RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 TNFRSF6BO95407 300 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 NDST3O95803 873 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 TBX18O95935 607 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 EFEMP2O95967 443 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 AMY1AP04745 511 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 INHBBP09529 407 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 SREBF1P36956 1147 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 GALK1P51570 392 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 SESN2P58004 480 aaPredicted RBP4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 LINC00310P59036 64 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 ERVFC1P60507 584 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 IL13RA1P78552 427 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 CD69Q07108 199 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 SLC13A2Q13183 592 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 FAM110CQ1W6H9 321 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 CCDC96Q2M329 555 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 ADCK5Q3MIX3 580 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 SLC44A4Q53GD3 710 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 GPATCH4Q5T3I0 446 aaKnown RBP4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 ANKRD45Q5TZF3 282 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 EMC10Q5UCC4 262 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 AGAP9Q5VTM2 703 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 KANK2Q63ZY3 851 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 TANGO2Q6ICL3 276 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 SULT6B1Q6IMI4 303 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 LIN54Q6MZP7 749 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 PDXDC1Q6P996 788 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 PAQR3Q6TCH7 311 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 DSTYKQ6XUX3 929 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 LIPIQ6XZB0 460 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 RNF44Q7L0R7 432 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 FASTKD5Q7L8L6 764 aaKnown RBP4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 MOGAT3Q86VF5 341 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 PROSER1Q86XN7 944 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 MIB1Q86YT6 1006 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 OR8H2Q8N162 312 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 ZGPATQ8N5A5 531 aaKnown RBP4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 SIMC1Q8NDZ2 872 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 STT3BQ8TCJ2 826 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 SNX33Q8WV41 574 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 KCNN1Q92952 543 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 CYFIP2Q96F07 1278 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 LRRC46Q96FV0 321 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 ANP32EQ9BTT0 268 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 DPH1Q9BZG8 443 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 TNFRSF12AQ9NP84 129 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 RIC8AQ9NPQ8 531 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 RBPJLQ9UBG7 517 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 DNAI1Q9UI46 699 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 MED16Q9Y2X0 877 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 TOP2AP11388 1531 aaKnown RBP4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 GRIN2BQ13224 1484 aa4.54□□□□□ -1.68
SFSWAP-211ENST00000542813 A0A0B4J269 797 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 F2RL2O00254 374 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 BTN3A1O00481 513 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 HOXC11O43248 304 aaPredicted RBP4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 NUAK1O60285 661 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 PSPNO60542 156 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 GPR32O75388 356 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 GFPT2O94808 682 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 DDX58O95786 925 aaKnown RBP4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 ITGA5P08648 1049 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 ATP1A3P13637 1013 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 HDCP19113 662 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 STAT5AP42229 794 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 KCNJ5P48544 419 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 CARSP49589 748 aaKnown RBP4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 ANTXR2P58335 489 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 EXOSC9Q06265 439 aaKnown RBP4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 STILQ15468 1287 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 MAN2A1Q16706 1144 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 SKIDA1Q1XH10 827 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 SPATA1Q5VX52 437 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 RRAGBQ5VZM2 374 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 BORAQ6PGQ7 559 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 UNC13DQ70J99 1090 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 NLRX1Q86UT6 975 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 MICU3Q86XE3 530 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 C2CD5Q86YS7 1000 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 FTSJ3Q8IY81 847 aaKnown RBP4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 UNC5BQ8IZJ1 945 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 LILRA2Q8N149 483 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 PQLC1Q8N2U9 271 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 SPPL3Q8TCT6 385 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 NUP133Q8WUM0 1156 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 ZNF480Q8WV37 535 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 TNPO1Q92973 898 aaKnown RBP4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 TSPAN17Q96FV3 270 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 GDF15Q99988 308 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 KATNAL1Q9BW62 490 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 C1orf43Q9BWL3 253 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 KRTAP9-8Q9BYQ0 159 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 OSBPL6Q9BZF3 934 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 DHX36Q9H2U1 1008 aaKnown RBP4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 LDAHQ9H6V9 325 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 SMURF2Q9HAU4 748 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 BCO1Q9HAY6 547 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 SAYSD1Q9NPB0 183 aa4.53□□□□□ -1.68
SFSWAP-211ENST00000542813 NECTIN3Q9NQS3 549 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms