RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 UNC5CO95185 931 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 ASMTLO95671 621 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 ASNSP08243 561 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 SLC18A1P54219 525 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 CLDN10P78369 228 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 MAMLD1Q13495 774 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 PGM5Q15124 567 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 WDR44Q5JSH3 913 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 GSTA5Q7RTV2 222 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 ANKS1BQ7Z6G8 1248 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 CCDC125Q86Z20 511 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 ANKLE1Q8NAG6 615 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 THOC1Q96FV9 657 aaKnown RBP13.03□□□□□ -0.32
NPC1-202ENST00000540608 VCPIP1Q96JH7 1222 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 FAM213AQ9BRX8 229 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 MOV10L1Q9BXT6 1211 aaKnown RBP13.03□□□□□ -0.32
NPC1-202ENST00000540608 RAVER2Q9HCJ3 691 aaKnown RBP13.03□□□□□ -0.32
NPC1-202ENST00000540608 TCEAL9Q9UHQ7 104 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 TRIM33Q9UPN9 1127 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 A8MUI8 341 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 EIF2AK2P19525 551 aaKnown RBP13.03□□□□□ -0.32
NPC1-202ENST00000540608 LACTBP83111 547 aaPredicted RBP13.03□□□□□ -0.32
NPC1-202ENST00000540608 ADCY1Q08828 1119 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 TMED2Q15363 201 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 P3H1Q32P28 736 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 TRIM72Q6ZMU5 477 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 TRABD2AQ86V40 505 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 TDRPQ86YL5 185 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 DENND1AQ8TEH3 1009 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 PRPF4O43172 522 aaKnown RBP eCLIP13.03□□□□□ -0.32
NPC1-202ENST00000540608 ATP5HO75947 161 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 MYCLP12524 364 aaPredicted RBP13.03□□□□□ -0.32
NPC1-202ENST00000540608 GCAP28676 217 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 DSG3P32926 999 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 ATP11AP98196 1134 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 FKBP1CQ5VVH2 108 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 PLEKHA7Q6IQ23 1121 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 FAM83AQ86UY5 434 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 FBF1Q8TES7 1133 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 TTC25Q96NG3 672 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 RAB3IPQ96QF0 476 aaPredicted RBP13.03□□□□□ -0.32
NPC1-202ENST00000540608 BATF3Q9NR55 127 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 TXLNGQ9NUQ3 528 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 ADAM22Q9P0K1 906 aa13.03□□□□□ -0.32
NPC1-202ENST00000540608 EXOC1LA0A1B0GW35 172 aa13.02□□□□□ -0.32
NPC1-202ENST00000540608 HNRNPDLO14979 420 aaKnown RBP13.02□□□□□ -0.32
NPC1-202ENST00000540608 WFS1O76024 890 aa13.02□□□□□ -0.32
NPC1-202ENST00000540608 CETN2P41208 172 aa13.02□□□□□ -0.32
NPC1-202ENST00000540608 CYP4F22Q6NT55 531 aa13.02□□□□□ -0.32
NPC1-202ENST00000540608 MIS18BP1Q6P0N0 1132 aa13.02□□□□□ -0.32
NPC1-202ENST00000540608 RGS9BPQ6ZS82 235 aa13.02□□□□□ -0.32
NPC1-202ENST00000540608 PRUNE1Q86TP1 453 aa13.02□□□□□ -0.32
NPC1-202ENST00000540608 PHF13Q86YI8 300 aaPredicted RBP13.02□□□□□ -0.32
NPC1-202ENST00000540608 ABRAQ8N0Z2 381 aa13.02□□□□□ -0.32
NPC1-202ENST00000540608 RDM1Q8NG50 284 aa13.02□□□□□ -0.32
NPC1-202ENST00000540608 CEP170P1Q96L14 293 aa13.02□□□□□ -0.32
NPC1-202ENST00000540608 PAIP2Q9BPZ3 127 aaKnown RBP13.02□□□□□ -0.32
NPC1-202ENST00000540608 C11orf70Q9BRQ4 267 aa13.02□□□□□ -0.32
NPC1-202ENST00000540608 SAYSD1Q9NPB0 183 aa13.02□□□□□ -0.32
NPC1-202ENST00000540608 CEP83Q9Y592 693 aa13.02□□□□□ -0.32
NPC1-202ENST00000540608 LIASO43766 372 aa13.02□□□□□ -0.33
NPC1-202ENST00000540608 EXTL3O43909 919 aa13.02□□□□□ -0.33
NPC1-202ENST00000540608 C4BPAP04003 597 aaKnown RBP13.02□□□□□ -0.33
NPC1-202ENST00000540608 CD58P19256 250 aa13.02□□□□□ -0.33
NPC1-202ENST00000540608 ACO1P21399 889 aaKnown RBP13.02□□□□□ -0.33
NPC1-202ENST00000540608 POLGP54098 1239 aaPredicted RBP13.02□□□□□ -0.33
NPC1-202ENST00000540608 YARSP54577 528 aaKnown RBP13.02□□□□□ -0.33
NPC1-202ENST00000540608 SOX10P56693 466 aa13.02□□□□□ -0.33
NPC1-202ENST00000540608 RPS6P62753 249 aaKnown RBP13.02□□□□□ -0.33
NPC1-202ENST00000540608 NOMO3P69849 1222 aa13.02□□□□□ -0.33
NPC1-202ENST00000540608 CCDC142Q17RM4 750 aa13.02□□□□□ -0.33
NPC1-202ENST00000540608 ZACNQ401N2 412 aa13.02□□□□□ -0.33
NPC1-202ENST00000540608 DRICH1Q6PGQ1 229 aaPredicted RBP13.02□□□□□ -0.33
NPC1-202ENST00000540608 FAM47EQ6ZV65 393 aa13.02□□□□□ -0.33
NPC1-202ENST00000540608 RCOR2Q8IZ40 523 aa13.02□□□□□ -0.33
NPC1-202ENST00000540608 ETNK1Q9HBU6 452 aa13.02□□□□□ -0.33
NPC1-202ENST00000540608 KIAA1586Q9HCI6 787 aa13.02□□□□□ -0.33
NPC1-202ENST00000540608 USTQ9Y2C2 406 aa13.02□□□□□ -0.33
NPC1-202ENST00000540608 PCDHA10Q9Y5I2 948 aa13.02□□□□□ -0.33
NPC1-202ENST00000540608 SCINQ9Y6U3 715 aa13.02□□□□□ -0.33
NPC1-202ENST00000540608 DNALI1O14645 258 aaPredicted RBP13.01□□□□□ -0.33
NPC1-202ENST00000540608 TLR3O15455 904 aaKnown RBP13.01□□□□□ -0.33
NPC1-202ENST00000540608 DIAPH2O60879 1101 aa13.01□□□□□ -0.33
NPC1-202ENST00000540608 HLA-DRAP01903 254 aa13.01□□□□□ -0.33
NPC1-202ENST00000540608 CFHP08603 1231 aa13.01□□□□□ -0.33
NPC1-202ENST00000540608 CCNG1P51959 295 aa13.01□□□□□ -0.33
NPC1-202ENST00000540608 MAP3K10Q02779 954 aa13.01□□□□□ -0.33
NPC1-202ENST00000540608 NFX1Q12986 1120 aaKnown RBP13.01□□□□□ -0.33
NPC1-202ENST00000540608 SPARCL1Q14515 664 aa13.01□□□□□ -0.33
NPC1-202ENST00000540608 NAA25Q14CX7 972 aa13.01□□□□□ -0.33
NPC1-202ENST00000540608 PSMD6Q15008 389 aa13.01□□□□□ -0.33
NPC1-202ENST00000540608 SETDB1Q15047 1291 aa13.01□□□□□ -0.33
NPC1-202ENST00000540608 PARP6Q2NL67 630 aa13.01□□□□□ -0.33
NPC1-202ENST00000540608 FAM84AQ96KN4 292 aa13.01□□□□□ -0.33
NPC1-202ENST00000540608 SENP7Q9BQF6 1050 aa13.01□□□□□ -0.33
NPC1-202ENST00000540608 MYLK2Q9H1R3 596 aa13.01□□□□□ -0.33
NPC1-202ENST00000540608 PDLIM7Q9NR12 457 aa13.01□□□□□ -0.33
NPC1-202ENST00000540608 PHTF1Q9UMS5 762 aa13.01□□□□□ -0.33
NPC1-202ENST00000540608 USH1CQ9Y6N9 552 aa13.01□□□□□ -0.33
NPC1-202ENST00000540608 NFASCO94856 1347 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms