RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 FUKQ8N0W3 1084 aa15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 DAGLBQ8NCG7 672 aa15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 RMDN2Q96LZ7 410 aa15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 TAGLN3Q9UI15 199 aa15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 ITGB1BP2Q9UKP3 347 aa15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 PSTPIP1O43586 416 aa15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 H2AFYO75367 372 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 WDR47O94967 919 aa15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 XPAP23025 273 aaPredicted RBP15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 BTKQ06187 659 aa15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 HORMAD1Q86X24 394 aa15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 APBB2Q92870 758 aa15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 C18orf8Q96DM3 657 aa15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 CNBD2Q96M20 576 aa15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 SLC24A2Q9UI40 661 aa15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 TFR2Q9UP52 801 aa15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 CD44P16070 742 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 PSMC3P17980 439 aa15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 DUOXA2Q1HG44 320 aa15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 MRPL4Q9BYD3 311 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 CAAP1Q9H8G2 361 aa15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 RSAD1Q9HA92 442 aa15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 CNTNAP5Q8WYK1 1306 aa15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 PLEKP08567 350 aaPredicted RBP15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 RAP1GDS1P52306 607 aa15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 STX5Q13190 355 aa15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 KYAT1Q16773 422 aa15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 FAM98CQ17RN3 349 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 ZNF568Q3ZCX4 644 aa15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 C12orf60Q5U649 245 aa15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 ANGPTL8Q6UXH0 198 aa15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 ZKSCAN4Q969J2 545 aaPredicted RBP15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 LACRTQ9GZZ8 138 aa15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 TOPORSQ9NS56 1045 aaPredicted RBP15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 SCN3BQ9NY72 215 aa15.68■□□□□ 0.1
SMARCA4-207ENST00000541122 A0A087X0T9 212 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 NEMP1O14524 444 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 APRTP07741 180 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 FAM228BP0C875 321 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 THRAP10827 490 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 PAX7P23759 505 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 SLC34A1Q06495 639 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 AGR3Q8TD06 166 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 IFT43Q96FT9 208 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 LBHD1Q9BQE6 289 aaPredicted RBP15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 ZNF446Q9NWS9 450 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 MINPP1Q9UNW1 487 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 TRPC5OSA6NMA1 111 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 TNFRSF8P28908 595 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 PHKA2P46019 1235 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 KCNJ1P48048 391 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 CCDC15Q0P6D6 951 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 TRAPPC9Q96Q05 1148 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 SLAIN2Q9P270 581 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 USP31Q70CQ4 1352 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 TM9SF1O15321 606 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 ZCCHC18P0CG32 403 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 CPA2P48052 419 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 IZUMO2Q6UXV1 221 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 PID1Q7Z2X4 250 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 NDUFAF2Q8N183 169 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 ETAA1Q9NY74 926 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 PMS1P54277 932 aaKnown RBP15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 CCNA1P78396 465 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 TTI2Q6NXR4 508 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 PPHLN1Q8NEY8 458 aaKnown RBP15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 SLC30A5Q8TAD4 765 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 ZFRQ96KR1 1074 aaKnown RBP15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 NLRP4Q96MN2 994 aa15.67■□□□□ 0.1
SMARCA4-207ENST00000541122 NPHP3-ACAD11A0A0J9YXS1 232 aa15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 GLI1P08151 1106 aa15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 NFKBIAP25963 317 aa15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 RC3H1Q5TC82 1133 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 NLGN1Q8N2Q7 840 aa15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 PGBD4Q96DM1 585 aa15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 HERC5Q9UII4 1024 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 ATP5BP06576 529 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 PRKG1Q13976 671 aa15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 HLFQ16534 295 aa15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 EAPPQ56P03 285 aaPredicted RBP15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 GADL1Q6ZQY3 521 aa15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 MIGA2Q7L4E1 593 aa15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 B4GALNT2Q8NHY0 566 aa15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 CENPTQ96BT3 561 aa15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 MIEF2Q96C03 454 aa15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 PPP1R2P1Q96PQ5 205 aa15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 TRIM62Q9BVG3 475 aa15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 POLR3FQ9H1D9 316 aaPredicted RBP15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 GDF3Q9NR23 364 aa15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 ABCA6Q8N139 1617 aa15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 PJA2O43164 708 aa15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 TRAPPC3O43617 180 aa15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 KCNA2P16389 499 aa15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 SESN2P58004 480 aaPredicted RBP15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 ZC3H12BQ5HYM0 836 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 CD302Q8IX05 232 aa15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 SLC44A5Q8NCS7 719 aa15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 LRRN4CLQ8ND94 238 aa15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 SH3GL2Q99962 352 aa15.66■□□□□ 0.1
SMARCA4-207ENST00000541122 RUBCNLQ9H714 662 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms