RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 SEMA4DQ92854 862 aa13.97□□□□□ -0.17
CDCA3-210ENST00000545368 TIFAQ96CG3 184 aa13.97□□□□□ -0.17
CDCA3-210ENST00000545368 IGSF21Q96ID5 467 aa13.97□□□□□ -0.17
CDCA3-210ENST00000545368 NT5C1BQ96P26 610 aa13.97□□□□□ -0.17
CDCA3-210ENST00000545368 C17orf80Q9BSJ5 609 aa13.97□□□□□ -0.17
CDCA3-210ENST00000545368 CRACR2AQ9BSW2 395 aa13.97□□□□□ -0.17
CDCA3-210ENST00000545368 INTS2Q9H0H0 1204 aaKnown RBP13.97□□□□□ -0.17
CDCA3-210ENST00000545368 VRTNQ9H8Y1 702 aa13.97□□□□□ -0.17
CDCA3-210ENST00000545368 RTN4Q9NQC3 1192 aaKnown RBP13.97□□□□□ -0.17
CDCA3-210ENST00000545368 MARCH5Q9NX47 278 aa13.97□□□□□ -0.17
CDCA3-210ENST00000545368 IFNKQ9P0W0 207 aa13.97□□□□□ -0.17
CDCA3-210ENST00000545368 GOLGA6L3A6NEY3 463 aa13.96□□□□□ -0.17
CDCA3-210ENST00000545368 ASS1P00966 412 aaKnown RBP13.96□□□□□ -0.17
CDCA3-210ENST00000545368 RB1P06400 928 aa13.96□□□□□ -0.17
CDCA3-210ENST00000545368 ODC1P11926 461 aa13.96□□□□□ -0.17
CDCA3-210ENST00000545368 ERVK-21P61565 698 aa13.96□□□□□ -0.17
CDCA3-210ENST00000545368 TAP1Q03518 808 aa13.96□□□□□ -0.17
CDCA3-210ENST00000545368 WDR72Q3MJ13 1102 aa13.96□□□□□ -0.17
CDCA3-210ENST00000545368 TRIM65Q6PJ69 517 aa13.96□□□□□ -0.17
CDCA3-210ENST00000545368 SARM1Q6SZW1 724 aa13.96□□□□□ -0.17
CDCA3-210ENST00000545368 EHBP1Q8NDI1 1231 aa13.96□□□□□ -0.17
CDCA3-210ENST00000545368 SUSD3Q96L08 255 aa13.96□□□□□ -0.17
CDCA3-210ENST00000545368 PCMTD1Q96MG8 357 aaPredicted RBP13.96□□□□□ -0.17
CDCA3-210ENST00000545368 PI4K2AQ9BTU6 479 aa13.96□□□□□ -0.17
CDCA3-210ENST00000545368 C11orf84Q9BUA3 381 aaPredicted RBP13.96□□□□□ -0.17
CDCA3-210ENST00000545368 NIF3L1Q9GZT8 377 aa13.96□□□□□ -0.17
CDCA3-210ENST00000545368 XYLT2Q9H1B5 865 aa13.96□□□□□ -0.17
CDCA3-210ENST00000545368 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.96□□□□□ -0.178e-7■■■■■ 69.9
CDCA3-210ENST00000545368 NXF1Q9UBU9 619 aaKnown RBP13.96□□□□□ -0.17
CDCA3-210ENST00000545368 MTUS1Q9ULD2 1270 aa13.96□□□□□ -0.17
CDCA3-210ENST00000545368 SNX9Q9Y5X1 595 aa13.96□□□□□ -0.17
CDCA3-210ENST00000545368 C5orf67F2Z3F1 127 aa13.95□□□□□ -0.18
CDCA3-210ENST00000545368 F8W810 466 aa13.95□□□□□ -0.18
CDCA3-210ENST00000545368 SPTLC1O15269 473 aa13.95□□□□□ -0.18
CDCA3-210ENST00000545368 HUS1O60921 280 aa13.95□□□□□ -0.18
CDCA3-210ENST00000545368 FGF18O76093 207 aa13.95□□□□□ -0.18
CDCA3-210ENST00000545368 ARHGEF15O94989 841 aa13.95□□□□□ -0.18
CDCA3-210ENST00000545368 ITGB1P05556 798 aa13.95□□□□□ -0.18
CDCA3-210ENST00000545368 BRCC3P46736 316 aa13.95□□□□□ -0.18
CDCA3-210ENST00000545368 AARSP49588 968 aaKnown RBP eCLIP13.95□□□□□ -0.18
CDCA3-210ENST00000545368 PLCB3Q01970 1234 aa13.95□□□□□ -0.18
CDCA3-210ENST00000545368 LRMPQ12912 555 aa13.95□□□□□ -0.18
CDCA3-210ENST00000545368 SYCP1Q15431 976 aa13.95□□□□□ -0.18
CDCA3-210ENST00000545368 TMEM173Q86WV6 379 aaPredicted RBP13.95□□□□□ -0.18
CDCA3-210ENST00000545368 KLHL23Q8NBE8 558 aa13.95□□□□□ -0.18
CDCA3-210ENST00000545368 FBXO22Q8NEZ5 403 aa13.95□□□□□ -0.18
CDCA3-210ENST00000545368 BCL7CQ8WUZ0 217 aaPredicted RBP13.95□□□□□ -0.18
CDCA3-210ENST00000545368 FAXDC2Q96IV6 333 aa13.95□□□□□ -0.18
CDCA3-210ENST00000545368 SENP8Q96LD8 212 aa13.95□□□□□ -0.18
CDCA3-210ENST00000545368 FAM81BQ96LP2 452 aa13.95□□□□□ -0.18
CDCA3-210ENST00000545368 NAP1L5Q96NT1 182 aaPredicted RBP13.95□□□□□ -0.18
CDCA3-210ENST00000545368 ERGIC2Q96RQ1 377 aa13.95□□□□□ -0.18
CDCA3-210ENST00000545368 MMS19Q96T76 1030 aa13.95□□□□□ -0.18
CDCA3-210ENST00000545368 LSM14BQ9BX40 385 aaKnown RBP13.95□□□□□ -0.18
CDCA3-210ENST00000545368 TRIM5Q9C035 493 aa13.95□□□□□ -0.18
CDCA3-210ENST00000545368 XPO4Q9C0E2 1151 aaKnown RBP13.95□□□□□ -0.18
CDCA3-210ENST00000545368 GDAP2Q9NXN4 497 aa13.95□□□□□ -0.18
CDCA3-210ENST00000545368 PUF60Q9UHX1 559 aaKnown RBP13.95□□□□□ -0.18
CDCA3-210ENST00000545368 DSEQ9UL01 958 aa13.95□□□□□ -0.18
CDCA3-210ENST00000545368 A0A1W2PQC6 194 aa13.94□□□□□ -0.18
CDCA3-210ENST00000545368 M0QZQ0 153 aa13.94□□□□□ -0.18
CDCA3-210ENST00000545368 CYB561D2O14569 222 aa13.94□□□□□ -0.18
CDCA3-210ENST00000545368 SYN3O14994 580 aa13.94□□□□□ -0.18
CDCA3-210ENST00000545368 TEX33O43247 280 aa13.94□□□□□ -0.18
CDCA3-210ENST00000545368 SLC9A1P19634 815 aa13.94□□□□□ -0.18
CDCA3-210ENST00000545368 TBXAS1P24557 533 aaPredicted RBP13.94□□□□□ -0.18
CDCA3-210ENST00000545368 PON1P27169 355 aa13.94□□□□□ -0.18
CDCA3-210ENST00000545368 NR1I3Q14994 352 aa13.94□□□□□ -0.18
CDCA3-210ENST00000545368 TIGD5Q53EQ6 642 aa13.94□□□□□ -0.18
CDCA3-210ENST00000545368 SCARA3Q6AZY7 606 aa13.94□□□□□ -0.18
CDCA3-210ENST00000545368 SPOPLQ6IQ16 392 aa13.94□□□□□ -0.18
CDCA3-210ENST00000545368 CD300LGQ6UXG3 332 aa13.94□□□□□ -0.18
CDCA3-210ENST00000545368 SCARA5Q6ZMJ2 495 aa13.94□□□□□ -0.18
CDCA3-210ENST00000545368 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.94□□□□□ -0.18
CDCA3-210ENST00000545368 DPH6Q7L8W6 267 aa13.94□□□□□ -0.18
CDCA3-210ENST00000545368 DDX53Q86TM3 631 aaKnown RBP13.94□□□□□ -0.18
CDCA3-210ENST00000545368 METTL23Q86XA0 190 aa13.94□□□□□ -0.18
CDCA3-210ENST00000545368 PPM1KQ8N3J5 372 aa13.94□□□□□ -0.18
CDCA3-210ENST00000545368 TOP6BLQ8N6T0 577 aa13.94□□□□□ -0.18
CDCA3-210ENST00000545368 APPL2Q8NEU8 664 aa13.94□□□□□ -0.18
CDCA3-210ENST00000545368 LMO3Q8TAP4 145 aa13.94□□□□□ -0.18
CDCA3-210ENST00000545368 HERC2P3Q9BVR0 1158 aa13.94□□□□□ -0.18
CDCA3-210ENST00000545368 PLXNA4Q9HCM2 1894 aa13.94□□□□□ -0.18
CDCA3-210ENST00000545368 PCDHB8Q9UN66 801 aa13.94□□□□□ -0.18
CDCA3-210ENST00000545368 LZTS1Q9Y250 596 aa13.94□□□□□ -0.18
CDCA3-210ENST00000545368 TSC2P49815 1807 aa13.94□□□□□ -0.18
CDCA3-210ENST00000545368 TMEM265A0A087WTH1 108 aa13.93□□□□□ -0.18
CDCA3-210ENST00000545368 I3L4J1 428 aa13.93□□□□□ -0.18
CDCA3-210ENST00000545368 LRRN2O75325 713 aa13.93□□□□□ -0.18
CDCA3-210ENST00000545368 SOD2P04179 222 aa13.93□□□□□ -0.18
CDCA3-210ENST00000545368 TYMPP19971 482 aa13.93□□□□□ -0.18
CDCA3-210ENST00000545368 RFX1P22670 979 aa13.93□□□□□ -0.18
CDCA3-210ENST00000545368 YWHAEP62258 255 aaKnown RBP13.93□□□□□ -0.18
CDCA3-210ENST00000545368 UBE3AQ05086 875 aa13.93□□□□□ -0.18
CDCA3-210ENST00000545368 KCNMA1Q12791 1236 aa13.93□□□□□ -0.18
CDCA3-210ENST00000545368 BMS1Q14692 1282 aaKnown RBP13.93□□□□□ -0.18
CDCA3-210ENST00000545368 USP41Q3LFD5 358 aa13.93□□□□□ -0.18
CDCA3-210ENST00000545368 FAM171A1Q5VUB5 890 aa13.93□□□□□ -0.18
CDCA3-210ENST00000545368 KIAA1841Q6NSI8 718 aa13.93□□□□□ -0.18
CDCA3-210ENST00000545368 CEP57Q86XR8 500 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms