RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 PAX3P23760 479 aa25.11■■□□□ 1.61
SMARCD1-204ENST00000547637 EPHB3P54753 998 aa25.11■■□□□ 1.61
SMARCD1-204ENST00000547637 NRLP54845 237 aa25.11■■□□□ 1.61
SMARCD1-204ENST00000547637 SLC12A3P55017 1021 aa25.11■■□□□ 1.61
SMARCD1-204ENST00000547637 GRM2Q14416 872 aa25.11■■□□□ 1.61
SMARCD1-204ENST00000547637 DGLUCYQ7Z3D6 616 aa25.11■■□□□ 1.61
SMARCD1-204ENST00000547637 HAUS6Q7Z4H7 955 aa25.11■■□□□ 1.61
SMARCD1-204ENST00000547637 SUMF1Q8NBK3 374 aa25.11■■□□□ 1.61
SMARCD1-204ENST00000547637 PNMA5Q96PV4 448 aa25.11■■□□□ 1.61
SMARCD1-204ENST00000547637 RPF1Q9H9Y2 349 aaKnown RBP25.11■■□□□ 1.61
SMARCD1-204ENST00000547637 OR6C75A6NL08 312 aa25.1■■□□□ 1.61
SMARCD1-204ENST00000547637 ZNF263O14978 683 aa25.1■■□□□ 1.61
SMARCD1-204ENST00000547637 SDHBP21912 280 aa25.1■■□□□ 1.61
SMARCD1-204ENST00000547637 GDI1P31150 447 aa25.1■■□□□ 1.61
SMARCD1-204ENST00000547637 UBA7P41226 1012 aa25.1■■□□□ 1.61
SMARCD1-204ENST00000547637 ALDH1A3P47895 512 aa25.1■■□□□ 1.61
SMARCD1-204ENST00000547637 C1orf228Q6PIY5 440 aa25.1■■□□□ 1.61
SMARCD1-204ENST00000547637 RNF19BQ6ZMZ0 732 aa25.1■■□□□ 1.61
SMARCD1-204ENST00000547637 CD302Q8IX05 232 aa25.1■■□□□ 1.61
SMARCD1-204ENST00000547637 YAF2Q8IY57 180 aa25.1■■□□□ 1.61
SMARCD1-204ENST00000547637 RASSF8Q8NHQ8 419 aa25.1■■□□□ 1.61
SMARCD1-204ENST00000547637 CEP72Q9P209 647 aa25.1■■□□□ 1.61
SMARCD1-204ENST00000547637 TUBGCP4Q9UGJ1 667 aa25.1■■□□□ 1.61
SMARCD1-204ENST00000547637 DMDP11532 3685 aa25.09■■□□□ 1.61
SMARCD1-204ENST00000547637 TTC26A0AVF1 554 aa25.09■■□□□ 1.61
SMARCD1-204ENST00000547637 HNRNPDLO14979 420 aaKnown RBP25.09■■□□□ 1.61
SMARCD1-204ENST00000547637 NCKAP1LP55160 1127 aa25.09■■□□□ 1.61
SMARCD1-204ENST00000547637 ARMCX5Q6P1M9 558 aa25.09■■□□□ 1.61
SMARCD1-204ENST00000547637 MYCT1Q8N699 235 aa25.09■■□□□ 1.61
SMARCD1-204ENST00000547637 ZSCAN18Q8TBC5 510 aaPredicted RBP25.09■■□□□ 1.61
SMARCD1-204ENST00000547637 FAM3CQ92520 227 aa25.09■■□□□ 1.61
SMARCD1-204ENST00000547637 RMDN1Q96DB5 314 aa25.09■■□□□ 1.61
SMARCD1-204ENST00000547637 KIF2CQ99661 725 aa25.09■■□□□ 1.61
SMARCD1-204ENST00000547637 ZNF334Q9HCZ1 680 aaPredicted RBP25.09■■□□□ 1.61
SMARCD1-204ENST00000547637 NDRG2Q9UN36 371 aaKnown RBP25.09■■□□□ 1.61
SMARCD1-204ENST00000547637 FAM13AO94988 1023 aa25.08■■□□□ 1.61
SMARCD1-204ENST00000547637 FGF19O95750 216 aa25.08■■□□□ 1.61
SMARCD1-204ENST00000547637 KRT18P05783 430 aaKnown RBP25.08■■□□□ 1.61
SMARCD1-204ENST00000547637 FCARP24071 287 aa25.08■■□□□ 1.61
SMARCD1-204ENST00000547637 EPHA5P54756 1037 aa25.08■■□□□ 1.61
SMARCD1-204ENST00000547637 MFSD6LQ8IWD5 586 aa25.08■■□□□ 1.61
SMARCD1-204ENST00000547637 HS6ST3Q8IZP7 471 aa25.08■■□□□ 1.61
SMARCD1-204ENST00000547637 ZBTB44Q8NCP5 570 aa25.08■■□□□ 1.61
SMARCD1-204ENST00000547637 BEST2Q8NFU1 509 aa25.08■■□□□ 1.61
SMARCD1-204ENST00000547637 CSGALNACT1Q8TDX6 532 aa25.08■■□□□ 1.61
SMARCD1-204ENST00000547637 KCNN1Q92952 543 aa25.08■■□□□ 1.61
SMARCD1-204ENST00000547637 TRPV4Q9HBA0 871 aa25.08■■□□□ 1.61
SMARCD1-204ENST00000547637 ASB3Q9Y575 518 aa25.08■■□□□ 1.61
SMARCD1-204ENST00000547637 PDCD11Q14690 1871 aaKnown RBP25.08■■□□□ 1.61
SMARCD1-204ENST00000547637 F5P12259 2224 aa25.07■■□□□ 1.6
SMARCD1-204ENST00000547637 OGTO15294 1046 aa25.07■■□□□ 1.6
SMARCD1-204ENST00000547637 BMP15O95972 392 aa25.07■■□□□ 1.6
SMARCD1-204ENST00000547637 CCR2P41597 374 aa25.07■■□□□ 1.6
SMARCD1-204ENST00000547637 SPAG1Q07617 926 aa25.07■■□□□ 1.6
SMARCD1-204ENST00000547637 GPR17Q13304 367 aa25.07■■□□□ 1.6
SMARCD1-204ENST00000547637 OVOS1Q6IE37 1185 aa25.07■■□□□ 1.6
SMARCD1-204ENST00000547637 VITQ6UXI7 678 aa25.07■■□□□ 1.6
SMARCD1-204ENST00000547637 MAP4K3Q8IVH8 894 aa25.07■■□□□ 1.6
SMARCD1-204ENST00000547637 DCLK2Q8N568 766 aa25.07■■□□□ 1.6
SMARCD1-204ENST00000547637 FAM212AQ96EL1 285 aa25.07■■□□□ 1.6
SMARCD1-204ENST00000547637 MSANTD3Q96H12 275 aa25.07■■□□□ 1.6
SMARCD1-204ENST00000547637 PARVGQ9HBI0 331 aa25.07■■□□□ 1.6
SMARCD1-204ENST00000547637 RAB23Q9ULC3 237 aa25.07■■□□□ 1.6
SMARCD1-204ENST00000547637 TBX20Q9UMR3 447 aa25.07■■□□□ 1.6
SMARCD1-204ENST00000547637 YIPF1Q9Y548 306 aa25.07■■□□□ 1.6
SMARCD1-204ENST00000547637 TIMM13Q9Y5L4 95 aaPredicted RBP25.07■■□□□ 1.6
SMARCD1-204ENST00000547637 OTOGLQ3ZCN5 2332 aa25.07■■□□□ 1.6
SMARCD1-204ENST00000547637 LACTBL1A8MY62 500 aa25.06■■□□□ 1.6
SMARCD1-204ENST00000547637 K7ENM7 598 aa25.06■■□□□ 1.6
SMARCD1-204ENST00000547637 MEFVO15553 781 aaPredicted RBP25.06■■□□□ 1.6
SMARCD1-204ENST00000547637 TYMPP19971 482 aa25.06■■□□□ 1.6
SMARCD1-204ENST00000547637 CACNB1Q02641 598 aaPredicted RBP25.06■■□□□ 1.6
SMARCD1-204ENST00000547637 MYBPC2Q14324 1141 aa25.06■■□□□ 1.6
SMARCD1-204ENST00000547637 ZBTB6Q15916 424 aa25.06■■□□□ 1.6
SMARCD1-204ENST00000547637 TMEM119Q4V9L6 283 aa25.06■■□□□ 1.6
SMARCD1-204ENST00000547637 MAMSTRQ6ZN01 415 aa25.06■■□□□ 1.6
SMARCD1-204ENST00000547637 ZSWIM3Q96MP5 696 aa25.06■■□□□ 1.6
SMARCD1-204ENST00000547637 PGLYRP2Q96PD5 576 aa25.06■■□□□ 1.6
SMARCD1-204ENST00000547637 PIAS3Q9Y6X2 628 aa25.06■■□□□ 1.6
SMARCD1-204ENST00000547637 PATJQ8NI35 1801 aa25.06■■□□□ 1.6
SMARCD1-204ENST00000547637 NPHP3-ACAD11A0A0J9YXS1 232 aa25.05■■□□□ 1.6
SMARCD1-204ENST00000547637 DPYSL4O14531 572 aa25.05■■□□□ 1.6
SMARCD1-204ENST00000547637 ODC1P11926 461 aa25.05■■□□□ 1.6
SMARCD1-204ENST00000547637 GJB2P29033 226 aa25.05■■□□□ 1.6
SMARCD1-204ENST00000547637 AARSP49588 968 aaKnown RBP eCLIP25.05■■□□□ 1.6
SMARCD1-204ENST00000547637 CCR3P51677 355 aa25.05■■□□□ 1.6
SMARCD1-204ENST00000547637 MLLT6P55198 1093 aaPredicted RBP25.05■■□□□ 1.6
SMARCD1-204ENST00000547637 DUSP4Q13115 394 aa25.05■■□□□ 1.6
SMARCD1-204ENST00000547637 MTAPQ13126 283 aa25.05■■□□□ 1.6
SMARCD1-204ENST00000547637 DHX8Q14562 1220 aaKnown RBP25.05■■□□□ 1.6
SMARCD1-204ENST00000547637 TEAD2Q15562 447 aa25.05■■□□□ 1.6
SMARCD1-204ENST00000547637 ITIH5Q86UX2 942 aa25.05■■□□□ 1.6
SMARCD1-204ENST00000547637 GPBP1Q86WP2 473 aa25.05■■□□□ 1.6
SMARCD1-204ENST00000547637 MSTO1Q9BUK6 570 aa25.05■■□□□ 1.6
SMARCD1-204ENST00000547637 CHRDQ9H2X0 955 aa25.05■■□□□ 1.6
SMARCD1-204ENST00000547637 ZHX3Q9H4I2 956 aa25.05■■□□□ 1.6
SMARCD1-204ENST00000547637 LMAN1LQ9HAT1 526 aa25.05■■□□□ 1.6
SMARCD1-204ENST00000547637 UPF2Q9HAU5 1272 aaKnown RBP25.05■■□□□ 1.6
SMARCD1-204ENST00000547637 PRMT8Q9NR22 394 aaPredicted RBP25.05■■□□□ 1.6
SMARCD1-204ENST00000547637 HEPACAM2A8MVW5 462 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms