RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 SCARA3Q6AZY7 606 aa12.37□□□□□ -0.43
YBX3-216ENST00000544622 ELMSAN1Q6PJG2 1045 aa12.37□□□□□ -0.43
YBX3-216ENST00000544622 KRBA2Q6ZNG9 492 aa12.37□□□□□ -0.43
YBX3-216ENST00000544622 ZDHHC14Q8IZN3 488 aa12.37□□□□□ -0.43
YBX3-216ENST00000544622 FMR1NBQ8N0W7 255 aaPredicted RBP12.37□□□□□ -0.43
YBX3-216ENST00000544622 APPL2Q8NEU8 664 aa12.37□□□□□ -0.43
YBX3-216ENST00000544622 ENGASEQ8NFI3 743 aa12.37□□□□□ -0.43
YBX3-216ENST00000544622 DPP3Q9NY33 737 aa12.37□□□□□ -0.43
YBX3-216ENST00000544622 RBAKQ9NYW8 714 aaPredicted RBP12.37□□□□□ -0.43
YBX3-216ENST00000544622 HSPBP1Q9NZL4 362 aa12.37□□□□□ -0.43
YBX3-216ENST00000544622 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.36□□□□□ -0.43
YBX3-216ENST00000544622 ZNF233A6NK53 670 aa12.36□□□□□ -0.43
YBX3-216ENST00000544622 C2CD4DB7Z1M9 353 aa12.36□□□□□ -0.43
YBX3-216ENST00000544622 H7C4K7 107 aa12.36□□□□□ -0.43
YBX3-216ENST00000544622 DCXO43602 365 aa12.36□□□□□ -0.43
YBX3-216ENST00000544622 N4BP1O75113 896 aaKnown RBP12.36□□□□□ -0.43
YBX3-216ENST00000544622 RHOBTB3O94955 611 aa12.36□□□□□ -0.43
YBX3-216ENST00000544622 RPN1P04843 607 aaKnown RBP12.36□□□□□ -0.43
YBX3-216ENST00000544622 CYP11A1P05108 521 aa12.36□□□□□ -0.43
YBX3-216ENST00000544622 C8AP07357 584 aa12.36□□□□□ -0.43
YBX3-216ENST00000544622 HNRNPA1P09651 372 aaKnown RBP eCLIP12.36□□□□□ -0.43
YBX3-216ENST00000544622 PRR29P0C7W0 189 aa12.36□□□□□ -0.43
YBX3-216ENST00000544622 YWHAHQ04917 246 aaPredicted RBP12.36□□□□□ -0.43
YBX3-216ENST00000544622 CBWD2Q8IUF1 395 aa12.36□□□□□ -0.43
YBX3-216ENST00000544622 C1orf127Q8N9H9 656 aa12.36□□□□□ -0.43
YBX3-216ENST00000544622 FSIP1Q8NA03 581 aa12.36□□□□□ -0.43
YBX3-216ENST00000544622 SENP8Q96LD8 212 aa12.36□□□□□ -0.43
YBX3-216ENST00000544622 C1QTNF1Q9BXJ1 281 aa12.36□□□□□ -0.43
YBX3-216ENST00000544622 OXCT2Q9BYC2 517 aaPredicted RBP12.36□□□□□ -0.43
YBX3-216ENST00000544622 GZF1Q9H116 711 aaPredicted RBP12.36□□□□□ -0.43
YBX3-216ENST00000544622 KCTD10Q9H3F6 313 aa12.36□□□□□ -0.43
YBX3-216ENST00000544622 KIAA1586Q9HCI6 787 aa12.36□□□□□ -0.43
YBX3-216ENST00000544622 PDE11AQ9HCR9 933 aa12.36□□□□□ -0.43
YBX3-216ENST00000544622 DMAC2Q9NW81 257 aa12.36□□□□□ -0.43
YBX3-216ENST00000544622 CGNQ9P2M7 1197 aaKnown RBP12.36□□□□□ -0.43
YBX3-216ENST00000544622 MUTYHQ9UIF7 546 aa12.36□□□□□ -0.43
YBX3-216ENST00000544622 NR2E1Q9Y466 385 aa12.36□□□□□ -0.43
YBX3-216ENST00000544622 TIMM13Q9Y5L4 95 aaPredicted RBP12.36□□□□□ -0.43
YBX3-216ENST00000544622 ARHGEF37A1IGU5 675 aa12.35□□□□□ -0.43
YBX3-216ENST00000544622 CTXN3Q4LDR2 81 aa12.35□□□□□ -0.43
YBX3-216ENST00000544622 TPGS2Q68CL5 300 aa12.35□□□□□ -0.43
YBX3-216ENST00000544622 ZNF280DQ6N043 979 aa12.35□□□□□ -0.43
YBX3-216ENST00000544622 SLC9A9Q8IVB4 645 aa12.35□□□□□ -0.43
YBX3-216ENST00000544622 NELFCDQ8IXH7 590 aa12.35□□□□□ -0.43
YBX3-216ENST00000544622 TCEAL8Q8IYN2 117 aa12.35□□□□□ -0.43
YBX3-216ENST00000544622 PLCD3Q8N3E9 789 aa12.35□□□□□ -0.43
YBX3-216ENST00000544622 SMG7Q92540 1137 aaKnown RBP12.35□□□□□ -0.43
YBX3-216ENST00000544622 INTS13Q9NVM9 706 aa12.35□□□□□ -0.43
YBX3-216ENST00000544622 SIX4Q9UIU6 781 aa12.35□□□□□ -0.43
YBX3-216ENST00000544622 CIZ1Q9ULV3 898 aaPredicted RBP12.35□□□□□ -0.43
YBX3-216ENST00000544622 MAFFQ9ULX9 164 aa12.35□□□□□ -0.43
YBX3-216ENST00000544622 C2orf16Q68DN1 1984 aa12.35□□□□□ -0.43
YBX3-216ENST00000544622 DENND4AQ7Z401 1863 aa12.35□□□□□ -0.43
YBX3-216ENST00000544622 PTPRJQ12913 1337 aa12.35□□□□□ -0.43
YBX3-216ENST00000544622 KPNA7A9QM74 516 aa12.34□□□□□ -0.43
YBX3-216ENST00000544622 CLIC2O15247 247 aa12.34□□□□□ -0.43
YBX3-216ENST00000544622 SEC24AO95486 1093 aa12.34□□□□□ -0.43
YBX3-216ENST00000544622 VNN2O95498 520 aa12.34□□□□□ -0.43
YBX3-216ENST00000544622 TAF6P49848 677 aa12.34□□□□□ -0.43
YBX3-216ENST00000544622 GPR17Q13304 367 aa12.34□□□□□ -0.43
YBX3-216ENST00000544622 KCNB1Q14721 858 aa12.34□□□□□ -0.43
YBX3-216ENST00000544622 SNRNP35Q16560 246 aaKnown RBP12.34□□□□□ -0.43
YBX3-216ENST00000544622 DSTYKQ6XUX3 929 aa12.34□□□□□ -0.43
YBX3-216ENST00000544622 CCDC149Q6ZUS6 474 aa12.34□□□□□ -0.43
YBX3-216ENST00000544622 LIMS2Q7Z4I7 341 aa12.34□□□□□ -0.43
YBX3-216ENST00000544622 XXYLT1Q8NBI6 393 aa12.34□□□□□ -0.43
YBX3-216ENST00000544622 OR5B17Q8NGF7 314 aa12.34□□□□□ -0.43
YBX3-216ENST00000544622 SPATA20Q8TB22 786 aa12.34□□□□□ -0.43
YBX3-216ENST00000544622 SLC7A14Q8TBB6 771 aa12.34□□□□□ -0.43
YBX3-216ENST00000544622 CACTINQ8WUQ7 758 aaKnown RBP12.34□□□□□ -0.43
YBX3-216ENST00000544622 EDAQ92838 391 aa12.34□□□□□ -0.43
YBX3-216ENST00000544622 FAM84AQ96KN4 292 aa12.34□□□□□ -0.43
YBX3-216ENST00000544622 MFSD14AQ96MC6 490 aa12.34□□□□□ -0.43
YBX3-216ENST00000544622 RTP3Q9BQQ7 232 aa12.34□□□□□ -0.43
YBX3-216ENST00000544622 AFF4Q9UHB7 1163 aaKnown RBP12.34□□□□□ -0.43
YBX3-216ENST00000544622 ITGA11Q9UKX5 1188 aa12.34□□□□□ -0.43
YBX3-216ENST00000544622 CLUHO75153 1309 aa12.34□□□□□ -0.43
YBX3-216ENST00000544622 SCN1AP35498 2009 aa12.33□□□□□ -0.43
YBX3-216ENST00000544622 WDFY4Q6ZS81 3184 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 OR6C75A6NL08 312 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 SPDYE4A6NLX3 237 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 PDXKO00764 312 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 CYB561D2O14569 222 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 ITGB3P05106 788 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 ODC1P11926 461 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 SP100P23497 879 aaPredicted RBP12.33□□□□□ -0.44
YBX3-216ENST00000544622 PNPLA4P41247 253 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 CLDN10P78369 228 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 ZXDAP98168 799 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 TFAMQ00059 246 aaKnown RBP12.33□□□□□ -0.44
YBX3-216ENST00000544622 MYBPC2Q14324 1141 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 PSMD6Q15008 389 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 SURF1Q15526 300 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 PTPN21Q16825 1174 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 PPM1LQ5SGD2 360 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 LIN9Q5TKA1 542 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 OVOS1Q6IE37 1185 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 RNF19BQ6ZMZ0 732 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 HS2ST1Q7LGA3 356 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 OTOP3Q7RTS5 596 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms