RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 EPC1Q9H2F5 836 aa13.62□□□□□ -0.23
PAAF1-214ENST00000544552 CISHQ9NSE2 258 aa13.62□□□□□ -0.23
PAAF1-214ENST00000544552 ITGA11Q9UKX5 1188 aa13.62□□□□□ -0.23
PAAF1-214ENST00000544552 PACSIN2Q9UNF0 486 aaPredicted RBP13.62□□□□□ -0.23
PAAF1-214ENST00000544552 TRIP12Q14669 1992 aaPredicted RBP13.62□□□□□ -0.23
PAAF1-214ENST00000544552 SCN10AQ9Y5Y9 1956 aa13.62□□□□□ -0.23
PAAF1-214ENST00000544552 MIF4GDA9UHW6 222 aaKnown RBP13.61□□□□□ -0.23
PAAF1-214ENST00000544552 RARBP10826 455 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 MCM3P25205 808 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 PRMT2P55345 433 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 PRKCZQ05513 592 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 PHF13Q86YI8 300 aaPredicted RBP13.61□□□□□ -0.23
PAAF1-214ENST00000544552 RUBCNQ92622 972 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 ZNF653Q96CK0 615 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 ZNF518BQ9C0D4 1074 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 CYP3A43Q9HB55 503 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 TTC7AQ9ULT0 858 aaPredicted RBP13.61□□□□□ -0.23
PAAF1-214ENST00000544552 ALG6Q9Y672 507 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 CITO14578 2027 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 MYADML2A6NDP7 307 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 KCNK3O14649 394 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 ATP8B1O43520 1251 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 LSM8O95777 96 aaKnown RBP13.61□□□□□ -0.23
PAAF1-214ENST00000544552 P4HA1P13674 534 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 FGFR4P22455 802 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 NSFP46459 744 aaKnown RBP13.61□□□□□ -0.23
PAAF1-214ENST00000544552 NOMO3P69849 1222 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 RBP5P82980 135 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 ZNF200P98182 395 aaPredicted RBP13.61□□□□□ -0.23
PAAF1-214ENST00000544552 CACNB2Q08289 660 aaPredicted RBP13.61□□□□□ -0.23
PAAF1-214ENST00000544552 TMEM62Q0P6H9 643 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 GLE1Q53GS7 698 aaKnown RBP13.61□□□□□ -0.23
PAAF1-214ENST00000544552 CCDC70Q6NSX1 233 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 ALKAL1Q6UXT8 129 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 RPAINQ86UA6 219 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 SESTD1Q86VW0 696 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 RASGEF1CQ8N431 466 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 TTC39CQ8N584 583 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 CYFIP2Q96F07 1278 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 NUP85Q9BW27 656 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 PDCL3Q9H2J4 239 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 GOLPH3Q9H4A6 298 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 CNOT8Q9UFF9 292 aaKnown RBP13.61□□□□□ -0.23
PAAF1-214ENST00000544552 SRRDQ9UH36 339 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 GTF2IRD1Q9UHL9 959 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 PCDHGC3Q9UN70 934 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 GINS2Q9Y248 185 aa13.61□□□□□ -0.23
PAAF1-214ENST00000544552 DDX3YO15523 660 aaKnown RBP13.6□□□□□ -0.23
PAAF1-214ENST00000544552 THAP12O43422 761 aa13.6□□□□□ -0.23
PAAF1-214ENST00000544552 ADAMTS4O75173 837 aa13.6□□□□□ -0.23
PAAF1-214ENST00000544552 NPTXRO95502 500 aa13.6□□□□□ -0.23
PAAF1-214ENST00000544552 ITGB3P05106 788 aa13.6□□□□□ -0.23
PAAF1-214ENST00000544552 KRT19P08727 400 aa13.6□□□□□ -0.23
PAAF1-214ENST00000544552 PAEPP09466 180 aa13.6□□□□□ -0.23
PAAF1-214ENST00000544552 RHOXF2BP0C7M4 288 aa13.6□□□□□ -0.23
PAAF1-214ENST00000544552 HSPA1AP0DMV8 641 aaKnown RBP13.6□□□□□ -0.23
PAAF1-214ENST00000544552 HSPA1BP0DMV9 641 aaKnown RBP13.6□□□□□ -0.23
PAAF1-214ENST00000544552 CST5P28325 142 aaPredicted RBP13.6□□□□□ -0.23
PAAF1-214ENST00000544552 CTCFP49711 727 aaPredicted RBP13.6□□□□□ -0.23
PAAF1-214ENST00000544552 YARSP54577 528 aaKnown RBP13.6□□□□□ -0.23
PAAF1-214ENST00000544552 CLUL1Q15846 466 aa13.6□□□□□ -0.23
PAAF1-214ENST00000544552 ZBTB6Q15916 424 aa13.6□□□□□ -0.23
PAAF1-214ENST00000544552 WDR72Q3MJ13 1102 aa13.6□□□□□ -0.23
PAAF1-214ENST00000544552 TMCO3Q6UWJ1 677 aa13.6□□□□□ -0.23
PAAF1-214ENST00000544552 MON1BQ7L1V2 547 aa13.6□□□□□ -0.23
PAAF1-214ENST00000544552 USP38Q8NB14 1042 aa13.6□□□□□ -0.23
PAAF1-214ENST00000544552 ZNF564Q8TBZ8 553 aaPredicted RBP13.6□□□□□ -0.23
PAAF1-214ENST00000544552 TMEM40Q8WWA1 233 aa13.6□□□□□ -0.23
PAAF1-214ENST00000544552 MS4A14Q96JA4 679 aa13.6□□□□□ -0.23
PAAF1-214ENST00000544552 PNKPQ96T60 521 aa13.6□□□□□ -0.23
PAAF1-214ENST00000544552 RHOXF2Q9BQY4 288 aa13.6□□□□□ -0.23
PAAF1-214ENST00000544552 CELF4Q9BZC1 486 aaKnown RBP13.6□□□□□ -0.23
PAAF1-214ENST00000544552 WNT8AQ9H1J5 351 aa13.6□□□□□ -0.23
PAAF1-214ENST00000544552 CARD9Q9H257 536 aa13.6□□□□□ -0.23
PAAF1-214ENST00000544552 DPP3Q9NY33 737 aa13.6□□□□□ -0.23
PAAF1-214ENST00000544552 TMEM59LQ9UK28 342 aa13.6□□□□□ -0.23
PAAF1-214ENST00000544552 CLSTN1O94985 981 aa13.59□□□□□ -0.23
PAAF1-214ENST00000544552 ZRANB2O95218 330 aaKnown RBP eCLIP13.59□□□□□ -0.23
PAAF1-214ENST00000544552 CALCAP01258 141 aa13.59□□□□□ -0.23
PAAF1-214ENST00000544552 WEE2P0C1S8 567 aa13.59□□□□□ -0.23
PAAF1-214ENST00000544552 HSPA8P11142 646 aaKnown RBP13.59□□□□□ -0.23
PAAF1-214ENST00000544552 CDH5P33151 784 aaPredicted RBP13.59□□□□□ -0.23
PAAF1-214ENST00000544552 C1QBPQ07021 282 aaKnown RBP13.59□□□□□ -0.23
PAAF1-214ENST00000544552 LIN9Q5TKA1 542 aa13.59□□□□□ -0.23
PAAF1-214ENST00000544552 NAA35Q5VZE5 725 aa13.59□□□□□ -0.23
PAAF1-214ENST00000544552 KLHDC9Q8NEP7 349 aa13.59□□□□□ -0.23
PAAF1-214ENST00000544552 CPA5Q8WXQ8 436 aa13.59□□□□□ -0.23
PAAF1-214ENST00000544552 KIF12Q96FN5 646 aa13.59□□□□□ -0.23
PAAF1-214ENST00000544552 SNX27Q96L92 541 aa13.59□□□□□ -0.23
PAAF1-214ENST00000544552 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.59□□□□□ -0.231e-7■■■■■ 32.7
PAAF1-214ENST00000544552 ARFGAP3Q9NP61 516 aa13.59□□□□□ -0.23
PAAF1-214ENST00000544552 NXF1Q9UBU9 619 aaKnown RBP13.59□□□□□ -0.23
PAAF1-214ENST00000544552 RRP9O43818 475 aaKnown RBP13.58□□□□□ -0.24
PAAF1-214ENST00000544552 ERLIN1O75477 346 aa13.58□□□□□ -0.24
PAAF1-214ENST00000544552 PGK1P00558 417 aa13.58□□□□□ -0.24
PAAF1-214ENST00000544552 CAP1Q01518 475 aa13.58□□□□□ -0.24
PAAF1-214ENST00000544552 C2orf54Q08AI8 447 aa13.58□□□□□ -0.24
PAAF1-214ENST00000544552 NBPF20Q3BBV1 942 aa13.58□□□□□ -0.24
PAAF1-214ENST00000544552 XKR4Q5GH76 650 aa13.58□□□□□ -0.24
PAAF1-214ENST00000544552 CC2D1AQ6P1N0 951 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms