RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 ZNF177Q13360 481 aaPredicted RBP14.98□□□□□ -0.01
COLCA1-204ENST00000540738 DGKZQ13574 1117 aa14.98□□□□□ -0.01
COLCA1-204ENST00000540738 MMS22LQ6ZRQ5 1243 aa14.98□□□□□ -0.01
COLCA1-204ENST00000540738 MTMR14Q8NCE2 650 aa14.98□□□□□ -0.01
COLCA1-204ENST00000540738 USP13Q92995 863 aaPredicted RBP14.98□□□□□ -0.01
COLCA1-204ENST00000540738 TAF6LQ9Y6J9 622 aa14.98□□□□□ -0.01
COLCA1-204ENST00000540738 MTSS1O43312 755 aa14.98□□□□□ -0.01
COLCA1-204ENST00000540738 TMCC1O94876 653 aa14.98□□□□□ -0.01
COLCA1-204ENST00000540738 YWHAHQ04917 246 aaPredicted RBP14.98□□□□□ -0.01
COLCA1-204ENST00000540738 CUL2Q13617 745 aa14.98□□□□□ -0.01
COLCA1-204ENST00000540738 VSIG10LQ86VR7 867 aa14.98□□□□□ -0.01
COLCA1-204ENST00000540738 CLMNQ96JQ2 1002 aa14.98□□□□□ -0.01
COLCA1-204ENST00000540738 DEFB118Q96PH6 123 aa14.98□□□□□ -0.01
COLCA1-204ENST00000540738 ZNF212Q9UDV6 495 aa14.98□□□□□ -0.01
COLCA1-204ENST00000540738 KDM1AO60341 852 aa14.98□□□□□ -0.01
COLCA1-204ENST00000540738 GLE1Q53GS7 698 aaKnown RBP14.98□□□□□ -0.01
COLCA1-204ENST00000540738 FBXO47Q5MNV8 452 aa14.98□□□□□ -0.01
COLCA1-204ENST00000540738 SPIRE2Q8WWL2 714 aa14.98□□□□□ -0.01
COLCA1-204ENST00000540738 MAF1Q9H063 256 aa14.98□□□□□ -0.01
COLCA1-204ENST00000540738 H0Y626 953 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 TOMM70O94826 608 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 CYP3A4P08684 503 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 GPD1P21695 349 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 ARL4DP49703 201 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 PABPC5Q96DU9 382 aaKnown RBP14.97□□□□□ -0.01
COLCA1-204ENST00000540738 L3MBTL3Q96JM7 780 aaPredicted RBP14.97□□□□□ -0.01
COLCA1-204ENST00000540738 NUF2Q9BZD4 464 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 PCDHB5Q9Y5E4 795 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 CFAP69A5D8W1 941 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 CFAP99D6REC4 459 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 DNAJC6O75061 913 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 RALBP11234 206 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 ACO1P21399 889 aaKnown RBP14.97□□□□□ -0.01
COLCA1-204ENST00000540738 DNAJB2P25686 324 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 EIF3BP55884 814 aaKnown RBP14.97□□□□□ -0.01
COLCA1-204ENST00000540738 CES5AQ6NT32 575 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 TRIM67Q6ZTA4 783 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 KRT35Q92764 455 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 ASB7Q9H672 318 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 CYP4F11Q9HBI6 524 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 PIK3R2O00459 728 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 ZNF197O14709 1029 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 NVLO15381 856 aaKnown RBP14.97□□□□□ -0.01
COLCA1-204ENST00000540738 UBA1P22314 1058 aaKnown RBP14.97□□□□□ -0.01
COLCA1-204ENST00000540738 CHRNA3P32297 505 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 ETFBP38117 255 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 P3H1Q32P28 736 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 FOPNLQ96NB1 174 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 MYO5BQ9ULV0 1848 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 PLA2G6O60733 806 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 OVOS1Q6IE37 1185 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 ZPBP2Q6X784 338 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 CENPKQ9BS16 269 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 SAYSD1Q9NPB0 183 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 NDFIP2Q9NV92 336 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 CCDC151A5D8V7 595 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 F5H5T6 163 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 ACKR2O00590 384 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 CALRP27797 417 aaKnown RBP14.97□□□□□ -0.01
COLCA1-204ENST00000540738 BCAT1P54687 386 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 ULK4Q96C45 1275 aa14.97□□□□□ -0.01
COLCA1-204ENST00000540738 UMODL1Q5DID0 1318 aa14.96□□□□□ -0.01
COLCA1-204ENST00000540738 LOC102724159A0A0B4J2E5 919 aa14.96□□□□□ -0.01
COLCA1-204ENST00000540738 SSU72P8A0A1W2PR75 194 aa14.96□□□□□ -0.01
COLCA1-204ENST00000540738 PGK1P00558 417 aa14.96□□□□□ -0.01
COLCA1-204ENST00000540738 GNRH1P01148 92 aa14.96□□□□□ -0.01
COLCA1-204ENST00000540738 PWP2Q15269 919 aaKnown RBP14.96□□□□□ -0.01
COLCA1-204ENST00000540738 KLHL38Q2WGJ6 581 aa14.96□□□□□ -0.01
COLCA1-204ENST00000540738 TTC30BQ8N4P2 665 aa14.96□□□□□ -0.01
COLCA1-204ENST00000540738 PPHLN1Q8NEY8 458 aaKnown RBP14.96□□□□□ -0.01
COLCA1-204ENST00000540738 ZNF558Q96NG5 402 aa14.96□□□□□ -0.01
COLCA1-204ENST00000540738 NMRK2Q9NPI5 230 aa14.96□□□□□ -0.01
COLCA1-204ENST00000540738 UXTQ9UBK9 157 aaPredicted RBP14.96□□□□□ -0.01
COLCA1-204ENST00000540738 SSTR3P32745 418 aaPredicted RBP14.96□□□□□ -0.01
COLCA1-204ENST00000540738 PDK1Q15118 436 aa14.96□□□□□ -0.01
COLCA1-204ENST00000540738 TTC19Q6DKK2 380 aaPredicted RBP14.96□□□□□ -0.01
COLCA1-204ENST00000540738 KSR1Q8IVT5 923 aa14.96□□□□□ -0.01
COLCA1-204ENST00000540738 FBXL16Q8N461 479 aa14.96□□□□□ -0.01
COLCA1-204ENST00000540738 MSL3Q8N5Y2 521 aaKnown RBP14.96□□□□□ -0.01
COLCA1-204ENST00000540738 CPA5Q8WXQ8 436 aa14.96□□□□□ -0.01
COLCA1-204ENST00000540738 MTMR12Q9C0I1 747 aa14.96□□□□□ -0.01
COLCA1-204ENST00000540738 MED4Q9NPJ6 270 aa14.96□□□□□ -0.01
COLCA1-204ENST00000540738 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.96□□□□□ -0.01
COLCA1-204ENST00000540738 ABCC6O95255 1503 aa14.96□□□□□ -0.01
COLCA1-204ENST00000540738 C2orf54Q08AI8 447 aa14.96□□□□□ -0.01
COLCA1-204ENST00000540738 CACNA2D3Q8IZS8 1091 aa14.96□□□□□ -0.01
COLCA1-204ENST00000540738 SYNDIG1Q9H7V2 258 aa14.96□□□□□ -0.01
COLCA1-204ENST00000540738 SARS2Q9NP81 518 aaKnown RBP14.96□□□□□ -0.01
COLCA1-204ENST00000540738 TMEM247A6NEH6 219 aa14.96□□□□□ -0.02
COLCA1-204ENST00000540738 ARHGAP42A6NI28 874 aa14.96□□□□□ -0.02
COLCA1-204ENST00000540738 ONECUT3O60422 494 aaPredicted RBP14.96□□□□□ -0.02
COLCA1-204ENST00000540738 PARNO95453 639 aaKnown RBP14.96□□□□□ -0.02
COLCA1-204ENST00000540738 PAX3P23760 479 aa14.96□□□□□ -0.02
COLCA1-204ENST00000540738 NSUN2Q08J23 767 aaKnown RBP eCLIP14.96□□□□□ -0.02
COLCA1-204ENST00000540738 MEI1Q5TIA1 1274 aa14.96□□□□□ -0.02
COLCA1-204ENST00000540738 HERC6Q8IVU3 1022 aa14.96□□□□□ -0.02
COLCA1-204ENST00000540738 SCFD1Q8WVM8 642 aa14.96□□□□□ -0.02
COLCA1-204ENST00000540738 TMEM51Q9NW97 253 aa14.96□□□□□ -0.02
COLCA1-204ENST00000540738 SLC30A1Q9Y6M5 507 aa14.96□□□□□ -0.02
COLCA1-204ENST00000540738 BTBD19C9JJ37 291 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms