RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 IL10P22301 178 aa9.46□□□□□ -0.89
NECAP1-207ENST00000544891 STIP1P31948 543 aaKnown RBP9.46□□□□□ -0.89
NECAP1-207ENST00000544891 SPRP35270 261 aaPredicted RBP9.46□□□□□ -0.89
NECAP1-207ENST00000544891 FNTAP49354 379 aa9.46□□□□□ -0.89
NECAP1-207ENST00000544891 AP1B1Q10567 949 aa9.46□□□□□ -0.89
NECAP1-207ENST00000544891 GLB1LQ6UWU2 654 aa9.46□□□□□ -0.89
NECAP1-207ENST00000544891 OLFM3Q96PB7 478 aa9.46□□□□□ -0.89
NECAP1-207ENST00000544891 XAB2Q9HCS7 855 aaKnown RBP9.46□□□□□ -0.89
NECAP1-207ENST00000544891 PPP2R3BQ9Y5P8 575 aa9.46□□□□□ -0.89
NECAP1-207ENST00000544891 MYMKA6NI61 221 aa9.46□□□□□ -0.9
NECAP1-207ENST00000544891 CFAP99D6REC4 459 aa9.46□□□□□ -0.9
NECAP1-207ENST00000544891 KDM1AO60341 852 aa9.46□□□□□ -0.9
NECAP1-207ENST00000544891 MTA1Q13330 715 aa9.46□□□□□ -0.9
NECAP1-207ENST00000544891 ARID5BQ14865 1188 aa9.46□□□□□ -0.9
NECAP1-207ENST00000544891 TAF1CQ15572 869 aaPredicted RBP9.46□□□□□ -0.9
NECAP1-207ENST00000544891 C1orf146Q5VVC0 180 aa9.46□□□□□ -0.9
NECAP1-207ENST00000544891 LZICQ8WZA0 190 aa9.46□□□□□ -0.9
NECAP1-207ENST00000544891 NCLNQ969V3 563 aa9.46□□□□□ -0.9
NECAP1-207ENST00000544891 DCUN1D1Q96GG9 259 aa9.46□□□□□ -0.9
NECAP1-207ENST00000544891 PPP1R16BQ96T49 567 aa9.46□□□□□ -0.9
NECAP1-207ENST00000544891 ZNF518BQ9C0D4 1074 aa9.46□□□□□ -0.9
NECAP1-207ENST00000544891 RANBP17Q9H2T7 1088 aaKnown RBP9.46□□□□□ -0.9
NECAP1-207ENST00000544891 RGL1Q9NZL6 768 aa9.46□□□□□ -0.9
NECAP1-207ENST00000544891 HACL1Q9UJ83 578 aa9.46□□□□□ -0.9
NECAP1-207ENST00000544891 TPX2Q9ULW0 747 aaKnown RBP9.46□□□□□ -0.9
NECAP1-207ENST00000544891 PIN4Q9Y237 131 aaKnown RBP9.46□□□□□ -0.9
NECAP1-207ENST00000544891 MED21Q13503 144 aa9.46□□□□□ -0.9
NECAP1-207ENST00000544891 RASSF3Q86WH2 238 aa9.46□□□□□ -0.9
NECAP1-207ENST00000544891 MMGT1Q8N4V1 131 aa9.46□□□□□ -0.9
NECAP1-207ENST00000544891 EGFL8Q99944 293 aa9.46□□□□□ -0.9
NECAP1-207ENST00000544891 ING2Q9H160 280 aa9.46□□□□□ -0.9
NECAP1-207ENST00000544891 PSMC3IPQ9P2W1 217 aaPredicted RBP9.46□□□□□ -0.9
NECAP1-207ENST00000544891 STX18Q9P2W9 335 aaKnown RBP9.46□□□□□ -0.9
NECAP1-207ENST00000544891 FNDC3AQ9Y2H6 1198 aaKnown RBP9.46□□□□□ -0.9
NECAP1-207ENST00000544891 ESRRBO95718 433 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 HIST1H2AGP0C0S8 130 aaPredicted RBP9.45□□□□□ -0.9
NECAP1-207ENST00000544891 PRLRP16471 622 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 HIST1H2ADP20671 130 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 ADORA2BP29275 332 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 HDAC4P56524 1084 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 ZNF211Q13398 564 aaPredicted RBP9.45□□□□□ -0.9
NECAP1-207ENST00000544891 ZNF484Q5JVG2 852 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 RARS2Q5T160 578 aaKnown RBP9.45□□□□□ -0.9
NECAP1-207ENST00000544891 AGGF1Q8N302 714 aaeCLIP9.45□□□□□ -0.9
NECAP1-207ENST00000544891 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.45□□□□□ -0.9
NECAP1-207ENST00000544891 GPRC5AQ8NFJ5 357 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 RAPGEF5Q92565 580 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 GFM2Q969S9 779 aaKnown RBP9.45□□□□□ -0.9
NECAP1-207ENST00000544891 HIST1H2AHQ96KK5 128 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 HIST1H2AJQ99878 128 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 H2AFJQ9BTM1 129 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 JMJD4Q9H9V9 463 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 PIDD1Q9HB75 910 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 TTC7AQ9ULT0 858 aaPredicted RBP9.45□□□□□ -0.9
NECAP1-207ENST00000544891 UBQLN1Q9UMX0 589 aaKnown RBP9.45□□□□□ -0.9
NECAP1-207ENST00000544891 BCL9LQ86UU0 1499 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 SRGAP2O75044 1071 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 KLHL2O95198 593 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 TROAPQ12815 778 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 PTPN21Q16825 1174 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 C3orf20Q8ND61 904 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 KCNK16Q96T55 309 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 OSBPL8Q9BZF1 889 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 IL25Q9H293 177 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 TRABDQ9H4I3 376 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 SYNPO2Q9UMS6 1093 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 KBTBD13C9JR72 458 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 F9P00740 461 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 ATP1A1P05023 1023 aaKnown RBP9.45□□□□□ -0.9
NECAP1-207ENST00000544891 ICAM1P05362 532 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 GCLCP48506 637 aaPredicted RBP9.45□□□□□ -0.9
NECAP1-207ENST00000544891 RGS4P49798 205 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 NPEPPSP55786 919 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 PRKCEQ02156 737 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 NCAPHQ15003 741 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 ATF7IP2Q5U623 682 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 NOTUMQ6P988 496 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 FAM47EQ6ZV65 393 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 LINC00523Q86TU6 105 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 OLA1Q9NTK5 396 aaKnown RBP9.45□□□□□ -0.9
NECAP1-207ENST00000544891 IRAK4Q9NWZ3 460 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 SNX9Q9Y5X1 595 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 RNF103-CHMP3A0A140T963 221 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 LRRIQ3A6PVS8 624 aaPredicted RBP9.45□□□□□ -0.9
NECAP1-207ENST00000544891 ITGA4P13612 1032 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 GUCY1A2P33402 732 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 ANTXR2P58335 489 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 POU5F1BQ06416 359 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 STK4Q13043 487 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 INPP5AQ14642 412 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 HP1BP3Q5SSJ5 553 aaPredicted RBP9.45□□□□□ -0.9
NECAP1-207ENST00000544891 NAPEPLDQ6IQ20 393 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 POTEAQ6S8J7 498 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 CCNI2Q6ZMN8 369 aaPredicted RBP9.45□□□□□ -0.9
NECAP1-207ENST00000544891 ANKS3Q6ZW76 656 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 PATL1Q86TB9 770 aaKnown RBP9.45□□□□□ -0.9
NECAP1-207ENST00000544891 SLC35G2Q8TBE7 412 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 CEP19Q96LK0 163 aa9.45□□□□□ -0.9
NECAP1-207ENST00000544891 MRPL46Q9H2W6 279 aaKnown RBP9.45□□□□□ -0.9
NECAP1-207ENST00000544891 PLAGL2Q9UPG8 496 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms