RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 PDGFRBP09619 1106 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 AKR1A1P14550 325 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 AVPR1AP37288 418 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 STK4Q13043 487 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 GRB10Q13322 594 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 XRRA1Q6P2D8 792 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 SARM1Q6SZW1 724 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 SPATS2Q86XZ4 545 aaKnown RBP9.07□□□□□ -0.96
CLIP1-218ENST00000545889 LMNTD2Q8IXW0 634 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 CCDC13Q8IYE1 715 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 ARHGAP24Q8N264 748 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 MIPOL1Q8TD10 442 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 EXT2Q93063 718 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 CENPKQ9BS16 269 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 TUBE1Q9UJT0 475 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 A0A087X0B3 334 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 TMEM150BA6NC51 233 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 FAM47DPA6NHR8 397 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 E5RI56 91 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 ZBTB39O15060 712 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 CHEK2O96017 543 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 CALB1P05937 261 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 PECAM1P16284 738 aaPredicted RBP9.07□□□□□ -0.96
CLIP1-218ENST00000545889 FXR2P51116 673 aaKnown RBP eCLIP9.07□□□□□ -0.962e-6■■■■■ 27.8
CLIP1-218ENST00000545889 ARHGEF7Q14155 803 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 BBS9Q3SYG4 887 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 KRT39Q6A163 491 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 KLC3Q6P597 504 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 ANGPTL8Q6UXH0 198 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 GPD1LQ8N335 351 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 OR6P1Q8NGX9 317 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 PNKPQ96T60 521 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 C11orf70Q9BRQ4 267 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 CCDC88AQ3V6T2 1871 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 TMEM88BA6NKF7 163 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 RPS6KA3P51812 740 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 PSMC6P62333 389 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 PRAMEP78395 509 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 PRKCEQ02156 737 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 PREPLQ4J6C6 727 aaPredicted RBP9.06□□□□□ -0.96
CLIP1-218ENST00000545889 SH2D4BQ5SQS7 431 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 FAM102AQ5T9C2 384 aaPredicted RBP9.06□□□□□ -0.96
CLIP1-218ENST00000545889 CYP4F22Q6NT55 531 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 TAS2R42Q7RTR8 314 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 KSR1Q8IVT5 923 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 ARHGEF2Q92974 986 aaKnown RBP9.06□□□□□ -0.96
CLIP1-218ENST00000545889 BHMTQ93088 406 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 FAXDC2Q96IV6 333 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 EPAS1Q99814 870 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 HOMER3Q9NSC5 361 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 ABI2Q9NYB9 513 aaPredicted RBP9.06□□□□□ -0.96
CLIP1-218ENST00000545889 PCSK1NQ9UHG2 260 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 BCAP29Q9UHQ4 241 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 CLCA2Q9UQC9 943 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 PLIN4Q96Q06 1357 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 BTBD19C9JJ37 291 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 HIP1RO75146 1068 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 EYA4O95677 639 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 RPA1P27694 616 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 ADORA2AP29274 412 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 RFC5P40937 340 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 TBCCQ15814 346 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 LY6KQ17RY6 165 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 PDIK1LQ8N165 341 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 RIT2Q99578 217 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 REEP2Q9BRK0 252 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 TRPV6Q9H1D0 765 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 NDST4Q9H3R1 872 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 NDFIP2Q9NV92 336 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 EML1O00423 815 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 RNASEH1O60930 286 aaKnown RBP9.06□□□□□ -0.96
CLIP1-218ENST00000545889 SRGAP2O75044 1071 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 LCP1P13796 627 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 HARS2P49590 506 aaKnown RBP9.06□□□□□ -0.96
CLIP1-218ENST00000545889 VAMP7P51809 220 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 ACTR2P61160 394 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 WASHC5Q12768 1159 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 ADCK2Q7Z695 626 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 ENOX1Q8TC92 643 aaKnown RBP9.06□□□□□ -0.96
CLIP1-218ENST00000545889 MUC3BQ9H195 1237 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 CYP39A1Q9NYL5 469 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 AFF4Q9UHB7 1163 aaKnown RBP9.06□□□□□ -0.96
CLIP1-218ENST00000545889 DNAJC12Q9UKB3 198 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 SYNPO2Q9UMS6 1093 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 DUOX1Q9NRD9 1551 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 BCORQ6W2J9 1755 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 H7C4K7 107 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 TCF7P36402 384 aaPredicted RBP9.06□□□□□ -0.96
CLIP1-218ENST00000545889 SLC35F6Q8N357 371 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 PPP1R13LQ8WUF5 828 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 DHX35Q9H5Z1 703 aaKnown RBP9.06□□□□□ -0.96
CLIP1-218ENST00000545889 NAGPAQ9UK23 515 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 FIS1Q9Y3D6 152 aa9.06□□□□□ -0.96
CLIP1-218ENST00000545889 LRRIQ3A6PVS8 624 aaPredicted RBP9.05□□□□□ -0.96
CLIP1-218ENST00000545889 ENC1O14682 589 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 KIAA0391O15091 583 aaKnown RBP9.05□□□□□ -0.96
CLIP1-218ENST00000545889 GUCY2FP51841 1108 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 MRPS25P82663 173 aaKnown RBP9.05□□□□□ -0.96
CLIP1-218ENST00000545889 DPYDQ12882 1025 aa9.05□□□□□ -0.96
CLIP1-218ENST00000545889 NPY5RQ15761 445 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms