RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 YME1L1Q96TA2 773 aa29.85■■■□□ 2.37
CCM2-218ENST00000541586 HAUS4Q9H6D7 363 aa29.85■■■□□ 2.37
CCM2-218ENST00000541586 A0A0U1RQJ8 604 aa29.84■■■□□ 2.37
CCM2-218ENST00000541586 ARL5CA6NH57 179 aa29.84■■■□□ 2.37
CCM2-218ENST00000541586 TBKBP1A7MCY6 615 aa29.84■■■□□ 2.37
CCM2-218ENST00000541586 LACTBL1A8MY62 500 aa29.84■■■□□ 2.37
CCM2-218ENST00000541586 FOXN3O00409 490 aaPredicted RBP29.84■■■□□ 2.37
CCM2-218ENST00000541586 PHACTR2O75167 634 aa29.84■■■□□ 2.37
CCM2-218ENST00000541586 OFD1O75665 1012 aa29.84■■■□□ 2.37
CCM2-218ENST00000541586 DGKIO75912 1065 aa29.84■■■□□ 2.37
CCM2-218ENST00000541586 GJB5O95377 273 aa29.84■■■□□ 2.37
CCM2-218ENST00000541586 FERP16591 822 aa29.84■■■□□ 2.37
CCM2-218ENST00000541586 TFAMQ00059 246 aaKnown RBP29.84■■■□□ 2.37
CCM2-218ENST00000541586 PTPN14Q15678 1187 aa29.84■■■□□ 2.37
CCM2-218ENST00000541586 SLC10A6Q3KNW5 377 aa29.84■■■□□ 2.37
CCM2-218ENST00000541586 FAM109BQ6ICB4 259 aaPredicted RBP29.84■■■□□ 2.37
CCM2-218ENST00000541586 TRAPPC11Q7Z392 1133 aa29.84■■■□□ 2.37
CCM2-218ENST00000541586 ATRIPQ8WXE1 791 aa29.84■■■□□ 2.37
CCM2-218ENST00000541586 TATDN2Q93075 761 aa29.84■■■□□ 2.37
CCM2-218ENST00000541586 BZW2Q9Y6E2 419 aaKnown RBP29.84■■■□□ 2.37
CCM2-218ENST00000541586 GOLGA6L9A6NEM1 432 aa29.83■■■□□ 2.37
CCM2-218ENST00000541586 AKR1B10O60218 316 aa29.83■■■□□ 2.37
CCM2-218ENST00000541586 RABGGTBP53611 331 aa29.83■■■□□ 2.37
CCM2-218ENST00000541586 MFAP3P55082 362 aa29.83■■■□□ 2.37
CCM2-218ENST00000541586 WDR44Q5JSH3 913 aa29.83■■■□□ 2.37
CCM2-218ENST00000541586 RPS6KC1Q96S38 1066 aa29.83■■■□□ 2.37
CCM2-218ENST00000541586 ZNF263O14978 683 aa29.82■■■□□ 2.36
CCM2-218ENST00000541586 HOXA2O43364 376 aa29.82■■■□□ 2.36
CCM2-218ENST00000541586 TLL1O43897 1013 aa29.82■■■□□ 2.36
CCM2-218ENST00000541586 IPO7O95373 1038 aaKnown RBP29.82■■■□□ 2.36
CCM2-218ENST00000541586 POMCP01189 267 aa29.82■■■□□ 2.36
CCM2-218ENST00000541586 TMEM191BP0C7N4 346 aa29.82■■■□□ 2.36
CCM2-218ENST00000541586 KRT83P78385 493 aa29.82■■■□□ 2.36
CCM2-218ENST00000541586 PTK2Q05397 1052 aa29.82■■■□□ 2.36
CCM2-218ENST00000541586 NCOA4Q13772 614 aa29.82■■■□□ 2.36
CCM2-218ENST00000541586 FMNL3Q8IVF7 1028 aa29.82■■■□□ 2.36
CCM2-218ENST00000541586 ASB7Q9H672 318 aa29.82■■■□□ 2.36
CCM2-218ENST00000541586 MIOSQ9NXC5 875 aa29.82■■■□□ 2.36
CCM2-218ENST00000541586 LCA5LO95447 670 aa29.82■■■□□ 2.36
CCM2-218ENST00000541586 CYP27A1Q02318 531 aa29.82■■■□□ 2.36
CCM2-218ENST00000541586 GLRA4Q5JXX5 417 aa29.82■■■□□ 2.36
CCM2-218ENST00000541586 DNTTIP2Q5QJE6 756 aaKnown RBP29.82■■■□□ 2.36
CCM2-218ENST00000541586 SCARA3Q6AZY7 606 aa29.82■■■□□ 2.36
CCM2-218ENST00000541586 ANKRD36BP1Q96IX9 119 aa29.82■■■□□ 2.36
CCM2-218ENST00000541586 CASD1Q96PB1 797 aa29.82■■■□□ 2.36
CCM2-218ENST00000541586 NFICP08651 508 aa29.81■■■□□ 2.36
CCM2-218ENST00000541586 SCNN1GP51170 649 aa29.81■■■□□ 2.36
CCM2-218ENST00000541586 GCNT1Q02742 428 aa29.81■■■□□ 2.36
CCM2-218ENST00000541586 JADE1Q6IE81 842 aa29.81■■■□□ 2.36
CCM2-218ENST00000541586 ZNF571Q7Z3V5 609 aaPredicted RBP29.81■■■□□ 2.36
CCM2-218ENST00000541586 COLQQ9Y215 455 aaPredicted RBP29.81■■■□□ 2.36
CCM2-218ENST00000541586 CST3P01034 146 aaPredicted RBP29.8■■■□□ 2.36
CCM2-218ENST00000541586 TNNC2P02585 160 aa29.8■■■□□ 2.36
CCM2-218ENST00000541586 TNNT1P13805 278 aa29.8■■■□□ 2.36
CCM2-218ENST00000541586 GFPT1Q06210 699 aaPredicted RBP29.8■■■□□ 2.36
CCM2-218ENST00000541586 SPA17Q15506 151 aa29.8■■■□□ 2.36
CCM2-218ENST00000541586 NOMO2Q5JPE7 1267 aa29.8■■■□□ 2.36
CCM2-218ENST00000541586 SPOPLQ6IQ16 392 aa29.8■■■□□ 2.36
CCM2-218ENST00000541586 SNX27Q96L92 541 aa29.8■■■□□ 2.36
CCM2-218ENST00000541586 PRO3102Q9H379 93 aa29.8■■■□□ 2.36
CCM2-218ENST00000541586 LZTFL1Q9NQ48 299 aa29.8■■■□□ 2.36
CCM2-218ENST00000541586 INSL6Q9Y581 213 aa29.8■■■□□ 2.36
CCM2-218ENST00000541586 ALKAL1Q6UXT8 129 aa29.79■■■□□ 2.36
CCM2-218ENST00000541586 URGCPQ8TCY9 931 aa29.79■■■□□ 2.36
CCM2-218ENST00000541586 SHC3Q92529 594 aa29.79■■■□□ 2.36
CCM2-218ENST00000541586 RAD9AQ99638 391 aa29.79■■■□□ 2.36
CCM2-218ENST00000541586 APOBEC3GQ9HC16 384 aaKnown RBP29.79■■■□□ 2.36
CCM2-218ENST00000541586 CCDC172P0C7W6 258 aa29.79■■■□□ 2.36
CCM2-218ENST00000541586 RNASELQ05823 741 aaKnown RBP29.79■■■□□ 2.36
CCM2-218ENST00000541586 BTG3Q14201 252 aaPredicted RBP29.79■■■□□ 2.36
CCM2-218ENST00000541586 ENOSF1Q7L5Y1 443 aa29.79■■■□□ 2.36
CCM2-218ENST00000541586 GSTCDQ8NEC7 633 aa29.79■■■□□ 2.36
CCM2-218ENST00000541586 ZNF689Q96CS4 500 aaPredicted RBP29.79■■■□□ 2.36
CCM2-218ENST00000541586 FAM81BQ96LP2 452 aa29.79■■■□□ 2.36
CCM2-218ENST00000541586 PLEKHA5Q9HAU0 1116 aa29.79■■■□□ 2.36
CCM2-218ENST00000541586 PTPRSQ13332 1948 aa29.78■■■□□ 2.36
CCM2-218ENST00000541586 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.78■■■□□ 2.36
CCM2-218ENST00000541586 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.78■■■□□ 2.36
CCM2-218ENST00000541586 MYOGP15173 224 aa29.78■■■□□ 2.36
CCM2-218ENST00000541586 NOP14P78316 857 aaKnown RBP29.78■■■□□ 2.36
CCM2-218ENST00000541586 FAM71AQ8IYT1 594 aa29.78■■■□□ 2.36
CCM2-218ENST00000541586 ZMAT2Q96NC0 199 aaKnown RBP29.78■■■□□ 2.36
CCM2-218ENST00000541586 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP29.78■■■□□ 2.36
CCM2-218ENST00000541586 ADAMTS1Q9UHI8 967 aa29.78■■■□□ 2.36
CCM2-218ENST00000541586 SMIM28A0A1B0GU29 152 aa29.77■■■□□ 2.36
CCM2-218ENST00000541586 THP07101 528 aa29.77■■■□□ 2.36
CCM2-218ENST00000541586 SLC18A3Q16572 532 aa29.77■■■□□ 2.36
CCM2-218ENST00000541586 KIF12Q96FN5 646 aa29.77■■■□□ 2.36
CCM2-218ENST00000541586 IMPG2Q9BZV3 1241 aa29.77■■■□□ 2.36
CCM2-218ENST00000541586 A0A087X0T9 212 aa29.76■■■□□ 2.36
CCM2-218ENST00000541586 PTGESO14684 152 aa29.76■■■□□ 2.36
CCM2-218ENST00000541586 ASS1P00966 412 aaKnown RBP29.76■■■□□ 2.36
CCM2-218ENST00000541586 FAM228BP0C875 321 aa29.76■■■□□ 2.36
CCM2-218ENST00000541586 ARHGAP25P42331 645 aa29.76■■■□□ 2.36
CCM2-218ENST00000541586 MYL6P60660 151 aa29.76■■■□□ 2.36
CCM2-218ENST00000541586 TRPC3Q13507 836 aa29.76■■■□□ 2.36
CCM2-218ENST00000541586 PRPF38BQ5VTL8 546 aaKnown RBP29.76■■■□□ 2.36
CCM2-218ENST00000541586 KIAA1328Q86T90 577 aa29.76■■■□□ 2.36
CCM2-218ENST00000541586 CD302Q8IX05 232 aa29.76■■■□□ 2.36
CCM2-218ENST00000541586 ARID3AQ99856 593 aa29.76■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms