RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 CCDC191Q8NCU4 936 aa6.65□□□□□ -1.34
XRCC4-206ENST00000542685 OR52N2Q8NGI0 321 aa6.65□□□□□ -1.34
XRCC4-206ENST00000542685 RSAD2Q8WXG1 361 aa6.65□□□□□ -1.34
XRCC4-206ENST00000542685 TSPAN18Q96SJ8 248 aa6.65□□□□□ -1.34
XRCC4-206ENST00000542685 PRRX2Q99811 253 aa6.65□□□□□ -1.34
XRCC4-206ENST00000542685 LSM14BQ9BX40 385 aaKnown RBP6.65□□□□□ -1.34
XRCC4-206ENST00000542685 RWDD1Q9H446 243 aaPredicted RBP6.65□□□□□ -1.34
XRCC4-206ENST00000542685 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.65□□□□□ -1.34
XRCC4-206ENST00000542685 MAPRE3Q9UPY8 281 aa6.65□□□□□ -1.34
XRCC4-206ENST00000542685 DMRT1Q9Y5R6 373 aa6.65□□□□□ -1.34
XRCC4-206ENST00000542685 PTPRCP08575 1304 aa6.65□□□□□ -1.35
XRCC4-206ENST00000542685 CCDC171Q6TFL3 1326 aa6.65□□□□□ -1.35
XRCC4-206ENST00000542685 PPIP5K1Q6PFW1 1433 aa6.65□□□□□ -1.35
XRCC4-206ENST00000542685 TRAPPC8Q9Y2L5 1435 aa6.65□□□□□ -1.35
XRCC4-206ENST00000542685 ADGRB1O14514 1584 aa6.65□□□□□ -1.35
XRCC4-206ENST00000542685 PIK3C2BO00750 1634 aa6.65□□□□□ -1.35
XRCC4-206ENST00000542685 ZCCHC11Q5TAX3 1644 aaKnown RBP6.65□□□□□ -1.35
XRCC4-206ENST00000542685 PES1O00541 588 aaKnown RBP6.64□□□□□ -1.35
XRCC4-206ENST00000542685 ENPP3O14638 875 aa6.64□□□□□ -1.35
XRCC4-206ENST00000542685 LTA4HP09960 611 aaKnown RBP6.64□□□□□ -1.35
XRCC4-206ENST00000542685 GYPEP15421 78 aa6.64□□□□□ -1.35
XRCC4-206ENST00000542685 RARSP54136 660 aaKnown RBP6.64□□□□□ -1.35
XRCC4-206ENST00000542685 LGALS4P56470 323 aa6.64□□□□□ -1.35
XRCC4-206ENST00000542685 RWDD2BP57060 319 aa6.64□□□□□ -1.35
XRCC4-206ENST00000542685 BIRC2Q13490 618 aa6.64□□□□□ -1.35
XRCC4-206ENST00000542685 VPS72Q15906 364 aa6.64□□□□□ -1.35
XRCC4-206ENST00000542685 PITRM1Q5JRX3 1037 aa6.64□□□□□ -1.35
XRCC4-206ENST00000542685 AP1ARQ63HQ0 302 aa6.64□□□□□ -1.35
XRCC4-206ENST00000542685 LAIR1Q6GTX8 287 aa6.64□□□□□ -1.35
XRCC4-206ENST00000542685 KRBA2Q6ZNG9 492 aa6.64□□□□□ -1.35
XRCC4-206ENST00000542685 HDGFL2Q7Z4V5 671 aaPredicted RBP6.64□□□□□ -1.35
XRCC4-206ENST00000542685 SLC41A1Q8IVJ1 513 aa6.64□□□□□ -1.35
XRCC4-206ENST00000542685 SH3GL3Q99963 347 aa6.64□□□□□ -1.35
XRCC4-206ENST00000542685 PDCD2LQ9BRP1 358 aa6.64□□□□□ -1.35
XRCC4-206ENST00000542685 KCTD10Q9H3F6 313 aa6.64□□□□□ -1.35
XRCC4-206ENST00000542685 ETAA1Q9NY74 926 aa6.64□□□□□ -1.35
XRCC4-206ENST00000542685 LRRFIP2Q9Y608 721 aaKnown RBP6.64□□□□□ -1.35
XRCC4-206ENST00000542685 IL16Q14005 1332 aa6.64□□□□□ -1.35
XRCC4-206ENST00000542685 ATP7AQ04656 1500 aa6.64□□□□□ -1.35
XRCC4-206ENST00000542685 TMEM191CA6NGB0 347 aa6.63□□□□□ -1.35
XRCC4-206ENST00000542685 NEMFO60524 1076 aa6.63□□□□□ -1.35
XRCC4-206ENST00000542685 BPIP17213 487 aa6.63□□□□□ -1.35
XRCC4-206ENST00000542685 NOS1P29475 1434 aa6.63□□□□□ -1.35
XRCC4-206ENST00000542685 APOBEC3AP31941 199 aaPredicted RBP6.63□□□□□ -1.35
XRCC4-206ENST00000542685 KDRP35968 1356 aa6.63□□□□□ -1.35
XRCC4-206ENST00000542685 MAGEA8P43361 318 aa6.63□□□□□ -1.35
XRCC4-206ENST00000542685 ID4P47928 161 aa6.63□□□□□ -1.35
XRCC4-206ENST00000542685 CD151P48509 253 aa6.63□□□□□ -1.35
XRCC4-206ENST00000542685 GYS2P54840 703 aa6.63□□□□□ -1.35
XRCC4-206ENST00000542685 PURAQ00577 322 aaKnown RBP6.63□□□□□ -1.35
XRCC4-206ENST00000542685 DHX8Q14562 1220 aaKnown RBP6.63□□□□□ -1.35
XRCC4-206ENST00000542685 MVPQ14764 893 aaKnown RBP6.63□□□□□ -1.35
XRCC4-206ENST00000542685 PDCD1Q15116 288 aa6.63□□□□□ -1.35
XRCC4-206ENST00000542685 PPP2R5AQ15172 486 aa6.63□□□□□ -1.35
XRCC4-206ENST00000542685 CDC37Q16543 378 aaPredicted RBP6.63□□□□□ -1.35
XRCC4-206ENST00000542685 ABHD15Q6UXT9 468 aa6.63□□□□□ -1.35
XRCC4-206ENST00000542685 LEKR1Q6ZMV7 388 aa6.63□□□□□ -1.35
XRCC4-206ENST00000542685 RINLQ6ZS11 566 aa6.63□□□□□ -1.35
XRCC4-206ENST00000542685 SKAP1Q86WV1 359 aa6.63□□□□□ -1.35
XRCC4-206ENST00000542685 PROKR1Q8TCW9 393 aa6.63□□□□□ -1.35
XRCC4-206ENST00000542685 LENG9Q96B70 501 aa6.63□□□□□ -1.35
XRCC4-206ENST00000542685 ZBTB9Q96C00 473 aa6.63□□□□□ -1.35
XRCC4-206ENST00000542685 RUNDC1Q96C34 613 aa6.63□□□□□ -1.35
XRCC4-206ENST00000542685 CDC5LQ99459 802 aaKnown RBP6.63□□□□□ -1.35
XRCC4-206ENST00000542685 AGAP2Q99490 1192 aa6.63□□□□□ -1.35
XRCC4-206ENST00000542685 MLST8Q9BVC4 326 aa6.63□□□□□ -1.35
XRCC4-206ENST00000542685 ZNF768Q9H5H4 540 aaKnown RBP6.63□□□□□ -1.35
XRCC4-206ENST00000542685 SPON1Q9HCB6 807 aa6.63□□□□□ -1.35
XRCC4-206ENST00000542685 TOPORSQ9NS56 1045 aaPredicted RBP6.63□□□□□ -1.35
XRCC4-206ENST00000542685 EDARQ9UNE0 448 aa6.63□□□□□ -1.35
XRCC4-206ENST00000542685 FZD1Q9UP38 647 aa6.63□□□□□ -1.35
XRCC4-206ENST00000542685 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.63□□□□□ -1.35
XRCC4-206ENST00000542685 CDY2AQ9Y6F7 541 aa6.63□□□□□ -1.35
XRCC4-206ENST00000542685 CHD1O14646 1710 aa6.62□□□□□ -1.35
XRCC4-206ENST00000542685 COL3A1P02461 1466 aaPredicted RBP6.62□□□□□ -1.35
XRCC4-206ENST00000542685 PIK3R4Q99570 1358 aa6.62□□□□□ -1.35
XRCC4-206ENST00000542685 PRR5-ARHGAP8B1AHC4 643 aa6.62□□□□□ -1.35
XRCC4-206ENST00000542685 NEMP1O14524 444 aa6.62□□□□□ -1.35
XRCC4-206ENST00000542685 APAF1O14727 1248 aa6.62□□□□□ -1.35
XRCC4-206ENST00000542685 TRIM24O15164 1050 aa6.62□□□□□ -1.35
XRCC4-206ENST00000542685 FOXN1O15353 648 aa6.62□□□□□ -1.35
XRCC4-206ENST00000542685 BCAR3O75815 825 aa6.62□□□□□ -1.35
XRCC4-206ENST00000542685 H2AFXP16104 143 aaPredicted RBP6.62□□□□□ -1.35
XRCC4-206ENST00000542685 ACTN2P35609 894 aa6.62□□□□□ -1.35
XRCC4-206ENST00000542685 EIF5P55010 431 aaKnown RBP6.62□□□□□ -1.35
XRCC4-206ENST00000542685 APBA1Q02410 837 aa6.62□□□□□ -1.35
XRCC4-206ENST00000542685 STRN3Q13033 797 aa6.62□□□□□ -1.35
XRCC4-206ENST00000542685 CRYMQ14894 314 aa6.62□□□□□ -1.35
XRCC4-206ENST00000542685 DHCR24Q15392 516 aa6.62□□□□□ -1.35
XRCC4-206ENST00000542685 ZRSR2Q15696 482 aaKnown RBP6.62□□□□□ -1.35
XRCC4-206ENST00000542685 METTL24Q5JXM2 366 aa6.62□□□□□ -1.35
XRCC4-206ENST00000542685 DDX46Q7L014 1031 aaKnown RBP6.62□□□□□ -1.35
XRCC4-206ENST00000542685 DOK3Q7L591 496 aa6.62□□□□□ -1.35
XRCC4-206ENST00000542685 CCDC186Q7Z3E2 898 aa6.62□□□□□ -1.35
XRCC4-206ENST00000542685 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.62□□□□□ -1.35
XRCC4-206ENST00000542685 NOP9Q86U38 636 aaKnown RBP6.62□□□□□ -1.35
XRCC4-206ENST00000542685 VRK3Q8IV63 474 aa6.62□□□□□ -1.35
XRCC4-206ENST00000542685 TEX11Q8IYF3 940 aa6.62□□□□□ -1.35
XRCC4-206ENST00000542685 UBR7Q8N806 425 aa6.62□□□□□ -1.35
XRCC4-206ENST00000542685 EAF2Q96CJ1 260 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms