RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 B3GALT6Q96L58 329 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 MMS19Q96T76 1030 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 TTPALQ9BTX7 342 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 EMILIN2Q9BXX0 1053 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 GPR62Q9BZJ7 368 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 THAP9Q9H5L6 903 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 NSUN3Q9H649 340 aaKnown RBP6.8□□□□□ -1.32
LTBR-212ENST00000543542 TLE6Q9H808 572 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 TMEM8AQ9HCN3 771 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 NGRNQ9NPE2 291 aaKnown RBP6.8□□□□□ -1.32
LTBR-212ENST00000543542 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.8□□□□□ -1.32
LTBR-212ENST00000543542 LMCD1Q9NZU5 365 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 NFE2L3Q9Y4A8 694 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 SNX9Q9Y5X1 595 aa6.8□□□□□ -1.32
LTBR-212ENST00000543542 ANO9A1A5B4 782 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 KCNJ18B7U540 433 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 GOLGA6L19H0YKK7 550 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 H7C4K7 107 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 PIRO00625 290 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 CYB561D2O14569 222 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 N4BP1O75113 896 aaKnown RBP6.79□□□□□ -1.32
LTBR-212ENST00000543542 CST3P01034 146 aaPredicted RBP6.79□□□□□ -1.32
LTBR-212ENST00000543542 HLA-DRAP01903 254 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 AFPP02771 609 aaKnown RBP6.79□□□□□ -1.32
LTBR-212ENST00000543542 C4BPAP04003 597 aaKnown RBP6.79□□□□□ -1.32
LTBR-212ENST00000543542 ADH1AP07327 375 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 SRGAP2BP0DMP2 458 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 CTSAP10619 480 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 P4HA1P13674 534 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 DNAJB1P25685 340 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 KLRC2P26717 231 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 TKTP29401 623 aaKnown RBP6.79□□□□□ -1.32
LTBR-212ENST00000543542 ATICP31939 592 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 GTF2H1P32780 548 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 IRS1P35568 1242 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 NRIP1P48552 1158 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 ZNF165P49910 485 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 ARPP19P56211 112 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 MYL6P60660 151 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 MYL7Q01449 175 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 CREMQ03060 361 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 YWHAHQ04917 246 aaPredicted RBP6.79□□□□□ -1.32
LTBR-212ENST00000543542 ENPEPQ07075 957 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 KCNJ12Q14500 433 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 SGSM1Q2NKQ1 1148 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 WDR72Q3MJ13 1102 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 CTXN3Q4LDR2 81 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 ZNF667Q5HYK9 610 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 WDR44Q5JSH3 913 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 TDRD10Q5VZ19 366 aaKnown RBP6.79□□□□□ -1.32
LTBR-212ENST00000543542 ZNF280DQ6N043 979 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 PRSS55Q6UWB4 352 aaPredicted RBP6.79□□□□□ -1.32
LTBR-212ENST00000543542 SCARA5Q6ZMJ2 495 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 ANKS3Q6ZW76 656 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 SV2AQ7L0J3 742 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 ZC3H3Q8IXZ2 948 aaKnown RBP6.79□□□□□ -1.32
LTBR-212ENST00000543542 THEM5Q8N1Q8 247 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 SUSD3Q96L08 255 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 SENP8Q96LD8 212 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 GUCD1Q96NT3 240 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 ZBP1Q9H171 429 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 TSPY26PQ9H489 355 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.79□□□□□ -1.32
LTBR-212ENST00000543542 SAMSN1Q9NSI8 373 aaKnown RBP6.79□□□□□ -1.32
LTBR-212ENST00000543542 FANCLQ9NW38 375 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 MTMR10Q9NXD2 777 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 NXF1Q9UBU9 619 aaKnown RBP6.79□□□□□ -1.32
LTBR-212ENST00000543542 DSEQ9UL01 958 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 PCDHB8Q9UN66 801 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 PCDHGC5Q9Y5F6 944 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 TIMM13Q9Y5L4 95 aaPredicted RBP6.79□□□□□ -1.32
LTBR-212ENST00000543542 MTCH2Q9Y6C9 303 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 CHD9Q3L8U1 2897 aa6.79□□□□□ -1.32
LTBR-212ENST00000543542 TRIOBPQ9H2D6 2365 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 HIDE1A8MVS5 230 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 SYN3O14994 580 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 PER2O15055 1255 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 CAVIN2O95810 425 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 CPB1P15086 417 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 RPL17P18621 184 aaKnown RBP6.78□□□□□ -1.32
LTBR-212ENST00000543542 TRIM21P19474 475 aaKnown RBP6.78□□□□□ -1.32
LTBR-212ENST00000543542 FGFR3P22607 806 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 IGFBP6P24592 240 aaPredicted RBP6.78□□□□□ -1.32
LTBR-212ENST00000543542 EEF1GP26641 437 aaKnown RBP6.78□□□□□ -1.32
LTBR-212ENST00000543542 FMO5P49326 533 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 CLDN10P78369 228 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 DSG1Q02413 1049 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 PPP3CAQ08209 521 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 KCNH2Q12809 1159 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 ADGRE1Q14246 886 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 PTPN14Q15678 1187 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 MAN2A1Q16706 1144 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 ZACNQ401N2 412 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 TCP11X2Q5H9J9 407 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 TCEAL5Q5H9L2 206 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 RTP2Q5QGT7 225 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 VARS2Q5ST30 1063 aaKnown RBP6.78□□□□□ -1.32
LTBR-212ENST00000543542 OVOS1Q6IE37 1185 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 LLGL2Q6P1M3 1020 aa6.78□□□□□ -1.32
LTBR-212ENST00000543542 ELMSAN1Q6PJG2 1045 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms