RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 TBKBP1A7MCY6 615 aa30.88■■■□□ 2.53
BRF1-213ENST00000548421 ZBBXA8MT70 800 aa30.88■■■□□ 2.53
BRF1-213ENST00000548421 DGKIO75912 1065 aa30.88■■■□□ 2.53
BRF1-213ENST00000548421 TAF6P49848 677 aa30.88■■■□□ 2.53
BRF1-213ENST00000548421 DSC1Q08554 894 aa30.88■■■□□ 2.53
BRF1-213ENST00000548421 ARID5BQ14865 1188 aa30.88■■■□□ 2.53
BRF1-213ENST00000548421 DRAP1Q14919 205 aaPredicted RBP30.88■■■□□ 2.53
BRF1-213ENST00000548421 UPP1Q16831 310 aa30.88■■■□□ 2.53
BRF1-213ENST00000548421 ARHGAP44Q17R89 818 aa30.88■■■□□ 2.53
BRF1-213ENST00000548421 OR8K1Q8NGG5 319 aa30.88■■■□□ 2.53
BRF1-213ENST00000548421 FAM193BQ96PV7 902 aaPredicted RBP30.88■■■□□ 2.53
BRF1-213ENST00000548421 DNAJC7Q99615 494 aa30.88■■■□□ 2.53
BRF1-213ENST00000548421 NXF1Q9UBU9 619 aaKnown RBP30.88■■■□□ 2.53
BRF1-213ENST00000548421 F8VZ95 297 aa30.87■■■□□ 2.53
BRF1-213ENST00000548421 SV2CQ496J9 727 aa30.87■■■□□ 2.53
BRF1-213ENST00000548421 ZNF280BQ86YH2 543 aa30.87■■■□□ 2.53
BRF1-213ENST00000548421 JAKMIP2Q96AA8 810 aa30.87■■■□□ 2.53
BRF1-213ENST00000548421 PANX2Q96RD6 677 aa30.87■■■□□ 2.53
BRF1-213ENST00000548421 CACNG4Q9UBN1 327 aa30.87■■■□□ 2.53
BRF1-213ENST00000548421 DDHD2O94830 711 aa30.86■■■□□ 2.53
BRF1-213ENST00000548421 ASPAP45381 313 aa30.86■■■□□ 2.53
BRF1-213ENST00000548421 TNNC1P63316 161 aa30.86■■■□□ 2.53
BRF1-213ENST00000548421 COL4A6Q14031 1691 aa30.86■■■□□ 2.53
BRF1-213ENST00000548421 TSR1Q2NL82 804 aaKnown RBP30.86■■■□□ 2.53
BRF1-213ENST00000548421 LRRC43Q8N309 656 aa30.86■■■□□ 2.53
BRF1-213ENST00000548421 ARID3AQ99856 593 aa30.86■■■□□ 2.53
BRF1-213ENST00000548421 GPR88Q9GZN0 384 aa30.86■■■□□ 2.53
BRF1-213ENST00000548421 COLGALT2Q8IYK4 626 aa30.85■■■□□ 2.53
BRF1-213ENST00000548421 HERVK_113Q902F9 699 aa30.85■■■□□ 2.53
BRF1-213ENST00000548421 SYN2Q92777 582 aaPredicted RBP30.85■■■□□ 2.53
BRF1-213ENST00000548421 PAAF1Q9BRP4 392 aa30.85■■■□□ 2.53
BRF1-213ENST00000548421 POLIQ9UNA4 740 aa30.85■■■□□ 2.53
BRF1-213ENST00000548421 STAT1P42224 750 aa30.84■■■□□ 2.53
BRF1-213ENST00000548421 LILRA4P59901 499 aa30.84■■■□□ 2.53
BRF1-213ENST00000548421 SFMBT2Q5VUG0 894 aa30.84■■■□□ 2.53
BRF1-213ENST00000548421 SCARA5Q6ZMJ2 495 aa30.84■■■□□ 2.53
BRF1-213ENST00000548421 FMNL3Q8IVF7 1028 aa30.84■■■□□ 2.53
BRF1-213ENST00000548421 SHC3Q92529 594 aa30.84■■■□□ 2.53
BRF1-213ENST00000548421 BCO2Q9BYV7 579 aa30.84■■■□□ 2.53
BRF1-213ENST00000548421 KPNA7A9QM74 516 aa30.83■■■□□ 2.53
BRF1-213ENST00000548421 B4GALT3O60512 393 aa30.83■■■□□ 2.53
BRF1-213ENST00000548421 LRRC8AQ8IWT6 810 aa30.83■■■□□ 2.53
BRF1-213ENST00000548421 ZNF689Q96CS4 500 aaPredicted RBP30.83■■■□□ 2.53
BRF1-213ENST00000548421 NRDE2Q9H7Z3 1164 aa30.83■■■□□ 2.53
BRF1-213ENST00000548421 GDAP2Q9NXN4 497 aa30.83■■■□□ 2.53
BRF1-213ENST00000548421 SNX9Q9Y5X1 595 aa30.83■■■□□ 2.53
BRF1-213ENST00000548421 SPTLC1O15269 473 aa30.82■■■□□ 2.53
BRF1-213ENST00000548421 HNRNPH3P31942 346 aaKnown RBP30.82■■■□□ 2.53
BRF1-213ENST00000548421 SOX5P35711 763 aa30.82■■■□□ 2.53
BRF1-213ENST00000548421 PAN2Q504Q3 1202 aaKnown RBP30.82■■■□□ 2.53
BRF1-213ENST00000548421 FAM117BQ6P1L5 589 aa30.82■■■□□ 2.53
BRF1-213ENST00000548421 TMCO2Q7Z6W1 182 aaPredicted RBP30.82■■■□□ 2.53
BRF1-213ENST00000548421 C3orf58Q8NDZ4 430 aa30.82■■■□□ 2.53
BRF1-213ENST00000548421 MTIF3Q9H2K0 278 aaKnown RBP30.82■■■□□ 2.53
BRF1-213ENST00000548421 CYP3A43Q9HB55 503 aa30.82■■■□□ 2.53
BRF1-213ENST00000548421 RC3H2Q9HBD1 1191 aaKnown RBP30.82■■■□□ 2.53
BRF1-213ENST00000548421 ZNHIT6Q9NWK9 470 aaKnown RBP30.82■■■□□ 2.53
BRF1-213ENST00000548421 AIPL1Q9NZN9 384 aa30.82■■■□□ 2.53
BRF1-213ENST00000548421 CXXC1Q9P0U4 656 aaPredicted RBP30.82■■■□□ 2.53
BRF1-213ENST00000548421 FOXN3O00409 490 aaPredicted RBP30.82■■■□□ 2.52
BRF1-213ENST00000548421 PAX3P23760 479 aa30.82■■■□□ 2.52
BRF1-213ENST00000548421 YWHAEP62258 255 aaKnown RBP30.82■■■□□ 2.52
BRF1-213ENST00000548421 DCLRE1AQ6PJP8 1040 aa30.82■■■□□ 2.52
BRF1-213ENST00000548421 RABGGTAQ92696 567 aa30.82■■■□□ 2.52
BRF1-213ENST00000548421 MMS19Q96T76 1030 aa30.82■■■□□ 2.52
BRF1-213ENST00000548421 DNAJB4Q9UDY4 337 aa30.82■■■□□ 2.52
BRF1-213ENST00000548421 B3GAT3O94766 335 aa30.81■■■□□ 2.52
BRF1-213ENST00000548421 PNMA6AP0CW24 399 aaPredicted RBP30.81■■■□□ 2.52
BRF1-213ENST00000548421 OR1G1P47890 313 aa30.81■■■□□ 2.52
BRF1-213ENST00000548421 E4F1Q66K89 784 aaPredicted RBP30.81■■■□□ 2.52
BRF1-213ENST00000548421 SMYD5Q6GMV2 418 aa30.81■■■□□ 2.52
BRF1-213ENST00000548421 UBR7Q8N806 425 aa30.81■■■□□ 2.52
BRF1-213ENST00000548421 FAM124BQ9H5Z6 455 aaPredicted RBP30.81■■■□□ 2.52
BRF1-213ENST00000548421 SMYD3Q9H7B4 428 aa30.81■■■□□ 2.52
BRF1-213ENST00000548421 WEE2P0C1S8 567 aa30.8■■■□□ 2.52
BRF1-213ENST00000548421 FERP16591 822 aa30.8■■■□□ 2.52
BRF1-213ENST00000548421 ACO1P21399 889 aaKnown RBP30.8■■■□□ 2.52
BRF1-213ENST00000548421 ASIC2Q16515 512 aa30.8■■■□□ 2.52
BRF1-213ENST00000548421 MEA1Q16626 185 aa30.8■■■□□ 2.52
BRF1-213ENST00000548421 FAM71AQ8IYT1 594 aa30.8■■■□□ 2.52
BRF1-213ENST00000548421 SLC9A7Q96T83 725 aa30.8■■■□□ 2.52
BRF1-213ENST00000548421 TMEM175Q9BSA9 504 aa30.8■■■□□ 2.52
BRF1-213ENST00000548421 CISHQ9NSE2 258 aa30.8■■■□□ 2.52
BRF1-213ENST00000548421 SLC4A7Q9Y6M7 1214 aa30.8■■■□□ 2.52
BRF1-213ENST00000548421 TMEM189-UBE2V1I3L0A0 370 aa30.79■■■□□ 2.52
BRF1-213ENST00000548421 GFPT2O94808 682 aa30.79■■■□□ 2.52
BRF1-213ENST00000548421 RAP1GAPP47736 663 aa30.79■■■□□ 2.52
BRF1-213ENST00000548421 AARSP49588 968 aaKnown RBP eCLIP30.79■■■□□ 2.52
BRF1-213ENST00000548421 WDR59Q6PJI9 974 aa30.79■■■□□ 2.52
BRF1-213ENST00000548421 CMTR2Q8IYT2 770 aaKnown RBP30.79■■■□□ 2.52
BRF1-213ENST00000548421 CCDC112Q8NEF3 446 aa30.79■■■□□ 2.52
BRF1-213ENST00000548421 YME1L1Q96TA2 773 aa30.79■■■□□ 2.52
BRF1-213ENST00000548421 SDCBP2Q9H190 292 aa30.79■■■□□ 2.52
BRF1-213ENST00000548421 KIF4AO95239 1232 aa30.78■■■□□ 2.52
BRF1-213ENST00000548421 GJB5O95377 273 aa30.78■■■□□ 2.52
BRF1-213ENST00000548421 CCDC172P0C7W6 258 aa30.78■■■□□ 2.52
BRF1-213ENST00000548421 KRT5P13647 590 aa30.78■■■□□ 2.52
BRF1-213ENST00000548421 CD58P19256 250 aa30.78■■■□□ 2.52
BRF1-213ENST00000548421 FECHP22830 423 aa30.78■■■□□ 2.52
BRF1-213ENST00000548421 IGFBP6P24592 240 aaPredicted RBP30.78■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms