RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 ARHGAP33O14559 1287 aa13.34□□□□□ -0.27
DDX55-206ENST00000539934 DGKIO75912 1065 aa13.34□□□□□ -0.27
DDX55-206ENST00000539934 SERPINC1P01008 464 aa13.34□□□□□ -0.27
DDX55-206ENST00000539934 ATP1A3P13637 1013 aa13.34□□□□□ -0.27
DDX55-206ENST00000539934 DDX5P17844 614 aaKnown RBP13.34□□□□□ -0.27
DDX55-206ENST00000539934 PDE4DQ08499 809 aa13.34□□□□□ -0.27
DDX55-206ENST00000539934 AP3B2Q13367 1082 aa13.34□□□□□ -0.27
DDX55-206ENST00000539934 ANKRD39Q53RE8 183 aa13.34□□□□□ -0.27
DDX55-206ENST00000539934 NAALADL2Q58DX5 795 aa13.34□□□□□ -0.27
DDX55-206ENST00000539934 ARMC4Q5T2S8 1044 aa13.34□□□□□ -0.27
DDX55-206ENST00000539934 TRMT44Q8IYL2 757 aaKnown RBP13.34□□□□□ -0.27
DDX55-206ENST00000539934 IGSF22Q8N9C0 903 aa13.34□□□□□ -0.27
DDX55-206ENST00000539934 STKLD1Q8NE28 680 aa13.34□□□□□ -0.27
DDX55-206ENST00000539934 CHURC1Q8WUH1 139 aa13.34□□□□□ -0.27
DDX55-206ENST00000539934 CALML4Q96GE6 196 aa13.34□□□□□ -0.27
DDX55-206ENST00000539934 TUBGCP5Q96RT8 1024 aa13.34□□□□□ -0.27
DDX55-206ENST00000539934 SIKE1Q9BRV8 207 aa13.34□□□□□ -0.27
DDX55-206ENST00000539934 CD93Q9NPY3 652 aa13.34□□□□□ -0.27
DDX55-206ENST00000539934 CRNNQ9UBG3 495 aaPredicted RBP13.34□□□□□ -0.27
DDX55-206ENST00000539934 LRWD1Q9UFC0 647 aa13.34□□□□□ -0.27
DDX55-206ENST00000539934 CFL2Q9Y281 166 aa13.34□□□□□ -0.27
DDX55-206ENST00000539934 PHIPQ8WWQ0 1821 aa13.34□□□□□ -0.27
DDX55-206ENST00000539934 SMCHD1A6NHR9 2005 aa13.34□□□□□ -0.27
DDX55-206ENST00000539934 A0A0J9YVX5 310 aa13.33□□□□□ -0.27
DDX55-206ENST00000539934 TLDC2A0PJX2 215 aa13.33□□□□□ -0.27
DDX55-206ENST00000539934 GRXCR2A6NFK2 248 aa13.33□□□□□ -0.27
DDX55-206ENST00000539934 LRRC72A6NJI9 287 aa13.33□□□□□ -0.27
DDX55-206ENST00000539934 CDK2AP1O14519 115 aa13.33□□□□□ -0.27
DDX55-206ENST00000539934 STRNO43815 780 aa13.33□□□□□ -0.27
DDX55-206ENST00000539934 IDH3BO43837 385 aa13.33□□□□□ -0.27
DDX55-206ENST00000539934 EDIL3O43854 480 aa13.33□□□□□ -0.27
DDX55-206ENST00000539934 MAP3K6O95382 1288 aa13.33□□□□□ -0.27
DDX55-206ENST00000539934 SYF2O95926 243 aaKnown RBP13.33□□□□□ -0.27
DDX55-206ENST00000539934 PLCG1P19174 1290 aa13.33□□□□□ -0.27
DDX55-206ENST00000539934 CCND3P30281 292 aaPredicted RBP13.33□□□□□ -0.27
DDX55-206ENST00000539934 HAAOP46952 286 aa13.33□□□□□ -0.27
DDX55-206ENST00000539934 FXR2P51116 673 aaKnown RBP eCLIP13.33□□□□□ -0.27
DDX55-206ENST00000539934 KPNA1P52294 538 aaPredicted RBP13.33□□□□□ -0.27
DDX55-206ENST00000539934 CCL14Q16627 93 aa13.33□□□□□ -0.27
DDX55-206ENST00000539934 GPR153Q6NV75 609 aa13.33□□□□□ -0.27
DDX55-206ENST00000539934 KLC3Q6P597 504 aa13.33□□□□□ -0.27
DDX55-206ENST00000539934 CORO6Q6QEF8 472 aa13.33□□□□□ -0.27
DDX55-206ENST00000539934 KIFC2Q96AC6 838 aa13.33□□□□□ -0.27
DDX55-206ENST00000539934 ALPK1Q96QP1 1244 aa13.33□□□□□ -0.27
DDX55-206ENST00000539934 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.33□□□□□ -0.27
DDX55-206ENST00000539934 ASCC2Q9H1I8 757 aaPredicted RBP13.33□□□□□ -0.27
DDX55-206ENST00000539934 CARD9Q9H257 536 aa13.33□□□□□ -0.27
DDX55-206ENST00000539934 HSD3B7Q9H2F3 369 aa13.33□□□□□ -0.27
DDX55-206ENST00000539934 VCXQ9H320 206 aa13.33□□□□□ -0.27
DDX55-206ENST00000539934 CUEDC2Q9H467 287 aa13.33□□□□□ -0.27
DDX55-206ENST00000539934 AVENQ9NQS1 362 aaPredicted RBP13.33□□□□□ -0.27
DDX55-206ENST00000539934 DSEQ9UL01 958 aa13.33□□□□□ -0.27
DDX55-206ENST00000539934 PPP1R9AQ9ULJ8 1098 aa13.33□□□□□ -0.27
DDX55-206ENST00000539934 NFE2L3Q9Y4A8 694 aa13.33□□□□□ -0.27
DDX55-206ENST00000539934 E9PMD0 336 aa13.33□□□□□ -0.28
DDX55-206ENST00000539934 MEIS2O14770 477 aa13.33□□□□□ -0.28
DDX55-206ENST00000539934 SPTLC1O15269 473 aa13.33□□□□□ -0.28
DDX55-206ENST00000539934 CTNND1O60716 968 aaKnown RBP13.33□□□□□ -0.28
DDX55-206ENST00000539934 PTPN2P17706 415 aa13.33□□□□□ -0.28
DDX55-206ENST00000539934 KRT4P19013 534 aa13.33□□□□□ -0.28
DDX55-206ENST00000539934 CDC25CP30307 473 aa13.33□□□□□ -0.28
DDX55-206ENST00000539934 GNL1P36915 607 aaPredicted RBP13.33□□□□□ -0.28
DDX55-206ENST00000539934 THOP1P52888 689 aa13.33□□□□□ -0.28
DDX55-206ENST00000539934 ATN1P54259 1190 aaPredicted RBP13.33□□□□□ -0.28
DDX55-206ENST00000539934 CEP78Q5JTW2 689 aa13.33□□□□□ -0.28
DDX55-206ENST00000539934 C6orf89Q6UWU4 347 aa13.33□□□□□ -0.28
DDX55-206ENST00000539934 ZNF600Q6ZNG1 722 aa13.33□□□□□ -0.28
DDX55-206ENST00000539934 SND1Q7KZF4 910 aaKnown RBP eCLIP13.33□□□□□ -0.28
DDX55-206ENST00000539934 NOP9Q86U38 636 aaKnown RBP13.33□□□□□ -0.28
DDX55-206ENST00000539934 CAND1Q86VP6 1230 aaKnown RBP13.33□□□□□ -0.28
DDX55-206ENST00000539934 SMYD4Q8IYR2 804 aaPredicted RBP13.33□□□□□ -0.28
DDX55-206ENST00000539934 HAPLN3Q96S86 360 aa13.33□□□□□ -0.28
DDX55-206ENST00000539934 PLEKHA5Q9HAU0 1116 aa13.33□□□□□ -0.28
DDX55-206ENST00000539934 MAGEF1Q9HAY2 307 aa13.33□□□□□ -0.28
DDX55-206ENST00000539934 LNPEPQ9UIQ6 1025 aa13.33□□□□□ -0.28
DDX55-206ENST00000539934 ITIH6Q6UXX5 1313 aa13.33□□□□□ -0.28
DDX55-206ENST00000539934 KANSL1LA0AUZ9 987 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 TRIM64A6NGJ6 449 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 TRIM64BA6NI03 449 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 NVLO15381 856 aaKnown RBP13.32□□□□□ -0.28
DDX55-206ENST00000539934 MAP3K13O43283 966 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 TAL1P17542 331 aaPredicted RBP13.32□□□□□ -0.28
DDX55-206ENST00000539934 ATF7P17544 494 aaPredicted RBP13.32□□□□□ -0.28
DDX55-206ENST00000539934 COPAP53621 1224 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 GSDMDP57764 484 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 WDR44Q5JSH3 913 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 PPP2R2DQ66LE6 453 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 PHLDB2Q86SQ0 1253 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 KLHL4Q9C0H6 718 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 SMARCAD1Q9H4L7 1026 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 TXNRD2Q9NNW7 524 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 PDP2Q9P2J9 529 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 OGDHLQ9ULD0 1010 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 GIT1Q9Y2X7 761 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 NOX1Q9Y5S8 564 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 POTEMA6NI47 508 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 GOLGA8CPA6NN73 597 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 HNRNPRO43390 633 aaKnown RBP13.32□□□□□ -0.28
DDX55-206ENST00000539934 SFTPCP11686 197 aa13.32□□□□□ -0.28
DDX55-206ENST00000539934 ALADP13716 330 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms