RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 FBXW11Q9UKB1 542 aa20.24■□□□□ 0.83
PRPF40B-206ENST00000547764 SCN1AP35498 2009 aa20.24■□□□□ 0.83
PRPF40B-206ENST00000547764 EXOC3O60645 756 aa20.23■□□□□ 0.83
PRPF40B-206ENST00000547764 KINO60870 393 aaKnown RBP20.23■□□□□ 0.83
PRPF40B-206ENST00000547764 ITGB3P05106 788 aa20.23■□□□□ 0.83
PRPF40B-206ENST00000547764 CYP24A1Q07973 514 aa20.23■□□□□ 0.83
PRPF40B-206ENST00000547764 CTXN3Q4LDR2 81 aa20.23■□□□□ 0.83
PRPF40B-206ENST00000547764 ATAT1Q5SQI0 421 aa20.23■□□□□ 0.83
PRPF40B-206ENST00000547764 SCARA3Q6AZY7 606 aa20.23■□□□□ 0.83
PRPF40B-206ENST00000547764 SLC8B1Q6J4K2 584 aa20.23■□□□□ 0.83
PRPF40B-206ENST00000547764 ELOA2Q8IYF1 753 aaPredicted RBP20.23■□□□□ 0.83
PRPF40B-206ENST00000547764 GJD3Q8N144 294 aa20.23■□□□□ 0.83
PRPF40B-206ENST00000547764 GUF1Q8N442 669 aaKnown RBP20.23■□□□□ 0.83
PRPF40B-206ENST00000547764 SPATA20Q8TB22 786 aa20.23■□□□□ 0.83
PRPF40B-206ENST00000547764 GSDMAQ96QA5 445 aa20.23■□□□□ 0.83
PRPF40B-206ENST00000547764 PHF7Q9BWX1 381 aaPredicted RBP20.23■□□□□ 0.83
PRPF40B-206ENST00000547764 MTMR12Q9C0I1 747 aa20.23■□□□□ 0.83
PRPF40B-206ENST00000547764 INTS13Q9NVM9 706 aa20.23■□□□□ 0.83
PRPF40B-206ENST00000547764 DMAC2Q9NW81 257 aa20.23■□□□□ 0.83
PRPF40B-206ENST00000547764 RMND1Q9NWS8 449 aa20.23■□□□□ 0.83
PRPF40B-206ENST00000547764 HOOK1Q9UJC3 728 aaKnown RBP20.23■□□□□ 0.83
PRPF40B-206ENST00000547764 FBXL5Q9UKA1 691 aa20.23■□□□□ 0.83
PRPF40B-206ENST00000547764 PCDHA5Q9Y5H7 936 aa20.23■□□□□ 0.83
PRPF40B-206ENST00000547764 PTPRJQ12913 1337 aa20.23■□□□□ 0.83
PRPF40B-206ENST00000547764 MTCL1Q9Y4B5 1905 aaKnown RBP20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 CCDC195A0A1B0GUA6 201 aa20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 C19orf67A6NJJ6 358 aa20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 TNFRSF10AO00220 468 aa20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 RFPL2O75678 378 aa20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 OAZ2O95190 189 aa20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 SMC2O95347 1197 aa20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 TMEM191BP0C7N4 346 aa20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 POLR2BP30876 1174 aaKnown RBP20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 MTHFRP42898 656 aa20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 TAF6P49848 677 aa20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 YWHAHQ04917 246 aaPredicted RBP20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 PSMD6Q15008 389 aa20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 ZNF280DQ6N043 979 aa20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 GPR149Q86SP6 731 aa20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 SLC9A9Q8IVB4 645 aa20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 SMYD4Q8IYR2 804 aaPredicted RBP20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 CSGALNACT2Q8N6G5 542 aa20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 CMASQ8NFW8 434 aaPredicted RBP20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 OR5B17Q8NGF7 314 aa20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 CXorf38Q8TB03 319 aa20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 TMEM174Q8WUU8 243 aa20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 SMARCE1Q969G3 411 aa20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 CCDC127Q96BQ5 260 aa20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 ANKRD36BP1Q96IX9 119 aa20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 MFSD14AQ96MC6 490 aa20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 RIPOR3Q96MK2 946 aa20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 NECTIN4Q96NY8 510 aa20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 ITGA11Q9UKX5 1188 aa20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 AGAP1Q9UPQ3 857 aa20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 TRAF3IP3Q9Y228 551 aa20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 MUC3AQ02505 3323 aa20.22■□□□□ 0.83
PRPF40B-206ENST00000547764 CALUO43852 315 aaPredicted RBP20.21■□□□□ 0.83
PRPF40B-206ENST00000547764 PRPF40AO75400 957 aaKnown RBP20.21■□□□□ 0.83
PRPF40B-206ENST00000547764 NR3C1P04150 777 aa20.21■□□□□ 0.83
PRPF40B-206ENST00000547764 DLATP10515 647 aaKnown RBP20.21■□□□□ 0.83
PRPF40B-206ENST00000547764 ODC1P11926 461 aa20.21■□□□□ 0.83
PRPF40B-206ENST00000547764 TYMPP19971 482 aa20.21■□□□□ 0.83
PRPF40B-206ENST00000547764 SSTR3P32745 418 aaPredicted RBP20.21■□□□□ 0.83
PRPF40B-206ENST00000547764 ARPP19P56211 112 aa20.21■□□□□ 0.83
PRPF40B-206ENST00000547764 UBE2HP62256 183 aa20.21■□□□□ 0.83
PRPF40B-206ENST00000547764 ROR1Q01973 937 aa20.21■□□□□ 0.83
PRPF40B-206ENST00000547764 DUOXA2Q1HG44 320 aa20.21■□□□□ 0.83
PRPF40B-206ENST00000547764 C15orf39Q6ZRI6 1047 aa20.21■□□□□ 0.83
PRPF40B-206ENST00000547764 USP37Q86T82 979 aa20.21■□□□□ 0.83
PRPF40B-206ENST00000547764 WDR49Q8IV35 697 aa20.21■□□□□ 0.83
PRPF40B-206ENST00000547764 BORCS6Q96GS4 357 aa20.21■□□□□ 0.83
PRPF40B-206ENST00000547764 ZNF560Q96MR9 790 aa20.21■□□□□ 0.83
PRPF40B-206ENST00000547764 IPO9Q96P70 1041 aaKnown RBP20.21■□□□□ 0.83
PRPF40B-206ENST00000547764 FNBP1Q96RU3 617 aa20.21■□□□□ 0.83
PRPF40B-206ENST00000547764 POP1Q99575 1024 aaKnown RBP20.21■□□□□ 0.83
PRPF40B-206ENST00000547764 POMKQ9H5K3 350 aa20.21■□□□□ 0.83
PRPF40B-206ENST00000547764 SIX4Q9UIU6 781 aa20.21■□□□□ 0.83
PRPF40B-206ENST00000547764 WDR27A2RRH5 827 aa20.2■□□□□ 0.82
PRPF40B-206ENST00000547764 KPNA7A9QM74 516 aa20.2■□□□□ 0.82
PRPF40B-206ENST00000547764 CYB561D2O14569 222 aa20.2■□□□□ 0.82
PRPF40B-206ENST00000547764 ZMYND10O75800 440 aa20.2■□□□□ 0.82
PRPF40B-206ENST00000547764 TNNC2P02585 160 aa20.2■□□□□ 0.82
PRPF40B-206ENST00000547764 KRT19P08727 400 aa20.2■□□□□ 0.82
PRPF40B-206ENST00000547764 PNPLA4P41247 253 aa20.2■□□□□ 0.82
PRPF40B-206ENST00000547764 RBP5P82980 135 aa20.2■□□□□ 0.82
PRPF40B-206ENST00000547764 MYBPC2Q14324 1141 aa20.2■□□□□ 0.82
PRPF40B-206ENST00000547764 SV2CQ496J9 727 aa20.2■□□□□ 0.82
PRPF40B-206ENST00000547764 ZNF658Q5TYW1 1059 aaPredicted RBP20.2■□□□□ 0.82
PRPF40B-206ENST00000547764 OVOS1Q6IE37 1185 aa20.2■□□□□ 0.82
PRPF40B-206ENST00000547764 ZNF461Q8TAF7 563 aa20.2■□□□□ 0.82
PRPF40B-206ENST00000547764 ZNF707Q96C28 371 aaPredicted RBP20.2■□□□□ 0.82
PRPF40B-206ENST00000547764 RPGRIP1Q96KN7 1286 aa20.2■□□□□ 0.82
PRPF40B-206ENST00000547764 CGRRF1Q99675 332 aa20.2■□□□□ 0.82
PRPF40B-206ENST00000547764 GZF1Q9H116 711 aaPredicted RBP20.2■□□□□ 0.82
PRPF40B-206ENST00000547764 ZDHHC7Q9NXF8 308 aa20.2■□□□□ 0.82
PRPF40B-206ENST00000547764 ARHGEF37A1IGU5 675 aa20.19■□□□□ 0.82
PRPF40B-206ENST00000547764 ABLIM3O94929 683 aa20.19■□□□□ 0.82
PRPF40B-206ENST00000547764 PAPLNO95428 1278 aa20.19■□□□□ 0.82
PRPF40B-206ENST00000547764 CYP11A1P05108 521 aa20.19■□□□□ 0.82
PRPF40B-206ENST00000547764 C8AP07357 584 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms