RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 SPIRE2Q8WWL2 714 aa15.25■□□□□ 0.03
SFSWAP-210ENST00000541286 STK33Q9BYT3 514 aa15.25■□□□□ 0.03
SFSWAP-210ENST00000541286 PIDD1Q9HB75 910 aa15.25■□□□□ 0.03
SFSWAP-210ENST00000541286 TBC1D22BQ9NU19 505 aa15.25■□□□□ 0.03
SFSWAP-210ENST00000541286 COG5Q9UP83 839 aa15.25■□□□□ 0.03
SFSWAP-210ENST00000541286 GINS2Q9Y248 185 aa15.25■□□□□ 0.03
SFSWAP-210ENST00000541286 WDR81Q562E7 1941 aa15.25■□□□□ 0.03
SFSWAP-210ENST00000541286 LRRC37A2A6NM11 1700 aa15.25■□□□□ 0.03
SFSWAP-210ENST00000541286 ATXN2Q99700 1313 aaKnown RBP15.25■□□□□ 0.03
SFSWAP-210ENST00000541286 CALRP27797 417 aaKnown RBP15.24■□□□□ 0.03
SFSWAP-210ENST00000541286 PRKCIP41743 596 aa15.24■□□□□ 0.03
SFSWAP-210ENST00000541286 MTMR3Q13615 1198 aa15.24■□□□□ 0.03
SFSWAP-210ENST00000541286 HIC1Q14526 733 aa15.24■□□□□ 0.03
SFSWAP-210ENST00000541286 TRIP13Q15645 432 aaPredicted RBP15.24■□□□□ 0.03
SFSWAP-210ENST00000541286 CXCL17Q6UXB2 119 aa15.24■□□□□ 0.03
SFSWAP-210ENST00000541286 ABHD16BQ9H3Z7 469 aa15.24■□□□□ 0.03
SFSWAP-210ENST00000541286 SRRDQ9UH36 339 aa15.24■□□□□ 0.03
SFSWAP-210ENST00000541286 PRUNE2Q8WUY3 3088 aa15.24■□□□□ 0.03
SFSWAP-210ENST00000541286 H0Y3Z8 333 aa15.24■□□□□ 0.03
SFSWAP-210ENST00000541286 HIP1RO75146 1068 aa15.24■□□□□ 0.03
SFSWAP-210ENST00000541286 JAM2P57087 298 aa15.24■□□□□ 0.03
SFSWAP-210ENST00000541286 DENND2CQ68D51 928 aa15.24■□□□□ 0.03
SFSWAP-210ENST00000541286 TLK2Q86UE8 772 aa15.24■□□□□ 0.03
SFSWAP-210ENST00000541286 RPUSD2Q8IZ73 545 aaKnown RBP15.24■□□□□ 0.03
SFSWAP-210ENST00000541286 XPO6Q96QU8 1125 aaKnown RBP15.24■□□□□ 0.03
SFSWAP-210ENST00000541286 AZI2Q9H6S1 392 aa15.24■□□□□ 0.03
SFSWAP-210ENST00000541286 APEX2Q9UBZ4 518 aa15.24■□□□□ 0.03
SFSWAP-210ENST00000541286 DBR1Q9UK59 544 aaKnown RBP15.24■□□□□ 0.03
SFSWAP-210ENST00000541286 SLC29A2Q14542 456 aa15.24■□□□□ 0.03
SFSWAP-210ENST00000541286 METTL7BQ6UX53 244 aa15.24■□□□□ 0.03
SFSWAP-210ENST00000541286 CD302Q8IX05 232 aa15.24■□□□□ 0.03
SFSWAP-210ENST00000541286 CEP170P1Q96L14 293 aa15.24■□□□□ 0.03
SFSWAP-210ENST00000541286 CBWD1Q9BRT8 395 aa15.24■□□□□ 0.03
SFSWAP-210ENST00000541286 RAB17Q9H0T7 212 aa15.24■□□□□ 0.03
SFSWAP-210ENST00000541286 ZNF302Q9NR11 478 aa15.24■□□□□ 0.03
SFSWAP-210ENST00000541286 FAM114A2Q9NRY5 505 aa15.24■□□□□ 0.03
SFSWAP-210ENST00000541286 SUPT20HL2P0C7V6 817 aa15.23■□□□□ 0.03
SFSWAP-210ENST00000541286 GJC1P36383 396 aa15.23■□□□□ 0.03
SFSWAP-210ENST00000541286 EPC2Q52LR7 807 aa15.23■□□□□ 0.03
SFSWAP-210ENST00000541286 C2CD6Q53TS8 623 aa15.23■□□□□ 0.03
SFSWAP-210ENST00000541286 ZNF720Q7Z2F6 126 aa15.23■□□□□ 0.03
SFSWAP-210ENST00000541286 JAMLQ86YT9 394 aa15.23■□□□□ 0.03
SFSWAP-210ENST00000541286 ABRAQ8N0Z2 381 aa15.23■□□□□ 0.03
SFSWAP-210ENST00000541286 HES6Q96HZ4 224 aa15.23■□□□□ 0.03
SFSWAP-210ENST00000541286 SLITRK6Q9H5Y7 841 aa15.23■□□□□ 0.03
SFSWAP-210ENST00000541286 WBP1LQ9NX94 342 aa15.23■□□□□ 0.03
SFSWAP-210ENST00000541286 A0A1B0GVG6 124 aa15.23■□□□□ 0.03
SFSWAP-210ENST00000541286 RGS16O15492 202 aaPredicted RBP15.23■□□□□ 0.03
SFSWAP-210ENST00000541286 FKTNO75072 461 aa15.23■□□□□ 0.03
SFSWAP-210ENST00000541286 STBD1O95210 358 aa15.23■□□□□ 0.03
SFSWAP-210ENST00000541286 P4HBP07237 508 aaKnown RBP15.23■□□□□ 0.03
SFSWAP-210ENST00000541286 KRT16P08779 473 aa15.23■□□□□ 0.03
SFSWAP-210ENST00000541286 GAP43P17677 238 aa15.23■□□□□ 0.03
SFSWAP-210ENST00000541286 STAT5BP51692 787 aa15.23■□□□□ 0.03
SFSWAP-210ENST00000541286 KIF22Q14807 665 aa15.23■□□□□ 0.03
SFSWAP-210ENST00000541286 C1orf186Q6ZWK4 172 aa15.23■□□□□ 0.03
SFSWAP-210ENST00000541286 ARHGEF19Q8IW93 802 aa15.23■□□□□ 0.03
SFSWAP-210ENST00000541286 HOMEZQ8IX15 550 aa15.23■□□□□ 0.03
SFSWAP-210ENST00000541286 ANKS4BQ8N8V4 417 aa15.23■□□□□ 0.03
SFSWAP-210ENST00000541286 DYDC1Q8WWB3 177 aa15.23■□□□□ 0.03
SFSWAP-210ENST00000541286 SEMA4AQ9H3S1 761 aa15.23■□□□□ 0.03
SFSWAP-210ENST00000541286 SLC16A3O15427 465 aaKnown RBP15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 RARRES1P49788 294 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 PADI6Q6TGC4 694 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 CDR2LQ86X02 465 aaPredicted RBP15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 DAW1Q8N136 415 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 SLC30A5Q8TAD4 765 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 POP1Q99575 1024 aaKnown RBP15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 ECT2Q9H8V3 914 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 XIRP2A4UGR9 3374 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 TCRBV7S2A1N4TA0A589 114 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 MYL3P08590 195 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 ICAM3P32942 547 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 PMS2P54278 862 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 KRT76Q01546 638 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 FAM102BQ5T8I3 360 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 MIS18BP1Q6P0N0 1132 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 FOXR2Q6PJQ5 311 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 LRIG3Q6UXM1 1119 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 STXBP4Q6ZWJ1 553 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 BSNDQ8WZ55 320 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 AGPAT1Q99943 283 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 FAM118BQ9BPY3 351 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 ERP44Q9BS26 406 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 ZMYM2Q9UBW7 1377 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 CYP26A1O43174 497 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 INHAP05111 366 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 TMEM253P0C7T8 217 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 SSTR3P32745 418 aaPredicted RBP15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 SSR1P43307 286 aaKnown RBP15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 CETN1Q12798 172 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 BFSP1Q12934 665 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 BIRC3Q13489 604 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 GNASQ5JWF2 1037 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 ZFYVE27Q5T4F4 411 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 NIPA1Q7RTP0 329 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 EPS8L3Q8TE67 593 aaKnown RBP15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 SETD4Q9NVD3 440 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 SAMD15Q9P1V8 674 aa15.22■□□□□ 0.03
SFSWAP-210ENST00000541286 ZMYND8Q9ULU4 1186 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms