RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 LPIN2Q92539 896 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 ESR2Q92731 530 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 ARHGEF2Q92974 986 aaKnown RBP6.47□□□□□ -1.37
SNHG1-211ENST00000539921 HPS3Q969F9 1004 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 PGBD4Q96DM1 585 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 NLRP4Q96MN2 994 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 RMDN3Q96TC7 470 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 MIPEPQ99797 713 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 ERP44Q9BS26 406 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 METTL22Q9BUU2 404 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-211ENST00000539921 MRPL1Q9BYD6 325 aaKnown RBP6.47□□□□□ -1.37
SNHG1-211ENST00000539921 MROQ9BYG7 248 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 RUBCNLQ9H714 662 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 MAGEE1Q9HCI5 957 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 EPB41L4AQ9HCS5 686 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-211ENST00000539921 CYLDQ9NQC7 956 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 CCDC177Q9NQR7 707 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-211ENST00000539921 TAB2Q9NYJ8 693 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 KCNN3Q9UGI6 736 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 ZFP69BQ9UJL9 534 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 HAO1Q9UJM8 370 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 PTBP2Q9UKA9 531 aaKnown RBP6.47□□□□□ -1.37
SNHG1-211ENST00000539921 MKL2Q9ULH7 1088 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 TRIM33Q9UPN9 1127 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 SMG5Q9UPR3 1016 aaKnown RBP6.47□□□□□ -1.37
SNHG1-211ENST00000539921 MRPL11Q9Y3B7 192 aaKnown RBP6.47□□□□□ -1.37
SNHG1-211ENST00000539921 CEPT1Q9Y6K0 416 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 USP31Q70CQ4 1352 aa6.46□□□□□ -1.37
SNHG1-211ENST00000539921 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 TEX51A0A1B0GUA7 166 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 EVPLLA8MZ36 301 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 RSPH10B2B2RC85 870 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 AP3B1O00203 1094 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 CDK2AP1O14519 115 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 PSMA7O14818 248 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 MAGEB3O15480 346 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 GYG2O15488 501 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 PRPF4O43172 522 aaKnown RBP eCLIP6.46□□□□□ -1.38
SNHG1-211ENST00000539921 ADCY6O43306 1168 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 EXOC3O60645 756 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 EDF1O60869 148 aaKnown RBP6.46□□□□□ -1.38
SNHG1-211ENST00000539921 SIN3BO75182 1162 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 MTA2O94776 668 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 HAUS5O94927 633 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 SLC34A2O95436 690 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 GGPS1O95749 300 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 RSPH10BP0C881 870 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 ESRRAP11474 423 aaPredicted RBP6.46□□□□□ -1.38
SNHG1-211ENST00000539921 ALAS1P13196 640 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 TAC1P20366 129 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 JAK1P23458 1154 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 TARSP26639 723 aaKnown RBP6.46□□□□□ -1.38
SNHG1-211ENST00000539921 RXRGP48443 463 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 NEK3P51956 506 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 KPNA1P52294 538 aaPredicted RBP6.46□□□□□ -1.38
SNHG1-211ENST00000539921 BLVRAP53004 296 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 PPP4CP60510 307 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 OLR1P78380 273 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 S100A12P80511 92 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 RAPGEF1Q13905 1077 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 NFE2L1Q14494 772 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 KCNJ8Q15842 424 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 SLC15A2Q16348 729 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 PDK4Q16654 411 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 PTPN21Q16825 1174 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 SHROOM1Q2M3G4 852 aaPredicted RBP6.46□□□□□ -1.38
SNHG1-211ENST00000539921 MMEL1Q495T6 779 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 VWA3BQ502W6 1294 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 PPP6R3Q5H9R7 873 aaPredicted RBP6.46□□□□□ -1.38
SNHG1-211ENST00000539921 C6orf183Q5T699 404 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 KRT40Q6A162 431 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 FAM122CQ6P4D5 195 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 ZNF449Q6P9G9 518 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 CCBE1Q6UXH8 406 aaPredicted RBP6.46□□□□□ -1.38
SNHG1-211ENST00000539921 C4orf22Q6V702 233 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 DSTYKQ6XUX3 929 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 KIF6Q6ZMV9 814 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 CAND1Q86VP6 1230 aaKnown RBP6.46□□□□□ -1.38
SNHG1-211ENST00000539921 ZNF354CQ86Y25 554 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 IRF2BP1Q8IU81 584 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 RELL1Q8IUW5 271 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 VPS52Q8N1B4 723 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 CENPSQ8N2Z9 138 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 AFAP1L2Q8N4X5 818 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 DCLK2Q8N568 766 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 NEDD1Q8NHV4 660 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 HM13Q8TCT9 377 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 ADAMTS16Q8TE57 1224 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 PRPF31Q8WWY3 499 aaKnown RBP6.46□□□□□ -1.38
SNHG1-211ENST00000539921 ANKS1AQ92625 1134 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 CCDC127Q96BQ5 260 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 MTMR8Q96EF0 704 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 GIMAP5Q96F15 307 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 PAGE5Q96GU1 130 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 NSL1Q96IY1 281 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 PLEKHA8Q96JA3 519 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 DNAJC1Q96KC8 554 aaKnown RBP6.46□□□□□ -1.38
SNHG1-211ENST00000539921 TCEANC2Q96MN5 208 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 DOK1Q99704 481 aa6.46□□□□□ -1.38
SNHG1-211ENST00000539921 FERMT1Q9BQL6 677 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms