RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 NOMO2Q5JPE7 1267 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 CROCCP2Q86T23 111 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 CCDC50Q8IVM0 306 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 RNF139Q8WU17 664 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 EXOC4Q96A65 974 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 TSPYL1Q9H0U9 437 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 ST7Q9NRC1 585 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 FAN1Q9Y2M0 1017 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 SNX9Q9Y5X1 595 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 MACROD2A1Z1Q3 448 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 RECQL4O94761 1208 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 SGPL1O95470 568 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 ARF4P18085 180 aaPredicted RBP8.49□□□□□ -1.05
TRIM59-208ENST00000543469 CD58P19256 250 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 ZNF135P52742 658 aaPredicted RBP8.49□□□□□ -1.05
TRIM59-208ENST00000543469 HSP90B2PQ58FF3 399 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 EFHC1Q5JVL4 640 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 KLHDC9Q8NEP7 349 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 CPB2Q96IY4 423 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 TMX1Q9H3N1 280 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 CYLDQ9NQC7 956 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 PRDM10Q9NQV6 1147 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 TMEM161AQ9NX61 479 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 SNTG2Q9NY99 539 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 ZBTB39O15060 712 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 ADAMTS3O15072 1205 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 TREHO43280 583 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 KRT7P08729 469 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 BCAT1P54687 386 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 DAAM2Q86T65 1068 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 TTC13Q8NBP0 860 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 WNT8AQ9H1J5 351 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.49□□□□□ -1.05
TRIM59-208ENST00000543469 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.49□□□□□ -1.05
TRIM59-208ENST00000543469 ZNF236Q9UL36 1845 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 GOLGA6L10A6NI86 522 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 OR6C75A6NL08 312 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 M0QYV0 167 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 CXCL8P10145 99 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 TUSC3Q13454 348 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 TAF3Q5VWG9 929 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 SCARA5Q6ZMJ2 495 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 SAR1BQ9Y6B6 198 aa8.49□□□□□ -1.05
TRIM59-208ENST00000543469 CASP4P49662 377 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 OR6B2Q6IFH4 312 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 DAW1Q8N136 415 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 C2orf15Q8WU43 125 aaKnown RBP8.48□□□□□ -1.05
TRIM59-208ENST00000543469 SAMD11Q96NU1 681 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 MTMR12Q9C0I1 747 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 TMEM110-MUSTN1A8MSY1 372 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 EVI5O60447 810 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 URODP06132 367 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 ZFXP17010 805 aaPredicted RBP8.48□□□□□ -1.05
TRIM59-208ENST00000543469 TYMPP19971 482 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 HNRNPH3P31942 346 aaKnown RBP8.48□□□□□ -1.05
TRIM59-208ENST00000543469 KPNA1P52294 538 aaPredicted RBP8.48□□□□□ -1.05
TRIM59-208ENST00000543469 TBX2Q13207 712 aaPredicted RBP8.48□□□□□ -1.05
TRIM59-208ENST00000543469 FAM26DQ5JW98 314 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 MAATS1Q7Z4T9 603 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 ADGRF2Q8IZF7 708 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 C1orf131Q8NDD1 294 aaKnown RBP8.48□□□□□ -1.05
TRIM59-208ENST00000543469 BSNDQ8WZ55 320 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 C18orf25Q96B23 403 aaPredicted RBP8.48□□□□□ -1.05
TRIM59-208ENST00000543469 SNX27Q96L92 541 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 ZNF558Q96NG5 402 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 POLD4Q9HCU8 107 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 WBP1LQ9NX94 342 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 GTF3C4Q9UKN8 822 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 COQ4Q9Y3A0 265 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 FHOD1Q9Y613 1164 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 SF3B1O75533 1304 aaKnown RBP eCLIP8.48□□□□□ -1.055e-6■■■■□ 20.1
TRIM59-208ENST00000543469 TMEM150BA6NC51 233 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 CYB561D2O14569 222 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 DAPK3O43293 454 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 FGF19O95750 216 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 GAS8O95995 478 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 KCNE1P15382 129 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 OR1G1P47890 313 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 CASP5P51878 434 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 PIGHQ14442 188 aaPredicted RBP8.48□□□□□ -1.05
TRIM59-208ENST00000543469 KRT81Q14533 505 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 JADE1Q6IE81 842 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 PPP1R13BQ96KQ4 1090 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 CNOT8Q9UFF9 292 aaKnown RBP8.48□□□□□ -1.05
TRIM59-208ENST00000543469 MTRF1LQ9UGC7 380 aaKnown RBP8.48□□□□□ -1.05
TRIM59-208ENST00000543469 CDH9Q9ULB4 789 aa8.48□□□□□ -1.05
TRIM59-208ENST00000543469 F8VZ95 297 aa8.47□□□□□ -1.05
TRIM59-208ENST00000543469 PODXLO00592 558 aa8.47□□□□□ -1.05
TRIM59-208ENST00000543469 SYN3O14994 580 aa8.47□□□□□ -1.05
TRIM59-208ENST00000543469 MYCP01106 439 aaPredicted RBP8.47□□□□□ -1.05
TRIM59-208ENST00000543469 GYPCP04921 128 aa8.47□□□□□ -1.05
TRIM59-208ENST00000543469 FAM200BP0CF97 657 aa8.47□□□□□ -1.05
TRIM59-208ENST00000543469 C1QBPQ07021 282 aaKnown RBP8.47□□□□□ -1.05
TRIM59-208ENST00000543469 TFDP2Q14188 446 aa8.47□□□□□ -1.05
TRIM59-208ENST00000543469 EPC2Q52LR7 807 aa8.47□□□□□ -1.05
TRIM59-208ENST00000543469 ZNF662Q6ZS27 426 aa8.47□□□□□ -1.05
TRIM59-208ENST00000543469 ITIH5Q86UX2 942 aa8.47□□□□□ -1.05
TRIM59-208ENST00000543469 KSR1Q8IVT5 923 aa8.47□□□□□ -1.05
TRIM59-208ENST00000543469 PAF1Q8N7H5 531 aa8.47□□□□□ -1.05
TRIM59-208ENST00000543469 STKLD1Q8NE28 680 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms