RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 TMEM173Q86WV6 379 aaPredicted RBP11.35□□□□□ -0.59
VPS33A-204ENST00000540669 ARHGEF19Q8IW93 802 aa11.35□□□□□ -0.59
VPS33A-204ENST00000540669 RNF169Q8NCN4 708 aa11.35□□□□□ -0.59
VPS33A-204ENST00000540669 OLIG1Q8TAK6 271 aa11.35□□□□□ -0.59
VPS33A-204ENST00000540669 BCL7CQ8WUZ0 217 aaPredicted RBP11.35□□□□□ -0.59
VPS33A-204ENST00000540669 SHC3Q92529 594 aa11.35□□□□□ -0.59
VPS33A-204ENST00000540669 JAKMIP2Q96AA8 810 aa11.35□□□□□ -0.59
VPS33A-204ENST00000540669 IQCDQ96DY2 449 aa11.35□□□□□ -0.59
VPS33A-204ENST00000540669 DDX27Q96GQ7 796 aaKnown RBP11.35□□□□□ -0.59
VPS33A-204ENST00000540669 KREMEN1Q96MU8 473 aa11.35□□□□□ -0.59
VPS33A-204ENST00000540669 VN1R3Q9BXE9 311 aa11.35□□□□□ -0.59
VPS33A-204ENST00000540669 EDEM3Q9BZQ6 932 aa11.35□□□□□ -0.59
VPS33A-204ENST00000540669 NIF3L1Q9GZT8 377 aa11.35□□□□□ -0.59
VPS33A-204ENST00000540669 CACNG4Q9UBN1 327 aa11.35□□□□□ -0.59
VPS33A-204ENST00000540669 MSRAQ9UJ68 235 aa11.35□□□□□ -0.59
VPS33A-204ENST00000540669 NUB1Q9Y5A7 615 aa11.35□□□□□ -0.59
VPS33A-204ENST00000540669 MRPL42Q9Y6G3 142 aaKnown RBP11.35□□□□□ -0.59
VPS33A-204ENST00000540669 SLC4A7Q9Y6M7 1214 aa11.35□□□□□ -0.59
VPS33A-204ENST00000540669 TRIOBPQ9H2D6 2365 aa11.35□□□□□ -0.59
VPS33A-204ENST00000540669 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.34□□□□□ -0.59
VPS33A-204ENST00000540669 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.34□□□□□ -0.59
VPS33A-204ENST00000540669 CARNS1A5YM72 827 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 TBKBP1A7MCY6 615 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 F8W810 466 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 RNF225M0QZC1 329 aaPredicted RBP11.34□□□□□ -0.59
VPS33A-204ENST00000540669 PODXLO00592 558 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 ARHGEF15O94989 841 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 CYP11A1P05108 521 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 ITGB1P05556 798 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 GALTP07902 379 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 UCHL3P15374 230 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 ATP2A2P16615 1042 aaKnown RBP11.34□□□□□ -0.59
VPS33A-204ENST00000540669 HNRNPH3P31942 346 aaKnown RBP11.34□□□□□ -0.59
VPS33A-204ENST00000540669 SLC11A1P49279 550 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 LILRA4P59901 499 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 RBP5P82980 135 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 BIRC3Q13489 604 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 RAB30Q15771 203 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 PTPN21Q16825 1174 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 SGSM1Q2NKQ1 1148 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 ZNF697Q5TEC3 545 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 SPECC1LQ69YQ0 1117 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 GPR153Q6NV75 609 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 SLC39A11Q8N1S5 342 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 SPATA18Q8TC71 538 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 SUSD3Q96L08 255 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 ZNF560Q96MR9 790 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 RAD9AQ99638 391 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 CRACR2AQ9BSW2 395 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 SDCBP2Q9H190 292 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 LRFN2Q9ULH4 789 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 MYO6Q9UM54 1294 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 INPP5FQ9Y2H2 1132 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 NME7Q9Y5B8 376 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 FHOD1Q9Y613 1164 aa11.34□□□□□ -0.59
VPS33A-204ENST00000540669 LCHNA4D1U4 455 aa11.33□□□□□ -0.6
VPS33A-204ENST00000540669 CASTOR2A6NHX0 329 aa11.33□□□□□ -0.6
VPS33A-204ENST00000540669 C5orf67F2Z3F1 127 aa11.33□□□□□ -0.6
VPS33A-204ENST00000540669 TACC1O75410 805 aa11.33□□□□□ -0.6
VPS33A-204ENST00000540669 TPM3P06753 285 aa11.33□□□□□ -0.6
VPS33A-204ENST00000540669 TPM2P07951 284 aa11.33□□□□□ -0.6
VPS33A-204ENST00000540669 FAM163BP0C2L3 166 aa11.33□□□□□ -0.6
VPS33A-204ENST00000540669 TAF6P49848 677 aa11.33□□□□□ -0.6
VPS33A-204ENST00000540669 SMAD3P84022 425 aaKnown RBP11.33□□□□□ -0.6
VPS33A-204ENST00000540669 CUL2Q13617 745 aa11.33□□□□□ -0.6
VPS33A-204ENST00000540669 ZNF699Q32M78 642 aa11.33□□□□□ -0.6
VPS33A-204ENST00000540669 E4F1Q66K89 784 aaPredicted RBP11.33□□□□□ -0.6
VPS33A-204ENST00000540669 IQCEQ6IPM2 695 aa11.33□□□□□ -0.6
VPS33A-204ENST00000540669 SPOPLQ6IQ16 392 aa11.33□□□□□ -0.6
VPS33A-204ENST00000540669 DCLRE1AQ6PJP8 1040 aa11.33□□□□□ -0.6
VPS33A-204ENST00000540669 ABI1Q8IZP0 508 aa11.33□□□□□ -0.6
VPS33A-204ENST00000540669 KBTBD7Q8WVZ9 684 aa11.33□□□□□ -0.6
VPS33A-204ENST00000540669 KAT5Q92993 513 aa11.33□□□□□ -0.6
VPS33A-204ENST00000540669 HPDLQ96IR7 371 aa11.33□□□□□ -0.6
VPS33A-204ENST00000540669 NT5C1BQ96P26 610 aa11.33□□□□□ -0.6
VPS33A-204ENST00000540669 ARID3AQ99856 593 aa11.33□□□□□ -0.6
VPS33A-204ENST00000540669 SYT11Q9BT88 431 aa11.33□□□□□ -0.6
VPS33A-204ENST00000540669 PI4K2AQ9BTU6 479 aa11.33□□□□□ -0.6
VPS33A-204ENST00000540669 LSM14BQ9BX40 385 aaKnown RBP11.33□□□□□ -0.6
VPS33A-204ENST00000540669 TRIM5Q9C035 493 aa11.33□□□□□ -0.6
VPS33A-204ENST00000540669 CEP72Q9P209 647 aa11.33□□□□□ -0.6
VPS33A-204ENST00000540669 AGAP1Q9UPQ3 857 aa11.33□□□□□ -0.6
VPS33A-204ENST00000540669 INSL6Q9Y581 213 aa11.33□□□□□ -0.6
VPS33A-204ENST00000540669 TMEM265A0A087WTH1 108 aa11.32□□□□□ -0.6
VPS33A-204ENST00000540669 LINC01553A4QN01 128 aa11.32□□□□□ -0.6
VPS33A-204ENST00000540669 F8VZ95 297 aa11.32□□□□□ -0.6
VPS33A-204ENST00000540669 GABRDO14764 452 aa11.32□□□□□ -0.6
VPS33A-204ENST00000540669 NRP1O14786 923 aa11.32□□□□□ -0.6
VPS33A-204ENST00000540669 LAG3P18627 525 aa11.32□□□□□ -0.6
VPS33A-204ENST00000540669 FXR1P51114 621 aaKnown RBP eCLIP11.32□□□□□ -0.6
VPS33A-204ENST00000540669 BCAR1P56945 870 aa11.32□□□□□ -0.6
VPS33A-204ENST00000540669 CETN1Q12798 172 aa11.32□□□□□ -0.6
VPS33A-204ENST00000540669 TRIM14Q14142 442 aa11.32□□□□□ -0.6
VPS33A-204ENST00000540669 SOWAHAQ2M3V2 549 aa11.32□□□□□ -0.6
VPS33A-204ENST00000540669 SV2CQ496J9 727 aa11.32□□□□□ -0.6
VPS33A-204ENST00000540669 TIGD5Q53EQ6 642 aa11.32□□□□□ -0.6
VPS33A-204ENST00000540669 GJB7Q6PEY0 223 aa11.32□□□□□ -0.6
VPS33A-204ENST00000540669 ENOSF1Q7L5Y1 443 aa11.32□□□□□ -0.6
VPS33A-204ENST00000540669 DPH6Q7L8W6 267 aa11.32□□□□□ -0.6
VPS33A-204ENST00000540669 GPR65Q8IYL9 337 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms