RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 MMRN2Q9H8L6 949 aa10.36□□□□□ -0.75
RAB5B-205ENST00000549034 DACH1Q9UI36 760 aa10.36□□□□□ -0.75
RAB5B-205ENST00000549034 RWDD2AQ9UIY3 292 aa10.36□□□□□ -0.75
RAB5B-205ENST00000549034 ITGA11Q9UKX5 1188 aa10.36□□□□□ -0.75
RAB5B-205ENST00000549034 TIMM13Q9Y5L4 95 aaPredicted RBP10.36□□□□□ -0.75
RAB5B-205ENST00000549034 PTPRJQ12913 1337 aa10.35□□□□□ -0.75
RAB5B-205ENST00000549034 ATG2AQ2TAZ0 1938 aa10.35□□□□□ -0.75
RAB5B-205ENST00000549034 KPNA7A9QM74 516 aa10.35□□□□□ -0.75
RAB5B-205ENST00000549034 CYB561D2O14569 222 aa10.35□□□□□ -0.75
RAB5B-205ENST00000549034 SPTLC1O15269 473 aa10.35□□□□□ -0.75
RAB5B-205ENST00000549034 NCK2O43639 380 aa10.35□□□□□ -0.75
RAB5B-205ENST00000549034 LILRB3O75022 631 aa10.35□□□□□ -0.75
RAB5B-205ENST00000549034 CLASP2O75122 1294 aaKnown RBP10.35□□□□□ -0.75
RAB5B-205ENST00000549034 FGFR1OPO95684 399 aaKnown RBP10.35□□□□□ -0.75
RAB5B-205ENST00000549034 C4BPAP04003 597 aaKnown RBP10.35□□□□□ -0.75
RAB5B-205ENST00000549034 CNPP09543 421 aaKnown RBP10.35□□□□□ -0.75
RAB5B-205ENST00000549034 RPL17P18621 184 aaKnown RBP10.35□□□□□ -0.75
RAB5B-205ENST00000549034 PAX3P23760 479 aa10.35□□□□□ -0.75
RAB5B-205ENST00000549034 PNPLA4P41247 253 aa10.35□□□□□ -0.75
RAB5B-205ENST00000549034 AP3M2P53677 418 aa10.35□□□□□ -0.75
RAB5B-205ENST00000549034 MYO1EQ12965 1108 aa10.35□□□□□ -0.75
RAB5B-205ENST00000549034 ADAM15Q13444 863 aa10.35□□□□□ -0.75
RAB5B-205ENST00000549034 BIRC3Q13489 604 aa10.35□□□□□ -0.75
RAB5B-205ENST00000549034 TPD52L1Q16890 204 aaPredicted RBP10.35□□□□□ -0.75
RAB5B-205ENST00000549034 TTI2Q6NXR4 508 aa10.35□□□□□ -0.75
RAB5B-205ENST00000549034 LLGL2Q6P1M3 1020 aa10.35□□□□□ -0.75
RAB5B-205ENST00000549034 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.35□□□□□ -0.75
RAB5B-205ENST00000549034 PALB2Q86YC2 1186 aa10.35□□□□□ -0.75
RAB5B-205ENST00000549034 APPL2Q8NEU8 664 aa10.35□□□□□ -0.75
RAB5B-205ENST00000549034 LNX1Q8TBB1 728 aaPredicted RBP10.35□□□□□ -0.75
RAB5B-205ENST00000549034 HPDLQ96IR7 371 aa10.35□□□□□ -0.75
RAB5B-205ENST00000549034 CDCA3Q99618 268 aaPredicted RBP10.35□□□□□ -0.75
RAB5B-205ENST00000549034 MKNK1Q9BUB5 465 aa10.35□□□□□ -0.75
RAB5B-205ENST00000549034 RXFP1Q9HBX9 757 aa10.35□□□□□ -0.75
RAB5B-205ENST00000549034 CLDND1Q9NY35 253 aa10.35□□□□□ -0.75
RAB5B-205ENST00000549034 TMEM63CQ9P1W3 806 aa10.35□□□□□ -0.75
RAB5B-205ENST00000549034 IRAK3Q9Y616 596 aa10.35□□□□□ -0.75
RAB5B-205ENST00000549034 H7C4K7 107 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 M0QZQ0 153 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 IKBKBO14920 756 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 SYN3O14994 580 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 TEX28O15482 410 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 LINC01565O15544 149 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 CLSTN1O94985 981 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 SPATA31D3P0C874 917 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 TIE1P35590 1138 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 GCLMP48507 274 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 ARPP19P56211 112 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 CLDN10P78369 228 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 PSMD5Q16401 504 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 DUSP6Q16828 381 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 SKOR2Q2VWA4 1001 aaPredicted RBP10.34□□□□□ -0.75
RAB5B-205ENST00000549034 DPCR1Q3MIW9 517 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 SV2CQ496J9 727 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 CCDC40Q4G0X9 1142 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 CTXN3Q4LDR2 81 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 VARS2Q5ST30 1063 aaKnown RBP10.34□□□□□ -0.75
RAB5B-205ENST00000549034 TCERG1LQ5VWI1 586 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 PDXDC1Q6P996 788 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 SPATA31D4Q6ZUB0 917 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 ANKS3Q6ZW76 656 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 PPFIBP1Q86W92 1011 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 METTL23Q86XA0 190 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 EFHBQ8N7U6 833 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 CXorf38Q8TB03 319 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 PIK3R5Q8WYR1 880 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 HLA-CQ95604 372 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 BORCS6Q96GS4 357 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 ZNF560Q96MR9 790 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 CEP63Q96MT8 703 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 GZF1Q9H116 711 aaPredicted RBP10.34□□□□□ -0.75
RAB5B-205ENST00000549034 PRDM6Q9NQX0 595 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.34□□□□□ -0.75
RAB5B-205ENST00000549034 FNIP2Q9P278 1114 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 SIX4Q9UIU6 781 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 VWA8A3KMH1 1905 aa10.34□□□□□ -0.75
RAB5B-205ENST00000549034 SZT2Q5T011 3432 aa10.33□□□□□ -0.76
RAB5B-205ENST00000549034 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.33□□□□□ -0.76
RAB5B-205ENST00000549034 ARHGEF37A1IGU5 675 aa10.33□□□□□ -0.76
RAB5B-205ENST00000549034 SLC16A3O15427 465 aaKnown RBP10.33□□□□□ -0.76
RAB5B-205ENST00000549034 STX10O60499 249 aa10.33□□□□□ -0.76
RAB5B-205ENST00000549034 HUS1O60921 280 aa10.33□□□□□ -0.76
RAB5B-205ENST00000549034 LETM1O95202 739 aaPredicted RBP10.33□□□□□ -0.76
RAB5B-205ENST00000549034 ADH1AP07327 375 aa10.33□□□□□ -0.76
RAB5B-205ENST00000549034 TRIM49P0CI25 452 aa10.33□□□□□ -0.76
RAB5B-205ENST00000549034 TRIM49CP0CI26 452 aa10.33□□□□□ -0.76
RAB5B-205ENST00000549034 ERCC5P28715 1186 aaPredicted RBP10.33□□□□□ -0.76
RAB5B-205ENST00000549034 OR1D2P34982 312 aa10.33□□□□□ -0.76
RAB5B-205ENST00000549034 AARSP49588 968 aaKnown RBP eCLIP10.33□□□□□ -0.76
RAB5B-205ENST00000549034 MYL6P60660 151 aa10.33□□□□□ -0.76
RAB5B-205ENST00000549034 RBM10P98175 930 aaKnown RBP10.33□□□□□ -0.76
RAB5B-205ENST00000549034 CREMQ03060 361 aa10.33□□□□□ -0.76
RAB5B-205ENST00000549034 YWHAHQ04917 246 aaPredicted RBP10.33□□□□□ -0.76
RAB5B-205ENST00000549034 PPP3CAQ08209 521 aa10.33□□□□□ -0.76
RAB5B-205ENST00000549034 PDAP1Q13442 181 aaKnown RBP10.33□□□□□ -0.76
RAB5B-205ENST00000549034 MRPL58Q14197 206 aaKnown RBP10.33□□□□□ -0.76
RAB5B-205ENST00000549034 KLHL40Q2TBA0 621 aa10.33□□□□□ -0.76
RAB5B-205ENST00000549034 DCAF17Q5H9S7 520 aaPredicted RBP10.33□□□□□ -0.76
RAB5B-205ENST00000549034 CT47A1Q5JQC4 288 aaPredicted RBP10.33□□□□□ -0.76
RAB5B-205ENST00000549034 C1orf220Q5T0J3 134 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms