RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 RTN2O75298 545 aa12.77□□□□□ -0.36
CCDC38-202ENST00000546386 CCND3P30281 292 aaPredicted RBP12.77□□□□□ -0.36
CCDC38-202ENST00000546386 ZNF618Q5T7W0 954 aa12.77□□□□□ -0.36
CCDC38-202ENST00000546386 B4GALNT4Q76KP1 1039 aa12.77□□□□□ -0.36
CCDC38-202ENST00000546386 ZDHHC14Q8IZN3 488 aa12.77□□□□□ -0.36
CCDC38-202ENST00000546386 ZFP42Q96MM3 310 aa12.77□□□□□ -0.36
CCDC38-202ENST00000546386 TRIM6Q9C030 488 aaPredicted RBP12.77□□□□□ -0.36
CCDC38-202ENST00000546386 MAPK13O15264 365 aa12.77□□□□□ -0.37
CCDC38-202ENST00000546386 ZRANB2O95218 330 aaKnown RBP eCLIP12.77□□□□□ -0.37
CCDC38-202ENST00000546386 PIGRP01833 764 aa12.77□□□□□ -0.37
CCDC38-202ENST00000546386 PYGMP11217 842 aa12.77□□□□□ -0.37
CCDC38-202ENST00000546386 NSFP46459 744 aaKnown RBP12.77□□□□□ -0.37
CCDC38-202ENST00000546386 SNRPFP62306 86 aaKnown RBP12.77□□□□□ -0.37
CCDC38-202ENST00000546386 FSCN1Q16658 493 aaKnown RBP12.77□□□□□ -0.37
CCDC38-202ENST00000546386 ZNF484Q5JVG2 852 aa12.77□□□□□ -0.37
CCDC38-202ENST00000546386 IQSEC1Q6DN90 963 aa12.77□□□□□ -0.37
CCDC38-202ENST00000546386 TRIM51Q9BSJ1 452 aa12.77□□□□□ -0.37
CCDC38-202ENST00000546386 XYLT2Q9H1B5 865 aa12.77□□□□□ -0.37
CCDC38-202ENST00000546386 ISCUQ9H1K1 167 aa12.77□□□□□ -0.37
CCDC38-202ENST00000546386 KIAA1586Q9HCI6 787 aa12.77□□□□□ -0.37
CCDC38-202ENST00000546386 FAM49BQ9NUQ9 324 aa12.77□□□□□ -0.37
CCDC38-202ENST00000546386 PARP2Q9UGN5 583 aa12.77□□□□□ -0.37
CCDC38-202ENST00000546386 HEXIM1O94992 359 aaKnown RBP12.76□□□□□ -0.37
CCDC38-202ENST00000546386 ASS1P00966 412 aaKnown RBP12.76□□□□□ -0.37
CCDC38-202ENST00000546386 PDGFRBP09619 1106 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 SLC26A2P50443 739 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 CLDN10P78369 228 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 GCNT1Q02742 428 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 PAN2Q504Q3 1202 aaKnown RBP12.76□□□□□ -0.37
CCDC38-202ENST00000546386 ABRAQ8N0Z2 381 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 EMC1Q8N766 993 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 C7orf31Q8N865 590 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 ATG4AQ8WYN0 398 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 LPPQ93052 612 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 ZFYVE28Q9HCC9 887 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 RNF186Q9NXI6 227 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 PCDHB2Q9Y5E7 798 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 MANSC4A6NHS7 340 aaPredicted RBP12.76□□□□□ -0.37
CCDC38-202ENST00000546386 A6NJR5 290 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 H3BQF6 201 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 TTI1O43156 1089 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 TNNC2P02585 160 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 PROZP22891 400 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 ASPAP45381 313 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 CKAP4Q07065 602 aaKnown RBP12.76□□□□□ -0.37
CCDC38-202ENST00000546386 TRIP13Q15645 432 aaPredicted RBP12.76□□□□□ -0.37
CCDC38-202ENST00000546386 CLEC16AQ2KHT3 1053 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 RAB6CQ53S08 254 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 TAB3Q8N5C8 712 aaPredicted RBP12.76□□□□□ -0.37
CCDC38-202ENST00000546386 USP38Q8NB14 1042 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 CCDC102AQ96A19 550 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 C18orf8Q96DM3 657 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 RNPC3Q96LT9 517 aaKnown RBP12.76□□□□□ -0.37
CCDC38-202ENST00000546386 RAB6CQ9H0N0 254 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 AP5M1Q9H0R1 490 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 C2orf40Q9H1Z8 148 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 ADAM22Q9P0K1 906 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 CYTH4Q9UIA0 394 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 TULP2O00295 520 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 DDX3YO15523 660 aaKnown RBP12.76□□□□□ -0.37
CCDC38-202ENST00000546386 GPR32O75388 356 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 RGS7P49802 495 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 SMTNL2Q2TAL5 461 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 KAZNQ674X7 775 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 TXNRD3NBQ6F5E7 133 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 ACAD10Q6JQN1 1059 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 SND1Q7KZF4 910 aaKnown RBP eCLIP12.76□□□□□ -0.37
CCDC38-202ENST00000546386 WDR49Q8IV35 697 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 ANKRD36BP1Q96IX9 119 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 HERPUD2Q9BSE4 406 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 TNFSF13BQ9Y275 285 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 SLC45A1Q9Y2W3 748 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 SNX9Q9Y5X1 595 aa12.76□□□□□ -0.37
CCDC38-202ENST00000546386 SCN1AP35498 2009 aa12.75□□□□□ -0.37
CCDC38-202ENST00000546386 MROH7Q68CQ1 1323 aa12.75□□□□□ -0.37
CCDC38-202ENST00000546386 SART1O43290 800 aaKnown RBP12.75□□□□□ -0.37
CCDC38-202ENST00000546386 ZEB2O60315 1214 aa12.75□□□□□ -0.37
CCDC38-202ENST00000546386 SLC10A3P09131 477 aa12.75□□□□□ -0.37
CCDC38-202ENST00000546386 UNGP13051 313 aaPredicted RBP12.75□□□□□ -0.37
CCDC38-202ENST00000546386 VPS41P49754 854 aa12.75□□□□□ -0.37
CCDC38-202ENST00000546386 LACTBP83111 547 aaPredicted RBP12.75□□□□□ -0.37
CCDC38-202ENST00000546386 HLTFQ14527 1009 aaKnown RBP eCLIP12.75□□□□□ -0.37
CCDC38-202ENST00000546386 CASP8Q14790 479 aa12.75□□□□□ -0.37
CCDC38-202ENST00000546386 KCNT1Q5JUK3 1230 aa12.75□□□□□ -0.37
CCDC38-202ENST00000546386 DENND1BQ6P3S1 775 aa12.75□□□□□ -0.37
CCDC38-202ENST00000546386 ANKS1BQ7Z6G8 1248 aa12.75□□□□□ -0.37
CCDC38-202ENST00000546386 MCOLN2Q8IZK6 566 aa12.75□□□□□ -0.37
CCDC38-202ENST00000546386 LRRN4Q8WUT4 740 aa12.75□□□□□ -0.37
CCDC38-202ENST00000546386 C1orf54Q8WWF1 131 aa12.75□□□□□ -0.37
CCDC38-202ENST00000546386 HAUS1Q96CS2 278 aa12.75□□□□□ -0.37
CCDC38-202ENST00000546386 ACAP3Q96P50 834 aa12.75□□□□□ -0.37
CCDC38-202ENST00000546386 C10orf88Q9H8K7 445 aa12.75□□□□□ -0.37
CCDC38-202ENST00000546386 PRMT7Q9NVM4 692 aaPredicted RBP12.75□□□□□ -0.37
CCDC38-202ENST00000546386 A0A0U1RQG5 324 aaPredicted RBP12.75□□□□□ -0.37
CCDC38-202ENST00000546386 RBM47A0AV96 593 aaKnown RBP12.75□□□□□ -0.37
CCDC38-202ENST00000546386 F8VP50 259 aa12.75□□□□□ -0.37
CCDC38-202ENST00000546386 FLT3P36888 993 aa12.75□□□□□ -0.37
CCDC38-202ENST00000546386 PSEN2P49810 448 aa12.75□□□□□ -0.37
CCDC38-202ENST00000546386 NBPF20Q3BBV1 942 aa12.75□□□□□ -0.37
CCDC38-202ENST00000546386 C10orf76Q5T2E6 689 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms