RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 CLPTM1LQ96KA5 538 aa4.73□□□□□ -1.65
LEMD3-204ENST00000542032 KLHL32Q96NJ5 620 aa4.73□□□□□ -1.65
LEMD3-204ENST00000542032 RIOX1Q9H6W3 641 aa4.73□□□□□ -1.65
LEMD3-204ENST00000542032 TBCCD1Q9NVR7 557 aa4.73□□□□□ -1.65
LEMD3-204ENST00000542032 FOXJ2Q9P0K8 574 aa4.73□□□□□ -1.65
LEMD3-204ENST00000542032 ZNHIT2Q9UHR6 403 aa4.73□□□□□ -1.65
LEMD3-204ENST00000542032 NT5C1B-RDH14C9J2C7 533 aa4.72□□□□□ -1.65
LEMD3-204ENST00000542032 MARCH6O60337 910 aa4.72□□□□□ -1.65
LEMD3-204ENST00000542032 ERBB2P04626 1255 aa4.72□□□□□ -1.65
LEMD3-204ENST00000542032 CD1AP06126 327 aa4.72□□□□□ -1.65
LEMD3-204ENST00000542032 SNAPC2Q13487 334 aa4.72□□□□□ -1.65
LEMD3-204ENST00000542032 ZNF169Q14929 603 aaPredicted RBP4.72□□□□□ -1.65
LEMD3-204ENST00000542032 GEN1Q17RS7 908 aa4.72□□□□□ -1.65
LEMD3-204ENST00000542032 TMEM240Q5SV17 173 aa4.72□□□□□ -1.65
LEMD3-204ENST00000542032 TTC7BQ86TV6 843 aa4.72□□□□□ -1.65
LEMD3-204ENST00000542032 PNMA8AQ86V59 439 aaPredicted RBP4.72□□□□□ -1.65
LEMD3-204ENST00000542032 COLGALT2Q8IYK4 626 aa4.72□□□□□ -1.65
LEMD3-204ENST00000542032 PRR18Q8N4B5 295 aa4.72□□□□□ -1.65
LEMD3-204ENST00000542032 SLC44A3Q8N4M1 653 aa4.72□□□□□ -1.65
LEMD3-204ENST00000542032 PDLIM2Q96JY6 352 aa4.72□□□□□ -1.65
LEMD3-204ENST00000542032 SIDT1Q9NXL6 827 aaKnown RBP4.72□□□□□ -1.65
LEMD3-204ENST00000542032 KCTD5Q9NXV2 234 aa4.72□□□□□ -1.65
LEMD3-204ENST00000542032 TESQ9UGI8 421 aaKnown RBP4.72□□□□□ -1.65
LEMD3-204ENST00000542032 MTO1Q9Y2Z2 717 aaKnown RBP4.72□□□□□ -1.65
LEMD3-204ENST00000542032 COX11Q9Y6N1 276 aa4.72□□□□□ -1.65
LEMD3-204ENST00000542032 PRAMEF33A0A0G2JMD5 474 aa4.71□□□□□ -1.66
LEMD3-204ENST00000542032 PROM1O43490 865 aa4.71□□□□□ -1.66
LEMD3-204ENST00000542032 PRAMEF10O60809 474 aa4.71□□□□□ -1.66
LEMD3-204ENST00000542032 RPLP2P05387 115 aaKnown RBP4.71□□□□□ -1.66
LEMD3-204ENST00000542032 SRGNP10124 158 aa4.71□□□□□ -1.66
LEMD3-204ENST00000542032 KCNA2P16389 499 aa4.71□□□□□ -1.66
LEMD3-204ENST00000542032 MALP21145 153 aa4.71□□□□□ -1.66
LEMD3-204ENST00000542032 CXCR5P32302 372 aa4.71□□□□□ -1.66
LEMD3-204ENST00000542032 POU6F2P78424 691 aaPredicted RBP4.71□□□□□ -1.66
LEMD3-204ENST00000542032 SIM1P81133 766 aaPredicted RBP4.71□□□□□ -1.66
LEMD3-204ENST00000542032 ZNF362Q5T0B9 420 aaPredicted RBP4.71□□□□□ -1.66
LEMD3-204ENST00000542032 PDSS2Q86YH6 399 aa4.71□□□□□ -1.66
LEMD3-204ENST00000542032 TMIEQ8NEW7 156 aa4.71□□□□□ -1.66
LEMD3-204ENST00000542032 SSH3Q8TE77 659 aa4.71□□□□□ -1.66
LEMD3-204ENST00000542032 PTCD3Q96EY7 689 aaKnown RBP4.71□□□□□ -1.66
LEMD3-204ENST00000542032 ZNF764Q96H86 408 aaPredicted RBP4.71□□□□□ -1.66
LEMD3-204ENST00000542032 LRIG1Q96JA1 1093 aa4.71□□□□□ -1.66
LEMD3-204ENST00000542032 PACSIN1Q9BY11 444 aa4.71□□□□□ -1.66
LEMD3-204ENST00000542032 R3HDMLQ9H3Y0 253 aa4.71□□□□□ -1.66
LEMD3-204ENST00000542032 SLC45A2Q9UMX9 530 aa4.71□□□□□ -1.66
LEMD3-204ENST00000542032 NEU2Q9Y3R4 380 aa4.71□□□□□ -1.66
LEMD3-204ENST00000542032 PRSS29PA6NIE9 313 aa4.7□□□□□ -1.66
LEMD3-204ENST00000542032 E7ENX8 843 aa4.7□□□□□ -1.66
LEMD3-204ENST00000542032 E9PLN8 166 aa4.7□□□□□ -1.66
LEMD3-204ENST00000542032 F2RL2O00254 374 aa4.7□□□□□ -1.66
LEMD3-204ENST00000542032 MGST3O14880 152 aa4.7□□□□□ -1.66
LEMD3-204ENST00000542032 SUN1O94901 812 aa4.7□□□□□ -1.66
LEMD3-204ENST00000542032 ANXA1P04083 346 aa4.7□□□□□ -1.66
LEMD3-204ENST00000542032 ITGB6P18564 788 aa4.7□□□□□ -1.66
LEMD3-204ENST00000542032 PLA2G5P39877 138 aa4.7□□□□□ -1.66
LEMD3-204ENST00000542032 RECQLP46063 649 aaPredicted RBP4.7□□□□□ -1.66
LEMD3-204ENST00000542032 RARRES1P49788 294 aa4.7□□□□□ -1.66
LEMD3-204ENST00000542032 TAP2Q03519 686 aa4.7□□□□□ -1.66
LEMD3-204ENST00000542032 UAP1L1Q3KQV9 507 aa4.7□□□□□ -1.66
LEMD3-204ENST00000542032 KHDC1Q4VXA5 237 aaKnown RBP4.7□□□□□ -1.66
LEMD3-204ENST00000542032 BRDTQ58F21 947 aaPredicted RBP4.7□□□□□ -1.66
LEMD3-204ENST00000542032 STRIP1Q5VSL9 837 aa4.7□□□□□ -1.66
LEMD3-204ENST00000542032 VWA1Q6PCB0 445 aa4.7□□□□□ -1.66
LEMD3-204ENST00000542032 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.7□□□□□ -1.66
LEMD3-204ENST00000542032 GADL1Q6ZQY3 521 aa4.7□□□□□ -1.66
LEMD3-204ENST00000542032 ADGRG3Q86Y34 549 aa4.7□□□□□ -1.66
LEMD3-204ENST00000542032 CFAP52Q8N1V2 620 aa4.7□□□□□ -1.66
LEMD3-204ENST00000542032 ZCRB1Q8TBF4 217 aaKnown RBP4.7□□□□□ -1.66
LEMD3-204ENST00000542032 VKORC1Q9BQB6 163 aa4.7□□□□□ -1.66
LEMD3-204ENST00000542032 AIFM2Q9BRQ8 373 aa4.7□□□□□ -1.66
LEMD3-204ENST00000542032 TCF7L1Q9HCS4 588 aa4.7□□□□□ -1.66
LEMD3-204ENST00000542032 CASS4Q9NQ75 786 aa4.7□□□□□ -1.66
LEMD3-204ENST00000542032 INSL6Q9Y581 213 aa4.7□□□□□ -1.66
LEMD3-204ENST00000542032 PDCP20941 246 aa4.69□□□□□ -1.66
LEMD3-204ENST00000542032 LPOP22079 712 aaPredicted RBP4.69□□□□□ -1.66
LEMD3-204ENST00000542032 GATA3P23771 443 aa4.69□□□□□ -1.66
LEMD3-204ENST00000542032 CYP2C19P33261 490 aa4.69□□□□□ -1.66
LEMD3-204ENST00000542032 KRTAP10-6P60371 365 aaPredicted RBP4.69□□□□□ -1.66
LEMD3-204ENST00000542032 RPS7P62081 194 aaKnown RBP4.69□□□□□ -1.66
LEMD3-204ENST00000542032 TCF15Q12870 199 aa4.69□□□□□ -1.66
LEMD3-204ENST00000542032 DYRK1AQ13627 763 aa4.69□□□□□ -1.66
LEMD3-204ENST00000542032 PTPROQ16827 1216 aa4.69□□□□□ -1.66
LEMD3-204ENST00000542032 ERCC6LQ2NKX8 1250 aa4.69□□□□□ -1.66
LEMD3-204ENST00000542032 SLC4A10Q6U841 1118 aa4.69□□□□□ -1.66
LEMD3-204ENST00000542032 CLNKQ7Z7G1 428 aa4.69□□□□□ -1.66
LEMD3-204ENST00000542032 FAM90A1Q86YD7 464 aa4.69□□□□□ -1.66
LEMD3-204ENST00000542032 CPA6Q8N4T0 437 aa4.69□□□□□ -1.66
LEMD3-204ENST00000542032 VRK1Q99986 396 aaPredicted RBP4.69□□□□□ -1.66
LEMD3-204ENST00000542032 MAN1C1Q9NR34 630 aa4.69□□□□□ -1.66
LEMD3-204ENST00000542032 INTS13Q9NVM9 706 aa4.69□□□□□ -1.66
LEMD3-204ENST00000542032 RLIMQ9NVW2 624 aa4.69□□□□□ -1.66
LEMD3-204ENST00000542032 TRGV11A0A075B6L2 103 aa4.68□□□□□ -1.66
LEMD3-204ENST00000542032 CCDC195A0A1B0GUA6 201 aa4.68□□□□□ -1.66
LEMD3-204ENST00000542032 SLC16A6O15403 523 aa4.68□□□□□ -1.66
LEMD3-204ENST00000542032 POU2F2P09086 479 aa4.68□□□□□ -1.66
LEMD3-204ENST00000542032 FTH1P19P0C7X4 201 aa4.68□□□□□ -1.66
LEMD3-204ENST00000542032 PRDX5P30044 214 aa4.68□□□□□ -1.66
LEMD3-204ENST00000542032 FOLR3P41439 243 aa4.68□□□□□ -1.66
LEMD3-204ENST00000542032 ANXA11P50995 505 aaKnown RBP4.68□□□□□ -1.66
LEMD3-204ENST00000542032 ZNF844Q08AG5 666 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms