RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 ENOSF1Q7L5Y1 443 aa13.39□□□□□ -0.27
SMAD3-204ENST00000540846 APBB1IPQ7Z5R6 666 aaPredicted RBP13.39□□□□□ -0.27
SMAD3-204ENST00000540846 EFCAB13Q8IY85 973 aa13.39□□□□□ -0.27
SMAD3-204ENST00000540846 PPM1KQ8N3J5 372 aa13.39□□□□□ -0.27
SMAD3-204ENST00000540846 CEP112Q8N8E3 955 aa13.39□□□□□ -0.27
SMAD3-204ENST00000540846 APBB2Q92870 758 aa13.39□□□□□ -0.27
SMAD3-204ENST00000540846 KAT5Q92993 513 aa13.39□□□□□ -0.27
SMAD3-204ENST00000540846 FAM81BQ96LP2 452 aa13.39□□□□□ -0.27
SMAD3-204ENST00000540846 FTHL17Q9BXU8 183 aa13.39□□□□□ -0.27
SMAD3-204ENST00000540846 FNDC1Q4ZHG4 1894 aaPredicted RBP13.39□□□□□ -0.27
SMAD3-204ENST00000540846 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-204ENST00000540846 LACTBL1A8MY62 500 aa13.38□□□□□ -0.27
SMAD3-204ENST00000540846 ENC1O14682 589 aa13.38□□□□□ -0.27
SMAD3-204ENST00000540846 C4BPAP04003 597 aaKnown RBP13.38□□□□□ -0.27
SMAD3-204ENST00000540846 RAG1P15918 1043 aa13.38□□□□□ -0.27
SMAD3-204ENST00000540846 ZSCAN20P17040 1043 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-204ENST00000540846 AKAP5P24588 427 aa13.38□□□□□ -0.27
SMAD3-204ENST00000540846 RAB27AP51159 221 aa13.38□□□□□ -0.27
SMAD3-204ENST00000540846 ELF2Q15723 593 aa13.38□□□□□ -0.27
SMAD3-204ENST00000540846 TDRD10Q5VZ19 366 aaKnown RBP13.38□□□□□ -0.27
SMAD3-204ENST00000540846 AGMOQ6ZNB7 445 aa13.38□□□□□ -0.27
SMAD3-204ENST00000540846 RSRC2Q7L4I2 434 aaKnown RBP13.38□□□□□ -0.27
SMAD3-204ENST00000540846 DEFB128Q7Z7B8 93 aa13.38□□□□□ -0.27
SMAD3-204ENST00000540846 ECHDC2Q86YB7 292 aa13.38□□□□□ -0.27
SMAD3-204ENST00000540846 GLYCTKQ8IVS8 523 aa13.38□□□□□ -0.27
SMAD3-204ENST00000540846 C7orf61Q8IZ16 206 aa13.38□□□□□ -0.27
SMAD3-204ENST00000540846 GSTCDQ8NEC7 633 aa13.38□□□□□ -0.27
SMAD3-204ENST00000540846 SEPT8Q92599 483 aa13.38□□□□□ -0.27
SMAD3-204ENST00000540846 ACAP3Q96P50 834 aa13.38□□□□□ -0.27
SMAD3-204ENST00000540846 CCDC94Q9BW85 323 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-204ENST00000540846 TRIM6Q9C030 488 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-204ENST00000540846 RPF1Q9H9Y2 349 aaKnown RBP13.38□□□□□ -0.27
SMAD3-204ENST00000540846 C1orf112Q9NSG2 853 aa13.38□□□□□ -0.27
SMAD3-204ENST00000540846 CNTN3Q9P232 1028 aa13.38□□□□□ -0.27
SMAD3-204ENST00000540846 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.38□□□□□ -0.27
SMAD3-204ENST00000540846 NOCTQ9UK39 431 aaKnown RBP13.38□□□□□ -0.27
SMAD3-204ENST00000540846 PCDHGC5Q9Y5F6 944 aa13.38□□□□□ -0.27
SMAD3-204ENST00000540846 SAR1BQ9Y6B6 198 aa13.38□□□□□ -0.27
SMAD3-204ENST00000540846 V9GYY5 206 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-204ENST00000540846 NCANO14594 1321 aa13.38□□□□□ -0.27
SMAD3-204ENST00000540846 A0A0A6YYK5 440 aaPredicted RBP13.37□□□□□ -0.27
SMAD3-204ENST00000540846 CCDC85CA6NKD9 419 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 ENPP3O14638 875 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 IL18RAPO95256 599 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 VNN1O95497 513 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 HLA-DRAP01903 254 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 NFICP08651 508 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 H2AFZP0C0S5 128 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 TNNI1P19237 187 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 AP3M2P53677 418 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 ZBTB6Q15916 424 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 ERCC6LQ2NKX8 1250 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 LMBRD2Q68DH5 695 aaPredicted RBP13.37□□□□□ -0.27
SMAD3-204ENST00000540846 SCARA3Q6AZY7 606 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 CNKSR3Q6P9H4 555 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 SLC24A5Q71RS6 500 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 H2AFVQ71UI9 128 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 WDR49Q8IV35 697 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 TNS4Q8IZW8 715 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 OR5B17Q8NGF7 314 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 CXorf38Q8TB03 319 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 UBXN4Q92575 508 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 LPPQ93052 612 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 ZMAT2Q96NC0 199 aaKnown RBP13.37□□□□□ -0.27
SMAD3-204ENST00000540846 AGPAT1Q99943 283 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 ASB7Q9H672 318 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 PLEKHA5Q9HAU0 1116 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 RNF19AQ9NV58 838 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 PTGESO14684 152 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 INPPL1O15357 1258 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 BUB1O43683 1085 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 PRLRP16471 622 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 PIK3CAP42336 1068 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 AFF1P51825 1210 aaKnown RBP13.37□□□□□ -0.27
SMAD3-204ENST00000540846 SURF1Q15526 300 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 JADE1Q6IE81 842 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 C16orf59Q7L2K0 433 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 TMEM130Q8N3G9 435 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 EPS8L1Q8TE68 723 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 SLC20A1Q8WUM9 679 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 GOLGA1Q92805 767 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 HTATIP2Q9BUP3 242 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 APOL6Q9BWW8 343 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 SNX12Q9UMY4 172 aa13.37□□□□□ -0.27
SMAD3-204ENST00000540846 SCN1AP35498 2009 aa13.36□□□□□ -0.27
SMAD3-204ENST00000540846 TNRC18O15417 2968 aaPredicted RBP13.36□□□□□ -0.27
SMAD3-204ENST00000540846 TMEM253P0C7T8 217 aa13.36□□□□□ -0.27
SMAD3-204ENST00000540846 KCNE1P15382 129 aa13.36□□□□□ -0.27
SMAD3-204ENST00000540846 BIRC3Q13489 604 aa13.36□□□□□ -0.27
SMAD3-204ENST00000540846 IFI16Q16666 785 aaKnown RBP13.36□□□□□ -0.27
SMAD3-204ENST00000540846 TMEM199Q8N511 208 aa13.36□□□□□ -0.27
SMAD3-204ENST00000540846 TATDN2Q93075 761 aa13.36□□□□□ -0.27
SMAD3-204ENST00000540846 ZFP42Q96MM3 310 aa13.36□□□□□ -0.27
SMAD3-204ENST00000540846 PI4K2AQ9BTU6 479 aa13.36□□□□□ -0.27
SMAD3-204ENST00000540846 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.36□□□□□ -0.278e-7■■■■■ 269.8
SMAD3-204ENST00000540846 KLK14Q9P0G3 267 aa13.36□□□□□ -0.27
SMAD3-204ENST00000540846 C2CD2Q9Y426 696 aa13.36□□□□□ -0.27
SMAD3-204ENST00000540846 GRID2IPA4D2P6 1211 aa13.35□□□□□ -0.27
SMAD3-204ENST00000540846 CEP290O15078 2479 aa13.35□□□□□ -0.27
SMAD3-204ENST00000540846 PALMO75781 387 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms