RNA–Protein interactions for RNA: ENST00000544425.2

SPDEF-202, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPDEF, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-202ENST00000544425 MAP9Q49MG5 647 aa17.12■□□□□ 0.33
SPDEF-202ENST00000544425 NAA35Q5VZE5 725 aa17.12■□□□□ 0.33
SPDEF-202ENST00000544425 MFSD14CQ5VZR4 134 aa17.12■□□□□ 0.33
SPDEF-202ENST00000544425 NOTUMQ6P988 496 aa17.12■□□□□ 0.33
SPDEF-202ENST00000544425 CATSPER4Q7RTX7 472 aa17.12■□□□□ 0.33
SPDEF-202ENST00000544425 UBL4BQ8N7F7 174 aa17.12■□□□□ 0.33
SPDEF-202ENST00000544425 TRPV1Q8NER1 839 aa17.12■□□□□ 0.33
SPDEF-202ENST00000544425 FUT8Q9BYC5 575 aa17.12■□□□□ 0.33
SPDEF-202ENST00000544425 ZNF518BQ9C0D4 1074 aa17.12■□□□□ 0.33
SPDEF-202ENST00000544425 ITGA11Q9UKX5 1188 aa17.12■□□□□ 0.33
SPDEF-202ENST00000544425 TREHO43280 583 aa17.11■□□□□ 0.33
SPDEF-202ENST00000544425 LSM8O95777 96 aaKnown RBP17.11■□□□□ 0.33
SPDEF-202ENST00000544425 KRT19P08727 400 aa17.11■□□□□ 0.33
SPDEF-202ENST00000544425 CYBAP13498 195 aa17.11■□□□□ 0.33
SPDEF-202ENST00000544425 COMTP21964 271 aa17.11■□□□□ 0.33
SPDEF-202ENST00000544425 C1QBPQ07021 282 aaKnown RBP17.11■□□□□ 0.33
SPDEF-202ENST00000544425 PTPROQ16827 1216 aa17.11■□□□□ 0.33
SPDEF-202ENST00000544425 LIN9Q5TKA1 542 aa17.11■□□□□ 0.33
SPDEF-202ENST00000544425 C8orf74Q6P047 294 aa17.11■□□□□ 0.33
SPDEF-202ENST00000544425 DNAJB3Q8WWF6 145 aa17.11■□□□□ 0.33
SPDEF-202ENST00000544425 CD101Q93033 1021 aa17.11■□□□□ 0.33
SPDEF-202ENST00000544425 CYP3A43Q9HB55 503 aa17.11■□□□□ 0.33
SPDEF-202ENST00000544425 RNF216Q9NWF9 866 aaPredicted RBP17.11■□□□□ 0.33
SPDEF-202ENST00000544425 DMGDHQ9UI17 866 aaKnown RBP17.11■□□□□ 0.33
SPDEF-202ENST00000544425 PCDHGC3Q9UN70 934 aa17.11■□□□□ 0.33
SPDEF-202ENST00000544425 MAP2K7O14733 419 aa17.1■□□□□ 0.33
SPDEF-202ENST00000544425 ATMINO43313 823 aaPredicted RBP17.1■□□□□ 0.33
SPDEF-202ENST00000544425 ITGB3P05106 788 aa17.1■□□□□ 0.33
SPDEF-202ENST00000544425 CFHP08603 1231 aa17.1■□□□□ 0.33
SPDEF-202ENST00000544425 WEE2P0C1S8 567 aa17.1■□□□□ 0.33
SPDEF-202ENST00000544425 P4HA1P13674 534 aa17.1■□□□□ 0.33
SPDEF-202ENST00000544425 FGFR4P22455 802 aa17.1■□□□□ 0.33
SPDEF-202ENST00000544425 PEX5P50542 639 aa17.1■□□□□ 0.33
SPDEF-202ENST00000544425 RNASE9P60153 205 aaKnown RBP17.1■□□□□ 0.33
SPDEF-202ENST00000544425 LACTBP83111 547 aaPredicted RBP17.1■□□□□ 0.33
SPDEF-202ENST00000544425 TMEM62Q0P6H9 643 aa17.1■□□□□ 0.33
SPDEF-202ENST00000544425 WDR72Q3MJ13 1102 aa17.1■□□□□ 0.33
SPDEF-202ENST00000544425 NAP1L3Q99457 506 aaPredicted RBP17.1■□□□□ 0.33
SPDEF-202ENST00000544425 OSMRQ99650 979 aa17.1■□□□□ 0.33
SPDEF-202ENST00000544425 STIM2Q9P246 746 aa17.1■□□□□ 0.33
SPDEF-202ENST00000544425 CHORDC1Q9UHD1 332 aaPredicted RBP17.1■□□□□ 0.33
SPDEF-202ENST00000544425 NOC2LQ9Y3T9 749 aaKnown RBP17.1■□□□□ 0.33
SPDEF-202ENST00000544425 FAM170AA1A519 330 aa17.1■□□□□ 0.33
SPDEF-202ENST00000544425 CCDC66A2RUB6 948 aa17.1■□□□□ 0.33
SPDEF-202ENST00000544425 KIF3CO14782 793 aa17.1■□□□□ 0.33
SPDEF-202ENST00000544425 PAEPP09466 180 aa17.1■□□□□ 0.33
SPDEF-202ENST00000544425 CD58P19256 250 aa17.1■□□□□ 0.33
SPDEF-202ENST00000544425 RRM1P23921 792 aa17.1■□□□□ 0.33
SPDEF-202ENST00000544425 CTNNA2P26232 953 aa17.1■□□□□ 0.33
SPDEF-202ENST00000544425 TNFRSF8P28908 595 aa17.1■□□□□ 0.33
SPDEF-202ENST00000544425 CDH5P33151 784 aaPredicted RBP17.1■□□□□ 0.33
SPDEF-202ENST00000544425 CRYBB1P53674 252 aaPredicted RBP17.1■□□□□ 0.33
SPDEF-202ENST00000544425 RBP5P82980 135 aa17.1■□□□□ 0.33
SPDEF-202ENST00000544425 PTP4A2Q12974 167 aa17.1■□□□□ 0.33
SPDEF-202ENST00000544425 DCAF12L1Q5VU92 463 aa17.1■□□□□ 0.33
SPDEF-202ENST00000544425 HDXQ7Z353 690 aa17.1■□□□□ 0.33
SPDEF-202ENST00000544425 C7orf31Q8N865 590 aa17.1■□□□□ 0.33
SPDEF-202ENST00000544425 ZSWIM1Q9BR11 485 aa17.1■□□□□ 0.33
SPDEF-202ENST00000544425 UPF3AQ9H1J1 476 aaKnown RBP17.1■□□□□ 0.33
SPDEF-202ENST00000544425 GPBP1L1Q9HC44 474 aaPredicted RBP17.1■□□□□ 0.33
SPDEF-202ENST00000544425 MRPL47Q9HD33 250 aaKnown RBP17.1■□□□□ 0.33
SPDEF-202ENST00000544425 ADAM22Q9P0K1 906 aa17.1■□□□□ 0.33
SPDEF-202ENST00000544425 NXF1Q9UBU9 619 aaKnown RBP17.1■□□□□ 0.33
SPDEF-202ENST00000544425 GINS2Q9Y248 185 aa17.1■□□□□ 0.33
SPDEF-202ENST00000544425 PCDHA3Q9Y5H8 950 aa17.1■□□□□ 0.33
SPDEF-202ENST00000544425 EVPLQ92817 2033 aa17.09■□□□□ 0.33
SPDEF-202ENST00000544425 NPTXRO95502 500 aa17.09■□□□□ 0.33
SPDEF-202ENST00000544425 SLC1A1P43005 524 aa17.09■□□□□ 0.33
SPDEF-202ENST00000544425 PLEKHA7Q6IQ23 1121 aa17.09■□□□□ 0.33
SPDEF-202ENST00000544425 REM2Q8IYK8 340 aaPredicted RBP17.09■□□□□ 0.33
SPDEF-202ENST00000544425 HDAC7Q8WUI4 952 aa17.09■□□□□ 0.33
SPDEF-202ENST00000544425 MTG1Q9BT17 334 aaPredicted RBP17.09■□□□□ 0.33
SPDEF-202ENST00000544425 DPP3Q9NY33 737 aa17.09■□□□□ 0.33
SPDEF-202ENST00000544425 POLIQ9UNA4 740 aa17.09■□□□□ 0.33
SPDEF-202ENST00000544425 KRIT1O00522 736 aa17.08■□□□□ 0.33
SPDEF-202ENST00000544425 SASH3O75995 380 aa17.08■□□□□ 0.33
SPDEF-202ENST00000544425 MMP8P22894 467 aa17.08■□□□□ 0.33
SPDEF-202ENST00000544425 CTNNA1P35221 906 aaKnown RBP17.08■□□□□ 0.33
SPDEF-202ENST00000544425 FLT3LGP49771 235 aa17.08■□□□□ 0.33
SPDEF-202ENST00000544425 ZNF200P98182 395 aaPredicted RBP17.08■□□□□ 0.33
SPDEF-202ENST00000544425 NOGQ13253 232 aa17.08■□□□□ 0.33
SPDEF-202ENST00000544425 SNX17Q15036 470 aa17.08■□□□□ 0.33
SPDEF-202ENST00000544425 ZBTB6Q15916 424 aa17.08■□□□□ 0.33
SPDEF-202ENST00000544425 PPP2R5EQ16537 467 aa17.08■□□□□ 0.33
SPDEF-202ENST00000544425 TAF2Q6P1X5 1199 aa17.08■□□□□ 0.33
SPDEF-202ENST00000544425 TTC39CQ8N584 583 aa17.08■□□□□ 0.33
SPDEF-202ENST00000544425 TMEM35BQ8NCS4 154 aa17.08■□□□□ 0.33
SPDEF-202ENST00000544425 TRIB2Q92519 343 aa17.08■□□□□ 0.33
SPDEF-202ENST00000544425 ALG3Q92685 438 aa17.08■□□□□ 0.33
SPDEF-202ENST00000544425 RNPC3Q96LT9 517 aaKnown RBP17.08■□□□□ 0.33
SPDEF-202ENST00000544425 TSPAN18Q96SJ8 248 aa17.08■□□□□ 0.33
SPDEF-202ENST00000544425 KRT12Q99456 494 aa17.08■□□□□ 0.33
SPDEF-202ENST00000544425 ARHGAP39Q9C0H5 1083 aa17.08■□□□□ 0.33
SPDEF-202ENST00000544425 LHX5Q9H2C1 402 aa17.08■□□□□ 0.33
SPDEF-202ENST00000544425 GABRQQ9UN88 632 aa17.08■□□□□ 0.33
SPDEF-202ENST00000544425 AGAP1Q9UPQ3 857 aa17.08■□□□□ 0.33
SPDEF-202ENST00000544425 SCINQ9Y6U3 715 aa17.08■□□□□ 0.33
SPDEF-202ENST00000544425 MYO1FO00160 1098 aa17.07■□□□□ 0.32
SPDEF-202ENST00000544425 SEPT4O43236 478 aa17.07■□□□□ 0.32
SPDEF-202ENST00000544425 MED7O43513 233 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms