RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, human

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRF1-210	ENST00000547374	SCYL2	Q6P3W7	929 aa		13.74	□□□□□ -0.21
BRF1-210	ENST00000547374	ANO5	Q75V66	913 aa		13.74	□□□□□ -0.21
BRF1-210	ENST00000547374	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.74	□□□□□ -0.21
BRF1-210	ENST00000547374	RIT2	Q99578	217 aa		13.74	□□□□□ -0.21
BRF1-210	ENST00000547374	SYT11	Q9BT88	431 aa		13.74	□□□□□ -0.21
BRF1-210	ENST00000547374	IQCG	Q9H095	443 aa	Known RBP	13.74	□□□□□ -0.21
BRF1-210	ENST00000547374	GJA3	Q9Y6H8	435 aa		13.74	□□□□□ -0.21
BRF1-210	ENST00000547374	ENTPD5	O75356	428 aa		13.74	□□□□□ -0.21
BRF1-210	ENST00000547374	ATP2A2	P16615	1042 aa	Known RBP	13.74	□□□□□ -0.21
BRF1-210	ENST00000547374	DRG2	P55039	364 aa	Known RBP	13.74	□□□□□ -0.21
BRF1-210	ENST00000547374	SPARCL1	Q14515	664 aa		13.74	□□□□□ -0.21
BRF1-210	ENST00000547374	VPS52	Q8N1B4	723 aa		13.74	□□□□□ -0.21
BRF1-210	ENST00000547374	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.74	□□□□□ -0.21
BRF1-210	ENST00000547374	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.74	□□□□□ -0.21
BRF1-210	ENST00000547374	PAGR1	Q9BTK6	254 aa		13.74	□□□□□ -0.21
BRF1-210	ENST00000547374	TRIM6	Q9C030	488 aa	Predicted RBP	13.74	□□□□□ -0.21
BRF1-210	ENST00000547374	AGO2	Q9UKV8	859 aa	Known RBP	13.74	□□□□□ -0.21
BRF1-210	ENST00000547374	GRAP2	O75791	330 aa		13.74	□□□□□ -0.21
BRF1-210	ENST00000547374	GGPS1	O95749	300 aa		13.74	□□□□□ -0.21
BRF1-210	ENST00000547374	GTF2H1	P32780	548 aa		13.74	□□□□□ -0.21
BRF1-210	ENST00000547374	CYP24A1	Q07973	514 aa		13.74	□□□□□ -0.21
BRF1-210	ENST00000547374	LACTB2	Q53H82	288 aa	Predicted RBP	13.74	□□□□□ -0.21
BRF1-210	ENST00000547374	PPP1R21	Q6ZMI0	780 aa		13.74	□□□□□ -0.21
BRF1-210	ENST00000547374	TMEM130	Q8N3G9	435 aa		13.74	□□□□□ -0.21
BRF1-210	ENST00000547374	TMEM161B	Q8NDZ6	487 aa		13.74	□□□□□ -0.21
BRF1-210	ENST00000547374	MCUR1	Q96AQ8	359 aa		13.74	□□□□□ -0.21
BRF1-210	ENST00000547374	CFAP57	Q96MR6	1250 aa		13.74	□□□□□ -0.21
BRF1-210	ENST00000547374	GINS2	Q9Y248	185 aa		13.74	□□□□□ -0.21
BRF1-210	ENST00000547374	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	GHR	P10912	638 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	NFX1	Q12986	1120 aa	Known RBP	13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	TRPC3	Q13507	836 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	NBPF20	Q3BBV1	942 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	ANKS1B	Q7Z6G8	1248 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	MTDH	Q86UE4	582 aa	Known RBP	13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	C3orf20	Q8ND61	904 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	CKAP2	Q8WWK9	683 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	CENPT	Q96BT3	561 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	MIEF2	Q96C03	454 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	ATG4C	Q96DT6	458 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	MAGED2	Q9UNF1	606 aa	Predicted RBP	13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	CHMP2B	Q9UQN3	213 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	MROH7	Q68CQ1	1323 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	ZBED4	O75132	1171 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	CAP2	P40123	477 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	HIRA	P54198	1017 aa	Predicted RBP	13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	WNT7B	P56706	349 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	GSC	P56915	257 aa	Predicted RBP	13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	MUM1	Q2TAK8	710 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	NAIF1	Q69YI7	327 aa	Predicted RBP	13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	MAML1	Q92585	1016 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	WNK4	Q96J92	1243 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	ROPN1B	Q9BZX4	212 aa	Predicted RBP	13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	ROPN1	Q9HAT0	212 aa	Predicted RBP	13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	RNF146	Q9NTX7	359 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	GGA2	Q9UJY4	613 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	C15orf41	Q9Y2V0	281 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	PCDHB2	Q9Y5E7	798 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	CFAP73	A6NFT4	308 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	YDJC	A8MPS7	323 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	CYP1A2	P05177	515 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	RFX1	P22670	979 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	ADRA1D	P25100	572 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	WDR4	P57081	412 aa	Known RBP	13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	TFDP1	Q14186	410 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	SIX1	Q15475	284 aa	Predicted RBP	13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	SLC15A2	Q16348	729 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	GNPTAB	Q3T906	1256 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	BTNL9	Q6UXG8	535 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	KRT27	Q7Z3Y8	459 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	TTC8	Q8TAM2	541 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	P3H4	Q92791	437 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	SLC13A1	Q9BZW2	595 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	KIAA1683	Q9H0B3	1180 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	LRRC19	Q9H756	370 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	WHRN	Q9P202	907 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	FBXO40	Q9UH90	709 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	RIPK3	Q9Y572	518 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	PCDHA10	Q9Y5I2	948 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	NHSL1	Q5SYE7	1610 aa		13.73	□□□□□ -0.21
BRF1-210	ENST00000547374	XIRP1	Q702N8	1843 aa	Known RBP	13.72	□□□□□ -0.21
BRF1-210	ENST00000547374	E2F8	A0AVK6	867 aa		13.72	□□□□□ -0.21
BRF1-210	ENST00000547374	FSCN2	O14926	492 aa		13.72	□□□□□ -0.21
BRF1-210	ENST00000547374	TAF1B	Q53T94	588 aa	Predicted RBP	13.72	□□□□□ -0.21
BRF1-210	ENST00000547374	SLC27A3	Q5K4L6	730 aa		13.72	□□□□□ -0.21
BRF1-210	ENST00000547374	C3orf62	Q6ZUJ4	267 aa		13.72	□□□□□ -0.21
BRF1-210	ENST00000547374	AKT1S1	Q96B36	256 aa		13.72	□□□□□ -0.21
BRF1-210	ENST00000547374	CFAP36	Q96G28	342 aa		13.72	□□□□□ -0.21
BRF1-210	ENST00000547374	CYTH2	Q99418	400 aa		13.72	□□□□□ -0.21
BRF1-210	ENST00000547374	ZFP69B	Q9UJL9	534 aa		13.72	□□□□□ -0.21
BRF1-210	ENST00000547374	ADGRA3	Q8IWK6	1321 aa		13.72	□□□□□ -0.21
BRF1-210	ENST00000547374	PIK3CD	O00329	1044 aa		13.72	□□□□□ -0.21
BRF1-210	ENST00000547374	MAPK13	O15264	365 aa		13.72	□□□□□ -0.21
BRF1-210	ENST00000547374	SLC1A5	Q15758	541 aa		13.72	□□□□□ -0.21
BRF1-210	ENST00000547374	ANKRD20A3	Q5VUR7	823 aa		13.72	□□□□□ -0.21
BRF1-210	ENST00000547374	FYB2	Q5VWT5	728 aa		13.72	□□□□□ -0.21
BRF1-210	ENST00000547374	SNRNP48	Q6IEG0	339 aa	Known RBP	13.72	□□□□□ -0.21
BRF1-210	ENST00000547374	RFX6	Q8HWS3	928 aa		13.72	□□□□□ -0.21
BRF1-210	ENST00000547374	OR5B17	Q8NGF7	314 aa		13.72	□□□□□ -0.21

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