RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 PSMD7P51665 324 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 PPP4CP60510 307 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 RINT1Q6NUQ1 792 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 SPATA31D4Q6ZUB0 917 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 ZNF564Q8TBZ8 553 aaPredicted RBP13.54□□□□□ -0.24
PDZD4-209ENST00000544474 PRPF31Q8WWY3 499 aaKnown RBP13.54□□□□□ -0.24
PDZD4-209ENST00000544474 CPA5Q8WXQ8 436 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 ARAP2Q8WZ64 1704 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 KAT6AQ92794 2004 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 PPP1R14BQ96C90 147 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 PI4K2AQ9BTU6 479 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 TRIM43BA6NCK2 446 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 MAP3K6O95382 1288 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 GAS8O95995 478 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 CFBP00751 764 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 RARGP13631 454 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 ADRA1DP25100 572 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 ATP5DP30049 168 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 CA8P35219 290 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 PGM1P36871 562 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 DLG4P78352 724 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 IZUMO3Q5VZ72 239 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 RGS9BPQ6ZS82 235 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 CROCCP2Q86T23 111 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 FAM178BQ8IXR5 827 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 TBC1D16Q8TBP0 767 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 OLFM3Q96PB7 478 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 NAP1L4Q99733 375 aaKnown RBP13.54□□□□□ -0.24
PDZD4-209ENST00000544474 LOC100653049A0A140TA62 436 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 KRT34O76011 436 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 BMP3P12645 472 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 NAT1P18440 290 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 CHRNA3P32297 505 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 ADARP55265 1226 aaKnown RBP13.54□□□□□ -0.24
PDZD4-209ENST00000544474 BTG3Q14201 252 aaPredicted RBP13.54□□□□□ -0.24
PDZD4-209ENST00000544474 ANKRD35Q8N283 1001 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 PPP1R14CQ8TAE6 165 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 GATA6Q92908 595 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 MPP4Q96JB8 637 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 AGBL1Q96MI9 1066 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 RUNDC3BQ96NL0 473 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 NR1H4Q96RI1 486 aaPredicted RBP13.54□□□□□ -0.24
PDZD4-209ENST00000544474 HAPLN3Q96S86 360 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 SIKE1Q9BRV8 207 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 SLC13A1Q9BZW2 595 aa13.54□□□□□ -0.24
PDZD4-209ENST00000544474 SAE1Q9UBE0 346 aaPredicted RBP13.54□□□□□ -0.24
PDZD4-209ENST00000544474 ANKRD36CQ5JPF3 1778 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 FAM187AA6NFU0 413 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 FAM47DPA6NHR8 397 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 B2RBV5 119 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 HAUS5O94927 633 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 TAC1P20366 129 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 MAPK4P31152 587 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 PRKCIP41743 596 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 ALDH18A1P54886 795 aaKnown RBP13.53□□□□□ -0.24
PDZD4-209ENST00000544474 BBS9Q3SYG4 887 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 C1orf146Q5VVC0 180 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 KLC3Q6P597 504 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 CATSPER3Q86XQ3 398 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 RASGEF1CQ8N431 466 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 RFWD2Q8NHY2 731 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 SLC26A7Q8TE54 656 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 CKAP2Q8WWK9 683 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 HES6Q96HZ4 224 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 AGAP3Q96P47 875 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 DNAJC18Q9H819 358 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 JMJD4Q9H9V9 463 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 MTMR4Q9NYA4 1195 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 COL4A1P02462 1669 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 A0A0A6YYK5 440 aaPredicted RBP13.53□□□□□ -0.24
PDZD4-209ENST00000544474 A0A0J9YVX5 310 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 DDX3YO15523 660 aaKnown RBP13.53□□□□□ -0.24
PDZD4-209ENST00000544474 POTEJP0CG39 1038 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 WDR4P57081 412 aaKnown RBP13.53□□□□□ -0.24
PDZD4-209ENST00000544474 RTP1P59025 263 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 SPARCL1Q14515 664 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 ATP13A4Q4VNC1 1196 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 NANOGNBQ7Z5D8 188 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 SCUBE1Q8IWY4 988 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 SYT2Q8N9I0 419 aaPredicted RBP13.53□□□□□ -0.24
PDZD4-209ENST00000544474 LRRN4Q8WUT4 740 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 SLC35C1Q96A29 364 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 MPHOSPH6Q99547 160 aaKnown RBP13.53□□□□□ -0.24
PDZD4-209ENST00000544474 OXCT2Q9BYC2 517 aaPredicted RBP13.53□□□□□ -0.24
PDZD4-209ENST00000544474 NACA2Q9H009 215 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 INTS2Q9H0H0 1204 aaKnown RBP13.53□□□□□ -0.24
PDZD4-209ENST00000544474 LRMDAQ9H2I8 198 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 LRRC4BQ9NT99 713 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 GINM1Q9NU53 330 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 R3HDM2Q9Y2K5 976 aaKnown RBP13.53□□□□□ -0.24
PDZD4-209ENST00000544474 MYH1P12882 1939 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 MYH4Q9Y623 1939 aa13.53□□□□□ -0.24
PDZD4-209ENST00000544474 PDXKO00764 312 aa13.52□□□□□ -0.24
PDZD4-209ENST00000544474 OR6B1O95007 311 aa13.52□□□□□ -0.24
PDZD4-209ENST00000544474 LYNP07948 512 aa13.52□□□□□ -0.24
PDZD4-209ENST00000544474 TROVE2P10155 538 aaKnown RBP eCLIP13.52□□□□□ -0.24
PDZD4-209ENST00000544474 POLGP54098 1239 aaPredicted RBP13.52□□□□□ -0.24
PDZD4-209ENST00000544474 OXCT1P55809 520 aa13.52□□□□□ -0.24
PDZD4-209ENST00000544474 PLOD1Q02809 727 aaPredicted RBP13.52□□□□□ -0.24
PDZD4-209ENST00000544474 EFTUD2Q15029 972 aaKnown RBP eCLIP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms