RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 SOD2P04179 222 aa13.08□□□□□ -0.32
HDAC7-226ENST00000547259 ASGR2P07307 311 aa13.08□□□□□ -0.32
HDAC7-226ENST00000547259 OSTNP61366 133 aa13.08□□□□□ -0.32
HDAC7-226ENST00000547259 ADAM9Q13443 819 aa13.08□□□□□ -0.32
HDAC7-226ENST00000547259 MYBPC2Q14324 1141 aa13.08□□□□□ -0.32
HDAC7-226ENST00000547259 SEZ6Q53EL9 994 aa13.08□□□□□ -0.32
HDAC7-226ENST00000547259 SPATA1Q5VX52 437 aa13.08□□□□□ -0.32
HDAC7-226ENST00000547259 AGMOQ6ZNB7 445 aa13.08□□□□□ -0.32
HDAC7-226ENST00000547259 ZC3H3Q8IXZ2 948 aaKnown RBP13.08□□□□□ -0.32
HDAC7-226ENST00000547259 GPR65Q8IYL9 337 aa13.08□□□□□ -0.32
HDAC7-226ENST00000547259 CEP120Q8N960 986 aa13.08□□□□□ -0.32
HDAC7-226ENST00000547259 AUTS2Q8WXX7 1259 aa13.08□□□□□ -0.32
HDAC7-226ENST00000547259 CEP63Q96MT8 703 aa13.08□□□□□ -0.32
HDAC7-226ENST00000547259 MED15Q96RN5 788 aa13.08□□□□□ -0.32
HDAC7-226ENST00000547259 FAM213AQ9BRX8 229 aa13.08□□□□□ -0.32
HDAC7-226ENST00000547259 CCDC94Q9BW85 323 aaPredicted RBP13.08□□□□□ -0.32
HDAC7-226ENST00000547259 APOL6Q9BWW8 343 aa13.08□□□□□ -0.32
HDAC7-226ENST00000547259 NXF3Q9H4D5 531 aaKnown RBP13.08□□□□□ -0.32
HDAC7-226ENST00000547259 CBX8Q9HC52 389 aa13.08□□□□□ -0.32
HDAC7-226ENST00000547259 KIAA1586Q9HCI6 787 aa13.08□□□□□ -0.32
HDAC7-226ENST00000547259 DNAJB4Q9UDY4 337 aa13.08□□□□□ -0.32
HDAC7-226ENST00000547259 FRMD4BQ9Y2L6 1034 aa13.08□□□□□ -0.32
HDAC7-226ENST00000547259 NFE2L3Q9Y4A8 694 aa13.08□□□□□ -0.32
HDAC7-226ENST00000547259 IPPQ9Y573 584 aa13.08□□□□□ -0.32
HDAC7-226ENST00000547259 VPS13AQ96RL7 3174 aa13.08□□□□□ -0.32
HDAC7-226ENST00000547259 MYO15AQ9UKN7 3530 aa13.08□□□□□ -0.32
HDAC7-226ENST00000547259 EP300Q09472 2414 aaPredicted RBP13.08□□□□□ -0.32
HDAC7-226ENST00000547259 TRIP11Q15643 1979 aa13.07□□□□□ -0.32
HDAC7-226ENST00000547259 TULP1O00294 542 aaPredicted RBP13.07□□□□□ -0.32
HDAC7-226ENST00000547259 NRP1O14786 923 aa13.07□□□□□ -0.32
HDAC7-226ENST00000547259 IKBKBO14920 756 aa13.07□□□□□ -0.32
HDAC7-226ENST00000547259 CNPP09543 421 aaKnown RBP13.07□□□□□ -0.32
HDAC7-226ENST00000547259 WEE2P0C1S8 567 aa13.07□□□□□ -0.32
HDAC7-226ENST00000547259 EPB41P11171 864 aaKnown RBP13.07□□□□□ -0.32
HDAC7-226ENST00000547259 ITGA4P13612 1032 aa13.07□□□□□ -0.32
HDAC7-226ENST00000547259 GRM5P41594 1212 aa13.07□□□□□ -0.32
HDAC7-226ENST00000547259 ACOT2P49753 483 aa13.07□□□□□ -0.32
HDAC7-226ENST00000547259 TPM4P67936 248 aa13.07□□□□□ -0.32
HDAC7-226ENST00000547259 CREMQ03060 361 aa13.07□□□□□ -0.32
HDAC7-226ENST00000547259 SNRNP35Q16560 246 aaKnown RBP13.07□□□□□ -0.32
HDAC7-226ENST00000547259 KYAT1Q16773 422 aa13.07□□□□□ -0.32
HDAC7-226ENST00000547259 CCDC40Q4G0X9 1142 aa13.07□□□□□ -0.32
HDAC7-226ENST00000547259 TMEM173Q86WV6 379 aaPredicted RBP13.07□□□□□ -0.32
HDAC7-226ENST00000547259 ZNF280BQ86YH2 543 aa13.07□□□□□ -0.32
HDAC7-226ENST00000547259 DHX40Q8IX18 779 aaKnown RBP13.07□□□□□ -0.32
HDAC7-226ENST00000547259 TMEM105Q8N8V8 129 aa13.07□□□□□ -0.32
HDAC7-226ENST00000547259 ZSWIM2Q8NEG5 633 aa13.07□□□□□ -0.32
HDAC7-226ENST00000547259 NKD2Q969F2 451 aaPredicted RBP13.07□□□□□ -0.32
HDAC7-226ENST00000547259 EEF2KMTQ96G04 330 aa13.07□□□□□ -0.32
HDAC7-226ENST00000547259 RPS6KC1Q96S38 1066 aa13.07□□□□□ -0.32
HDAC7-226ENST00000547259 COLEC11Q9BWP8 271 aa13.07□□□□□ -0.32
HDAC7-226ENST00000547259 SRRTQ9BXP5 876 aaKnown RBP13.07□□□□□ -0.32
HDAC7-226ENST00000547259 SEMA4AQ9H3S1 761 aa13.07□□□□□ -0.32
HDAC7-226ENST00000547259 PLEKHA4Q9H4M7 779 aa13.07□□□□□ -0.32
HDAC7-226ENST00000547259 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.07□□□□□ -0.32
HDAC7-226ENST00000547259 DMAC2Q9NW81 257 aa13.07□□□□□ -0.32
HDAC7-226ENST00000547259 FBXL21Q9UKT6 434 aa13.07□□□□□ -0.32
HDAC7-226ENST00000547259 DUSP12Q9UNI6 340 aa13.07□□□□□ -0.32
HDAC7-226ENST00000547259 C2orf16Q68DN1 1984 aa13.07□□□□□ -0.32
HDAC7-226ENST00000547259 PLXNA3P51805 1871 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 ZNF233A6NK53 670 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 GOLGA6L19H0YKK7 550 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 INPPL1O15357 1258 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 SLC16A3O15427 465 aaKnown RBP13.06□□□□□ -0.32
HDAC7-226ENST00000547259 FAM189A1O60320 539 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 LILRB3O75022 631 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 GLUD1P00367 558 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 CLTAP09496 248 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 AOC1P19801 751 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 PSMC2P35998 433 aaKnown RBP13.06□□□□□ -0.32
HDAC7-226ENST00000547259 TNFSF9P41273 254 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 CASP4P49662 377 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 YARSP54577 528 aaKnown RBP13.06□□□□□ -0.32
HDAC7-226ENST00000547259 HSP90AA4PQ58FG1 418 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 ZBTB41Q5SVQ8 909 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 LUZP1Q86V48 1076 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 CBWD2Q8IUF1 395 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 FAM114A1Q8IWE2 563 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 FAM186BQ8IYM0 893 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 RDH13Q8NBN7 331 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 SMG8Q8ND04 991 aaKnown RBP13.06□□□□□ -0.32
HDAC7-226ENST00000547259 RNF214Q8ND24 703 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 FLCNQ8NFG4 579 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 TMEM174Q8WUU8 243 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 CNOT6LQ96LI5 555 aaKnown RBP13.06□□□□□ -0.32
HDAC7-226ENST00000547259 ACAP3Q96P50 834 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 HERC2P3Q9BVR0 1158 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 THAP9Q9H5L6 903 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 RPF1Q9H9Y2 349 aaKnown RBP13.06□□□□□ -0.32
HDAC7-226ENST00000547259 KCNK12Q9HB15 430 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 SNTG2Q9NY99 539 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 RBAKQ9NYW8 714 aaPredicted RBP13.06□□□□□ -0.32
HDAC7-226ENST00000547259 MAGEC2Q9UBF1 373 aaPredicted RBP13.06□□□□□ -0.32
HDAC7-226ENST00000547259 WNT16Q9UBV4 365 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 PARP2Q9UGN5 583 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 CDH22Q9UJ99 828 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 CPSF3Q9UKF6 684 aaKnown RBP13.06□□□□□ -0.32
HDAC7-226ENST00000547259 GIT1Q9Y2X7 761 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 HES2Q9Y543 173 aa13.06□□□□□ -0.32
HDAC7-226ENST00000547259 ZNF292O60281 2723 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms