RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 HUS1O60921 280 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 GALTP07902 379 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 CCDC172P0C7W6 258 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 MFAP3P55082 362 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 NOP14P78316 857 aaKnown RBP10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 NR1I3Q14994 352 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 CBWD6Q4V339 395 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 CBWD3Q5JTY5 395 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 CBWD5Q5RIA9 395 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 C1orf220Q5T0J3 134 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 LMBRD2Q68DH5 695 aaPredicted RBP10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 PDE12Q6L8Q7 609 aaKnown RBP10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 FAM117BQ6P1L5 589 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 DSTYKQ6XUX3 929 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 GAS2L3Q86XJ1 694 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 TOP6BLQ8N6T0 577 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 COLGALT1Q8NBJ5 622 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 EHBP1Q8NDI1 1231 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 ZNF397Q8NF99 534 aaPredicted RBP10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 ZNF516Q92618 1163 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 C18orf25Q96B23 403 aaPredicted RBP10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 MRFAP1L1Q96HT8 127 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 TGS1Q96RS0 853 aaKnown RBP10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 POP1Q99575 1024 aaKnown RBP10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 C11orf84Q9BUA3 381 aaPredicted RBP10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 NIF3L1Q9GZT8 377 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 INTS2Q9H0H0 1204 aaKnown RBP10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 CWH43Q9H720 699 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 GRPEL1Q9HAV7 217 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 MIOSQ9NXC5 875 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 IFNKQ9P0W0 207 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 APEX2Q9UBZ4 518 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 FBXL5Q9UKA1 691 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 ADAM28Q9UKQ2 775 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 MYO6Q9UM54 1294 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 PLAGL2Q9UPG8 496 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 LZTS1Q9Y250 596 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 SCN1AP35498 2009 aa10.49□□□□□ -0.73
SMARCD1-206ENST00000549274 FSD2A1L4K1 749 aa10.48□□□□□ -0.73
SMARCD1-206ENST00000549274 KPNA7A9QM74 516 aa10.48□□□□□ -0.73
SMARCD1-206ENST00000549274 C5orf67F2Z3F1 127 aa10.48□□□□□ -0.73
SMARCD1-206ENST00000549274 MEFVO15553 781 aaPredicted RBP10.48□□□□□ -0.73
SMARCD1-206ENST00000549274 DDHD2O94830 711 aa10.48□□□□□ -0.73
SMARCD1-206ENST00000549274 TYMPP19971 482 aa10.48□□□□□ -0.73
SMARCD1-206ENST00000549274 CDC25BP30305 580 aa10.48□□□□□ -0.73
SMARCD1-206ENST00000549274 LHX1P48742 406 aa10.48□□□□□ -0.73
SMARCD1-206ENST00000549274 AARSP49588 968 aaKnown RBP eCLIP10.48□□□□□ -0.73
SMARCD1-206ENST00000549274 CLCNKBP51801 687 aa10.48□□□□□ -0.73
SMARCD1-206ENST00000549274 LILRA4P59901 499 aa10.48□□□□□ -0.73
SMARCD1-206ENST00000549274 PLCB3Q01970 1234 aa10.48□□□□□ -0.73
SMARCD1-206ENST00000549274 GCNT1Q02742 428 aa10.48□□□□□ -0.73
SMARCD1-206ENST00000549274 LRIT3Q3SXY7 679 aa10.48□□□□□ -0.73
SMARCD1-206ENST00000549274 FIGNQ5HY92 759 aa10.48□□□□□ -0.73
SMARCD1-206ENST00000549274 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.48□□□□□ -0.73
SMARCD1-206ENST00000549274 APTXQ7Z2E3 356 aaKnown RBP10.48□□□□□ -0.73
SMARCD1-206ENST00000549274 TAS1R2Q8TE23 839 aa10.48□□□□□ -0.73
SMARCD1-206ENST00000549274 SUSD3Q96L08 255 aa10.48□□□□□ -0.73
SMARCD1-206ENST00000549274 LMAN2LQ9H0V9 348 aa10.48□□□□□ -0.73
SMARCD1-206ENST00000549274 PRO3102Q9H379 93 aa10.48□□□□□ -0.73
SMARCD1-206ENST00000549274 SLC28A3Q9HAS3 691 aa10.48□□□□□ -0.73
SMARCD1-206ENST00000549274 SIX4Q9UIU6 781 aa10.48□□□□□ -0.73
SMARCD1-206ENST00000549274 PCDHB8Q9UN66 801 aa10.48□□□□□ -0.73
SMARCD1-206ENST00000549274 MRPL42Q9Y6G3 142 aaKnown RBP10.48□□□□□ -0.73
SMARCD1-206ENST00000549274 KIAA1671Q9BY89 1806 aa10.48□□□□□ -0.73
SMARCD1-206ENST00000549274 PTPRJQ12913 1337 aa10.48□□□□□ -0.73
SMARCD1-206ENST00000549274 H7C4K7 107 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 M0QZQ0 153 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 LPXNO60711 386 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 TACC1O75410 805 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 VNN1O95497 513 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 CYP11A1P05108 521 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 PON1P27169 355 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 PCSK1P29120 753 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 CTNNB1P35222 781 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 BMPR1AP36894 532 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 SLC11A1P49279 550 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 GATMP50440 423 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 WNT7BP56706 349 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 MYL6P60660 151 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 SOX4Q06945 474 aaPredicted RBP10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 SYCP1Q15431 976 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 TSR1Q2NL82 804 aaKnown RBP10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 USP41Q3LFD5 358 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 WDR72Q3MJ13 1102 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 SPECC1LQ69YQ0 1117 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 TRIM65Q6PJ69 517 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 ANKS3Q6ZW76 656 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 CACNA2D4Q7Z3S7 1137 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 PPFIBP1Q86W92 1011 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 UNC93AQ86WB7 457 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 ZNF280BQ86YH2 543 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 THEM5Q8N1Q8 247 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 SLC39A11Q8N1S5 342 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 PPM1KQ8N3J5 372 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 IGSF21Q96ID5 467 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 LSM14BQ9BX40 385 aaKnown RBP10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 XPO4Q9C0E2 1151 aaKnown RBP10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 XYLT2Q9H1B5 865 aa10.47□□□□□ -0.73
SMARCD1-206ENST00000549274 GOLGA2P5Q9HBQ8 144 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms