.43
VPS29-207ENST00000549970 KXD1Q9BQD3 176 aa17.71■□□□□ 0.43
VPS29-207ENST00000549970 STRA6Q9BX79 667 aa17.71■□□□□ 0.43
VPS29-207ENST00000549970 ASB7Q9H672 318 aa17.71■□□□□ 0.43
VPS29-207ENST00000549970 EXOC7Q9UPT5 735 aa17.71■□□□□ 0.43
VPS29-207ENST00000549970 DERAQ9Y315 318 aa17.71■□□□□ 0.43
VPS29-207ENST00000549970 MYO15AQ9UKN7 3530 aa17.71■□□□□ 0.43
VPS29-207ENST00000549970 USP34Q70CQ2 3546 aa17.71■□□□□ 0.42
VPS29-207ENST00000549970 CEBPBP17676 345 aa17.7■□□□□ 0.42
VPS29-207ENST00000549970 ADSSP30520 456 aa17.7■□□□□ 0.42
VPS29-207ENST00000549970 CASP5P51878 434 aa17.7■□□□□ 0.42
VPS29-207ENST00000549970 GPC5P78333 572 aa17.7■□□□□ 0.42
VPS29-207ENST00000549970 TWF1Q12792 350 aa17.7■□□□□ 0.42
VPS29-207ENST00000549970 POSTNQ15063 836 aa17.7■□□□□ 0.42
VPS29-207ENST00000549970 FOXD4L6Q3SYB3 417 aaPredicted RBP17.7■□□□□ 0.42
VPS29-207ENST00000549970 L1TD1Q5T7N2 865 aaKnown RBP17.7■□□□□ 0.42
VPS29-207ENST00000549970 OVOS1Q6IE37 1185 aa17.7■□□□□ 0.42
VPS29-207ENST00000549970 FOXD4L3Q6VB84 417 aaPredicted RBP17.7■□□□□ 0.42
VPS29-207ENST00000549970 ELMOD1Q8N336 334 aa17.7■□□□□ 0.42
VPS29-207ENST00000549970 SENP8Q96LD8 212 aa17.7■□□□□ 0.42
VPS29-207ENST00000549970 ACCSQ96QU6 501 aa17.7■□□□□ 0.42
VPS29-207ENST00000549970 RTP3Q9BQQ7 232 aa17.7■□□□□ 0.42
VPS29-207ENST00000549970 FGFBP2Q9BYJ0 223 aa17.7■□□□□ 0.42
VPS29-207ENST00000549970 IRF2BPLQ9H1B7 796 aa17.7■□□□□ 0.42
VPS29-207ENST00000549970 TBC1D17Q9HA65 648 aa17.7■□□□□ 0.42
VPS29-207ENST00000549970 ARHGEF3Q9NR81 526 aa17.7■□□□□ 0.42
VPS29-207ENST00000549970 SLC2A4RGQ9NR83 387 aa17.7■□□□□ 0.42
VPS29-207ENST00000549970 PANK4Q9NVE7 773 aa17.7■□□□□ 0.42
VPS29-207ENST00000549970 C2CD2Q9Y426 696 aa17.7■□□□□ 0.42
VPS29-207ENST00000549970 SCN1AP35498 2009 aa17.69■□□□□ 0.42
VPS29-207ENST00000549970 SPTLC1O15269 473 aa17.69■□□□□ 0.42
VPS29-207ENST00000549970 PPP6R2O75170 966 aa17.69■□□□□ 0.42
VPS29-207ENST00000549970 ODC1P11926 461 aa17.69■□□□□ 0.42
VPS29-207ENST00000549970 TYMPP19971 482 aa17.69■□□□□ 0.42
VPS29-207ENST00000549970 IQCEQ6IPM2 695 aa17.69■□□□□ 0.42
VPS29-207ENST00000549970 CRELD2Q6UXH1 353 aaPredicted RBP17.69■□□□□ 0.42
VPS29-207ENST00000549970 PDZD4Q76G19 769 aaPredicted RBP17.69■□□□□ 0.42
VPS29-207ENST00000549970 SYCP3Q8IZU3 236 aa17.69■□□□□ 0.42
VPS29-207ENST00000549970 TCEAL4Q96EI5 215 aa17.69■□□□□ 0.42
VPS29-207ENST00000549970 OXCT2Q9BYC2 517 aaPredicted RBP17.69■□□□□ 0.42
VPS29-207ENST00000549970 AVENQ9NQS1 362 aaPredicted RBP17.69■□□□□ 0.42
VPS29-207ENST00000549970 OLFML3Q9NRN5 406 aa17.69■□□□□ 0.42
VPS29-207ENST00000549970 PCDHB13Q9Y5F0 798 aa17.69■□□□□ 0.42
VPS29-207ENST00000549970 ANO9A1A5B4 782 aa17.68■□□□□ 0.42
VPS29-207ENST00000549970 FRMD3A2A2Y4 597 aa17.68■□□□□ 0.42
VPS29-207ENST00000549970 OR6C75A6NL08 312 aa17.68■□□□□ 0.42
VPS29-207ENST00000549970 PIRO00625 290 aa17.68■□□□□ 0.42
VPS29-207ENST00000549970 PRSS36Q5K4E3 855 aa17.68■□□□□ 0.42
VPS29-207ENST00000549970 POTEHQ6S545 545 aa17.68■□□□□ 0.42
VPS29-207ENST00000549970 EFCAB13Q8IY85 973 aa17.68■□□□□ 0.42
VPS29-207ENST00000549970 HS6ST3Q8IZP7 471 aa17.68■□□□□ 0.42
VPS29-207ENST00000549970 ZSWIM2Q8NEG5 633 aa17.68■□□□□ 0.42
VPS29-207ENST00000549970 SAAL1Q96ER3 474 aa17.68■□□□□ 0.42
VPS29-207ENST00000549970 ZNF512Q96ME7 567 aaPredicted RBP17.68■□□□□ 0.42
VPS29-207ENST00000549970 FAM213AQ9BRX8 229 aa17.68■□□□□ 0.42
VPS29-207ENST00000549970 DPP3Q9NY33 737 aa17.68■□□□□ 0.42
VPS29-207ENST00000549970 GDE1Q9NZC3 331 aa17.68■□□□□ 0.42
VPS29-207ENST00000549970 CEP72Q9P209 647 aa17.68■□□□□ 0.42
VPS29-207ENST00000549970 MAFFQ9ULX9 164 aa17.68■□□□□ 0.42
VPS29-207ENST00000549970 YIPF1Q9Y548 306 aa17.68■□□□□ 0.42
VPS29-207ENST00000549970 TSC2P49815 1807 aa17.68■□□□□ 0.42
VPS29-207ENST00000549970 VPS13AQ96RL7 3174 aa17.67■□□□□ 0.42
VPS29-207ENST00000549970 DMDP11532 3685 aa17.67■□□□□ 0.42
VPS29-207ENST00000549970 NRG2O14511 850 aaPredicted RBP17.67■□□□□ 0.42
VPS29-207ENST00000549970 ZNF197O14709 1029 aa17.67■□□□□ 0.42
VPS29-207ENST00000549970 PRPF6O94906 941 aaKnown RBP17.67■□□□□ 0.42
VPS29-207ENST00000549970 IL18RAPO95256 599 aa17.67■□□□□ 0.42
VPS29-207ENST00000549970 VNN2O95498 520 aa17.67■□□□□ 0.42
VPS29-207ENST00000549970 YEATS4O95619 227 aa17.67■□□□□ 0.42
VPS29-207ENST00000549970 CCR2P41597 374 aa17.67■□□□□ 0.42
VPS29-207ENST00000549970 DUSP4Q13115 394 aa17.67■□□□□ 0.42
VPS29-207ENST00000549970 ALCAMQ13740 583 aa17.67■□□□□ 0.42
VPS29-207ENST00000549970 CYP4A22Q5TCH4 519 aa17.67■□□□□ 0.42
VPS29-207ENST00000549970 CCDC65Q8IXS2 484 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms