RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 TMEM191CA6NGB0 347 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 H3BRB1 525 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 SORBS3O60504 671 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 SHOX2O60902 331 aaPredicted RBP10.64□□□□□ -0.71
RAB5B-206ENST00000549505 PPFIA2O75334 1257 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 FGGP02679 453 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 TMEM191BP0C7N4 346 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 GNA15P30679 374 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 CARSP49589 748 aaKnown RBP10.64□□□□□ -0.71
RAB5B-206ENST00000549505 EAPPQ56P03 285 aaPredicted RBP10.64□□□□□ -0.71
RAB5B-206ENST00000549505 EEPD1Q7L9B9 569 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 ZDHHC14Q8IZN3 488 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 LRRC71Q8N4P6 559 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 KRT35Q92764 455 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 IMPG2Q9BZV3 1241 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 GOLPH3Q9H4A6 298 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 TUT1Q9H6E5 874 aaKnown RBP10.64□□□□□ -0.71
RAB5B-206ENST00000549505 EPB41L5Q9HCM4 733 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 PARVAQ9NVD7 372 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 ANKFY1Q9P2R3 1169 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 IVNS1ABPQ9Y6Y0 642 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 GOLGA6L10A0A0M3HER8 536 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 SRRM3A6NNA2 597 aaPredicted RBP10.64□□□□□ -0.71
RAB5B-206ENST00000549505 TNNC2P02585 160 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 POTEJP0CG39 1038 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 ADCYAP1R1P41586 468 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 COPS2P61201 443 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 GRIK4Q16099 956 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 APBB1IPQ7Z5R6 666 aaPredicted RBP10.64□□□□□ -0.71
RAB5B-206ENST00000549505 PSMB7Q99436 277 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 RPF1Q9H9Y2 349 aaKnown RBP10.64□□□□□ -0.71
RAB5B-206ENST00000549505 HOMER3Q9NSC5 361 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 PCDHB4Q9Y5E5 795 aa10.64□□□□□ -0.71
RAB5B-206ENST00000549505 ERICH4A6NGS2 130 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 A6NNZ2 444 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 TMCO5BA8MYB1 307 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 SRGAP2CP0DJJ0 459 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 ITGA4P13612 1032 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 NSFP46459 744 aaKnown RBP10.63□□□□□ -0.71
RAB5B-206ENST00000549505 RPL34P49207 117 aaKnown RBP10.63□□□□□ -0.71
RAB5B-206ENST00000549505 CLCN3P51790 818 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 MYL6P60660 151 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 ACAP1Q15027 740 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 TUBB8Q3ZCM7 444 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 MAP1SQ66K74 1059 aaPredicted RBP10.63□□□□□ -0.71
RAB5B-206ENST00000549505 SPOPLQ6IQ16 392 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 WDTC1Q8N5D0 677 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 C1orf127Q8N9H9 656 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 KAT2BQ92831 832 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 CYFIP2Q96F07 1278 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 HHIPL1Q96JK4 782 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 ERP44Q9BS26 406 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 TMEM109Q9BVC6 243 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 PLVAPQ9BX97 442 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 MTMR12Q9C0I1 747 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 ACP6Q9NPH0 428 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 CISHQ9NSE2 258 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.63□□□□□ -0.71
RAB5B-206ENST00000549505 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.63□□□□□ -0.71
RAB5B-206ENST00000549505 B4GALT5O43286 388 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 STAG3L1P0CL83 205 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 PYGMP11217 842 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 KRT5P13647 590 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 MARK3P27448 753 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 GUCY2DQ02846 1103 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 BIRC3Q13489 604 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 SLC10A6Q3KNW5 377 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 TAF3Q5VWG9 929 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 POLNQ7Z5Q5 900 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 RPAINQ86UA6 219 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 NME8Q8N427 588 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 TSEN2Q8NCE0 465 aaKnown RBP10.63□□□□□ -0.71
RAB5B-206ENST00000549505 EXD1Q8NHP7 514 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 IP6K2Q9UHH9 426 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 GJD2Q9UKL4 321 aa10.63□□□□□ -0.71
RAB5B-206ENST00000549505 ADCY6O43306 1168 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 MED7O43513 233 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 OPA1O60313 960 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 CILPO75339 1184 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 ARF4P18085 180 aaPredicted RBP10.62□□□□□ -0.71
RAB5B-206ENST00000549505 RRM1P23921 792 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 SKOR1P84550 965 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 SLC7A5Q01650 507 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 ILDR2Q71H61 639 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 RELL1Q8IUW5 271 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 FEZF2Q8TBJ5 459 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 TRAPPC12Q8WVT3 735 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 UPF3AQ9H1J1 476 aaKnown RBP10.62□□□□□ -0.71
RAB5B-206ENST00000549505 WDR35Q9P2L0 1181 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 PASKQ96RG2 1323 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 LACTBL1A8MY62 500 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 KPNA6O60684 536 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 MTMR3Q13615 1198 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 SEL1L2Q5TEA6 688 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 TMEM270Q6UE05 265 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 VSIG1Q86XK7 387 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 C3orf20Q8ND61 904 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 SOCS4Q8WXH5 440 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 LRRC45Q96CN5 670 aa10.62□□□□□ -0.71
RAB5B-206ENST00000549505 FRMD8P1Q9BZ68 369 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms